Motif ID: Pax1_Pax9

Z-value: 0.301

Transcription factors associated with Pax1_Pax9:

Gene SymbolEntrez IDGene Name
Pax1 ENSMUSG00000037034.9 Pax1
Pax9 ENSMUSG00000001497.12 Pax9



Activity profile for motif Pax1_Pax9.

activity profile for motif Pax1_Pax9


Sorted Z-values histogram for motif Pax1_Pax9

Sorted Z-values for motif Pax1_Pax9



Network of associatons between targets according to the STRING database.



First level regulatory network of Pax1_Pax9

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr2_-_36105271 1.343 ENSMUST00000112960.1
ENSMUST00000112967.5
ENSMUST00000112963.1
 Lhx6


LIM homeobox protein 6


chr12_-_90969768 0.764 ENSMUST00000181184.1
 4930544I03Rik
RIKEN cDNA 4930544I03 gene
chr3_-_117360876 0.563 ENSMUST00000061071.8
 D3Bwg0562e
DNA segment, Chr 3, Brigham & Women's Genetics 0562 expressed
chr17_-_24205514 0.364 ENSMUST00000097376.3
ENSMUST00000168410.2
ENSMUST00000167791.2
ENSMUST00000040474.7
 Tbc1d24



TBC1 domain family, member 24



chr9_-_97111117 0.360 ENSMUST00000085206.4
 Slc25a36
solute carrier family 25, member 36
chrX_+_86191764 0.290 ENSMUST00000026036.4
 Nr0b1
nuclear receptor subfamily 0, group B, member 1
chr18_+_69344503 0.280 ENSMUST00000114985.3
 Tcf4
transcription factor 4
chr2_-_33468493 0.254 ENSMUST00000113156.1
ENSMUST00000028125.5
ENSMUST00000126442.1
 Zbtb43


zinc finger and BTB domain containing 43


chr2_+_178193075 0.227 ENSMUST00000103065.1
 Phactr3
phosphatase and actin regulator 3
chr19_-_29047847 0.209 ENSMUST00000025696.4
 Ak3
adenylate kinase 3
chr11_+_83753689 0.192 ENSMUST00000001002.7
 Heatr6
HEAT repeat containing 6
chr15_-_84105662 0.191 ENSMUST00000082365.5
 Sult4a1
sulfotransferase family 4A, member 1
chr19_-_7105729 0.181 ENSMUST00000113383.2
 Flrt1
fibronectin leucine rich transmembrane protein 1
chr9_+_21337828 0.152 ENSMUST00000034697.7
 Slc44a2
solute carrier family 44, member 2
chr13_-_62777089 0.126 ENSMUST00000167516.2
 Gm5141
predicted gene 5141
chr4_+_115000174 0.124 ENSMUST00000129957.1
 Stil
Scl/Tal1 interrupting locus
chr2_+_84734050 0.106 ENSMUST00000090729.2
 Ypel4
yippee-like 4 (Drosophila)
chr5_-_31291026 0.093 ENSMUST00000041565.7
 Ift172
intraflagellar transport 172
chr7_-_24299310 0.089 ENSMUST00000145131.1
 Zfp61
zinc finger protein 61
chr4_-_110286581 0.076 ENSMUST00000138972.1
 Elavl4
ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
chr5_-_93206428 0.073 ENSMUST00000144514.1
 Ccni
cyclin I
chr4_-_143299463 0.072 ENSMUST00000119654.1
 Pdpn
podoplanin
chr13_-_62607499 0.065 ENSMUST00000091563.4
 6720489N17Rik
RIKEN cDNA 6720489N17 gene
chr9_+_96196246 0.060 ENSMUST00000165120.2
ENSMUST00000034982.9
 Tfdp2

transcription factor Dp 2

chr8_+_94838321 0.051 ENSMUST00000034234.8
ENSMUST00000159871.1
 Coq9

coenzyme Q9 homolog (yeast)

chr19_+_8840519 0.047 ENSMUST00000086058.6
 Bscl2
Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
chr8_+_31150307 0.034 ENSMUST00000098842.2
 Tti2
TELO2 interacting protein 2
chr6_-_88518760 0.032 ENSMUST00000032168.5
 Sec61a1
Sec61 alpha 1 subunit (S. cerevisiae)
chr13_-_62520451 0.025 ENSMUST00000082203.6
ENSMUST00000101547.4
 Zfp934

zinc finger protein 934


Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.3 GO:1904936 cerebral cortex GABAergic interneuron migration(GO:0021853) interneuron migration(GO:1904936)
0.1 0.4 GO:0072531 pyrimidine-containing compound transmembrane transport(GO:0072531)
0.0 0.3 GO:0035902 response to immobilization stress(GO:0035902)
0.0 0.2 GO:0006172 ADP biosynthetic process(GO:0006172)
0.0 0.4 GO:1902083 negative regulation of peptidyl-cysteine S-nitrosylation(GO:1902083)
0.0 0.3 GO:0042118 endothelial cell activation(GO:0042118)
0.0 0.1 GO:0033504 floor plate development(GO:0033504)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 GO:0042788 polysomal ribosome(GO:0042788)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.1 0.2 GO:0046899 nucleoside triphosphate adenylate kinase activity(GO:0046899)
0.0 0.4 GO:0015215 nucleotide transmembrane transporter activity(GO:0015215)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID_ERB_GENOMIC_PATHWAY Validated nuclear estrogen receptor beta network

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME_CYTOSOLIC_SULFONATION_OF_SMALL_MOLECULES Genes involved in Cytosolic sulfonation of small molecules