Motif ID: Rarb

Z-value: 0.369


Transcription factors associated with Rarb:

Gene SymbolEntrez IDGene Name
Rarb ENSMUSG00000017491.8 Rarb

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
Rarbmm10_v2_chr14_-_16575456_16575501-0.058.4e-01Click!


Activity profile for motif Rarb.

activity profile for motif Rarb


Sorted Z-values histogram for motif Rarb

Sorted Z-values for motif Rarb



Network of associatons between targets according to the STRING database.



First level regulatory network of Rarb

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_+_90203980 1.023 ENSMUST00000065587.4
ENSMUST00000159654.1
 Ackr3

atypical chemokine receptor 3

chr2_+_30281043 0.859 ENSMUST00000143119.2
 RP23-395P6.9
RP23-395P6.9
chr18_+_65582390 0.816 ENSMUST00000169679.1
ENSMUST00000183326.1
 Zfp532

zinc finger protein 532

chr7_-_116031047 0.742 ENSMUST00000106612.1
 Sox6
SRY-box containing gene 6
chr3_+_88081997 0.733 ENSMUST00000071812.5
 Iqgap3
IQ motif containing GTPase activating protein 3
chr5_+_92897981 0.633 ENSMUST00000113051.2
 Shroom3
shroom family member 3
chr1_+_191821444 0.589 ENSMUST00000027931.7
 Nek2
NIMA (never in mitosis gene a)-related expressed kinase 2
chr2_-_163417092 0.441 ENSMUST00000127038.1
 Oser1
oxidative stress responsive serine rich 1
chr8_+_36489191 0.405 ENSMUST00000171777.1
 6430573F11Rik
RIKEN cDNA 6430573F11 gene
chr8_+_106683052 0.377 ENSMUST00000048359.4
 Tango6
transport and golgi organization 6
chr3_-_52104891 0.357 ENSMUST00000121440.1
 Maml3
mastermind like 3 (Drosophila)
chr2_+_3770673 0.270 ENSMUST00000177037.1
 Fam107b
family with sequence similarity 107, member B
chr11_-_45944910 0.254 ENSMUST00000129820.1
 Lsm11
U7 snRNP-specific Sm-like protein LSM11
chr11_+_83409137 0.234 ENSMUST00000021022.3
 Rasl10b
RAS-like, family 10, member B
chr13_-_25270076 0.188 ENSMUST00000057866.6
 Nrsn1
neurensin 1
chr15_-_98662858 0.186 ENSMUST00000162384.1
ENSMUST00000003450.8
 Ddx23

DEAD (Asp-Glu-Ala-Asp) box polypeptide 23

chr10_-_92722356 0.156 ENSMUST00000020163.6
 Nedd1
neural precursor cell expressed, developmentally down-regulated gene 1
chr1_+_4807823 0.133 ENSMUST00000027036.4
ENSMUST00000119612.2
ENSMUST00000137887.1
ENSMUST00000115529.1
ENSMUST00000150971.1
 Lypla1




lysophospholipase 1




chr3_+_108186332 0.078 ENSMUST00000050909.6
ENSMUST00000106659.2
ENSMUST00000106656.1
ENSMUST00000106661.2
 Amigo1



adhesion molecule with Ig like domain 1



chr7_+_127904079 0.059 ENSMUST00000071056.7
 Bckdk
branched chain ketoacid dehydrogenase kinase
chr19_-_8786272 0.014 ENSMUST00000176610.1
ENSMUST00000177056.1
 Taf6l

TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor

chr19_-_8786245 0.011 ENSMUST00000177216.1
 Taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 GO:0030997 regulation of centriole-centriole cohesion(GO:0030997)
0.1 0.7 GO:0033601 positive regulation of mammary gland epithelial cell proliferation(GO:0033601)
0.1 0.7 GO:2000741 positive regulation of mesenchymal stem cell differentiation(GO:2000741)
0.0 0.4 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.0 0.4 GO:0007221 positive regulation of transcription of Notch receptor target(GO:0007221)
0.0 0.3 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 1.0 GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage(GO:1902230)
0.0 0.1 GO:0098734 protein depalmitoylation(GO:0002084) negative regulation of Golgi to plasma membrane protein transport(GO:0042997) negative regulation of establishment of protein localization to plasma membrane(GO:0090005) macromolecule depalmitoylation(GO:0098734)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0005683 U7 snRNP(GO:0005683)
0.0 0.2 GO:0000931 gamma-tubulin large complex(GO:0000931) gamma-tubulin ring complex(GO:0008274)
0.0 0.1 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947)
0.0 1.0 GO:0005905 clathrin-coated pit(GO:0005905)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0016494 C-X-C chemokine receptor activity(GO:0016494) C-X-C chemokine binding(GO:0019958)
0.2 0.7 GO:0032027 myosin light chain binding(GO:0032027)
0.1 0.3 GO:0071209 U7 snRNA binding(GO:0071209)
0.1 0.4 GO:0016300 tRNA (uracil) methyltransferase activity(GO:0016300)
0.0 0.1 GO:0008474 palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 PID_FOXM1_PATHWAY FOXM1 transcription factor network
0.0 0.7 PID_RAC1_PATHWAY RAC1 signaling pathway

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 REACTOME_APC_CDC20_MEDIATED_DEGRADATION_OF_NEK2A Genes involved in APC-Cdc20 mediated degradation of Nek2A
0.0 0.3 REACTOME_SLBP_DEPENDENT_PROCESSING_OF_REPLICATION_DEPENDENT_HISTONE_PRE_MRNAS Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
0.0 0.4 REACTOME_NOTCH_HLH_TRANSCRIPTION_PATHWAY Genes involved in Notch-HLH transcription pathway
0.0 0.2 REACTOME_RECRUITMENT_OF_NUMA_TO_MITOTIC_CENTROSOMES Genes involved in Recruitment of NuMA to mitotic centrosomes
0.0 0.1 REACTOME_ENOS_ACTIVATION_AND_REGULATION Genes involved in eNOS activation and regulation