Project
GNF SymAtlas + NCI-60 cancer cell lines, comparison of cancers vs non-cancers, human (Su, 2004; Ross, 2000)
Navigation
Downloads
Results for ACUGCAU
Z-value: 1.04
Motif logo
miRNA associated with seed ACUGCAU
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr12_-_109125285 Show fit | 9.73 |
ENST00000552871.1
ENST00000261401.3 |
coronin, actin binding protein, 1C |
|
| chr9_+_112810878 Show fit | 7.50 |
ENST00000434623.2
ENST00000374525.1 |
A kinase (PRKA) anchor protein 2 |
|
| chr10_-_27443155 Show fit | 7.19 |
ENST00000427324.1
ENST00000326799.3 |
YME1-like 1 ATPase |
|
| chr9_+_112542572 Show fit | 6.79 |
ENST00000374530.3
|
PALM2-AKAP2 readthrough |
|
| chr9_+_110045537 Show fit | 6.32 |
ENST00000358015.3
|
RAD23 homolog B (S. cerevisiae) |
|
| chr12_-_31479045 Show fit | 6.28 |
ENST00000539409.1
ENST00000395766.1 |
family with sequence similarity 60, member A |
|
| chr8_-_103876965 Show fit | 6.13 |
ENST00000337198.5
|
antizyme inhibitor 1 |
|
| chr10_+_54074033 Show fit | 5.55 |
ENST00000373970.3
|
dickkopf WNT signaling pathway inhibitor 1 |
|
| chr2_+_235860616 Show fit | 5.43 |
ENST00000392011.2
|
SH3-domain binding protein 4 |
|
| chr15_-_101792137 Show fit | 5.33 |
ENST00000254190.3
|
chondroitin sulfate synthase 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of ACUGCAU
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.9 | 9.2 | GO:0044387 | negative regulation of protein kinase activity by regulation of protein phosphorylation(GO:0044387) |
| 1.2 | 7.2 | GO:0035694 | mitochondrial protein catabolic process(GO:0035694) |
| 0.2 | 6.3 | GO:0000717 | nucleotide-excision repair, DNA duplex unwinding(GO:0000717) |
| 0.2 | 6.2 | GO:0006376 | mRNA splice site selection(GO:0006376) |
| 1.5 | 6.1 | GO:0033387 | putrescine biosynthetic process from ornithine(GO:0033387) |
| 1.8 | 5.5 | GO:0090244 | negative regulation of Wnt signaling pathway involved in heart development(GO:0003308) negative regulation of cell fate specification(GO:0009996) Wnt signaling pathway involved in somitogenesis(GO:0090244) |
| 0.3 | 5.5 | GO:0032486 | Rap protein signal transduction(GO:0032486) |
| 0.2 | 5.3 | GO:0045880 | positive regulation of smoothened signaling pathway(GO:0045880) |
| 0.0 | 5.1 | GO:0030336 | negative regulation of cell migration(GO:0030336) |
| 0.1 | 4.7 | GO:0043090 | amino acid import(GO:0043090) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.8 | 9.8 | GO:0016600 | flotillin complex(GO:0016600) |
| 0.0 | 8.3 | GO:0030529 | intracellular ribonucleoprotein complex(GO:0030529) |
| 0.0 | 6.8 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
| 0.4 | 6.3 | GO:0000109 | nucleotide-excision repair complex(GO:0000109) |
| 0.3 | 6.3 | GO:0016580 | Sin3 complex(GO:0016580) |
| 0.0 | 6.1 | GO:0000790 | nuclear chromatin(GO:0000790) |
| 0.1 | 5.0 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
| 0.0 | 4.8 | GO:0005905 | clathrin-coated pit(GO:0005905) |
| 0.0 | 4.8 | GO:0030175 | filopodium(GO:0030175) |
| 0.1 | 3.9 | GO:0035577 | azurophil granule membrane(GO:0035577) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 9.0 | GO:0005092 | GDP-dissociation inhibitor activity(GO:0005092) |
| 0.1 | 8.3 | GO:0048365 | Rac GTPase binding(GO:0048365) |
| 0.1 | 7.3 | GO:0003743 | translation initiation factor activity(GO:0003743) |
| 0.9 | 7.2 | GO:0004176 | ATP-dependent peptidase activity(GO:0004176) |
| 0.1 | 6.8 | GO:0019003 | GDP binding(GO:0019003) |
| 0.9 | 6.6 | GO:0050815 | phosphoserine binding(GO:0050815) |
| 0.5 | 6.3 | GO:1990247 | N6-methyladenosine-containing RNA binding(GO:1990247) |
| 0.1 | 6.3 | GO:0031593 | polyubiquitin binding(GO:0031593) |
| 0.9 | 6.1 | GO:0042978 | ornithine decarboxylase activator activity(GO:0042978) |
| 0.5 | 5.5 | GO:0039706 | co-receptor binding(GO:0039706) |
Gene overrepresentation in C2:CP category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 9.4 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
| 0.1 | 8.1 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
| 0.2 | 6.8 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
| 0.1 | 3.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
| 0.1 | 3.3 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
| 0.0 | 3.1 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
| 0.0 | 3.0 | PID PLK1 PATHWAY | PLK1 signaling events |
| 0.1 | 2.0 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
| 0.0 | 2.0 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
| 0.0 | 1.8 | PID MTOR 4PATHWAY | mTOR signaling pathway |
Gene overrepresentation in C2:CP:REACTOME category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 7.5 | REACTOME SIGNALING BY ROBO RECEPTOR | Genes involved in Signaling by Robo receptor |
| 0.0 | 7.3 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
| 0.4 | 7.2 | REACTOME DESTABILIZATION OF MRNA BY BRF1 | Genes involved in Destabilization of mRNA by Butyrate Response Factor 1 (BRF1) |
| 0.1 | 6.7 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |
| 0.2 | 6.3 | REACTOME FORMATION OF INCISION COMPLEX IN GG NER | Genes involved in Formation of incision complex in GG-NER |
| 0.2 | 6.3 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
| 0.0 | 6.0 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
| 0.0 | 5.1 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |
| 0.1 | 5.0 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
| 0.3 | 4.6 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |