ISMARA results for GNF SymAtlas + NCI-60 cancer cell lines, comparison of cancers vs non-cancers, human (Su, 2004; Ross, 2000)

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

Averaging sample configuration

Sample Condition
GNF_1_721_B_lymphoblasts non-cancer
GNF_1_ADIPOCYTE non-cancer
GNF_1_AdrenalCortex non-cancer
GNF_1_adrenalgland non-cancer
GNF_1_Amygdala non-cancer
GNF_1_Appendix non-cancer
GNF_1_atrioventricularnode non-cancer
GNF_1_BM.CD105.Endothelial non-cancer
GNF_1_BM.CD33.Myeloid non-cancer
GNF_1_BM.CD34. non-cancer
GNF_1_BM.CD71.EarlyErythroid non-cancer
GNF_1_bonemarrow non-cancer
GNF_1_bronchialepithelialcells non-cancer
GNF_1_CardiacMyocytes non-cancer
GNF_1_caudatenucleus non-cancer
GNF_1_cerebellum non-cancer
GNF_1_CerebellumPeduncles non-cancer
GNF_1_ciliaryganglion non-cancer
GNF_1_CingulateCortex non-cancer
GNF_1_ColorectalAdenocarcinoma cancer
GNF_1_DRG non-cancer
GNF_1_fetalbrain non-cancer
GNF_1_fetalliver non-cancer
GNF_1_fetallung non-cancer
GNF_1_fetalThyroid non-cancer
GNF_1_globuspallidus non-cancer
GNF_1_Heart non-cancer
GNF_1_Hypothalamus non-cancer
GNF_1_kidney non-cancer
GNF_1_leukemiachronicmyelogenous.k562. cancer
GNF_1_leukemialymphoblastic.molt4. cancer
GNF_1_leukemiapromyelocytic.hl60. cancer
GNF_1_Liver non-cancer
GNF_1_Lung non-cancer
GNF_1_lymphnode non-cancer
GNF_1_lymphomaburkittsDaudi cancer
GNF_1_lymphomaburkittsRaji cancer
GNF_1_MedullaOblongata non-cancer
GNF_1_OccipitalLobe non-cancer
GNF_1_OlfactoryBulb non-cancer
GNF_1_Ovary non-cancer
GNF_1_Pancreas non-cancer
GNF_1_PancreaticIslets non-cancer
GNF_1_ParietalLobe non-cancer
GNF_1_PB.BDCA4.Dentritic_Cells non-cancer
GNF_1_PB.CD14.Monocytes non-cancer
GNF_1_PB.CD19.Bcells non-cancer
GNF_1_PB.CD4.Tcells non-cancer
GNF_1_PB.CD56.NKCells non-cancer
GNF_1_PB.CD8.Tcells non-cancer
GNF_1_Pituitary non-cancer
GNF_1_PLACENTA non-cancer
GNF_1_Pons non-cancer
GNF_1_PrefrontalCortex non-cancer
GNF_1_Prostate non-cancer
GNF_1_salivarygland non-cancer
GNF_1_SkeletalMuscle non-cancer
GNF_1_skin non-cancer
GNF_1_SmoothMuscle non-cancer
GNF_1_spinalcord non-cancer
GNF_1_subthalamicnucleus non-cancer
GNF_1_SuperiorCervicalGanglion non-cancer
GNF_1_TemporalLobe non-cancer
GNF_1_testis non-cancer
GNF_1_TestisGermCell non-cancer
GNF_1_TestisInterstitial non-cancer
GNF_1_TestisLeydigCell non-cancer
GNF_1_TestisSeminiferousTubule non-cancer
GNF_1_Thalamus non-cancer
GNF_1_thymus non-cancer
GNF_1_Thyroid non-cancer
GNF_1_TONGUE non-cancer
GNF_1_Tonsil non-cancer
GNF_1_trachea non-cancer
GNF_1_TrigeminalGanglion non-cancer
GNF_1_Uterus non-cancer
GNF_1_UterusCorpus non-cancer
GNF_1_WHOLEBLOOD non-cancer
GNF_1_WholeBrain non-cancer
GNF_2_721_B_lymphoblasts non-cancer
GNF_2_ADIPOCYTE non-cancer
GNF_2_AdrenalCortex non-cancer
GNF_2_adrenalgland non-cancer
GNF_2_Amygdala non-cancer
GNF_2_Appendix non-cancer
GNF_2_atrioventricularnode non-cancer
GNF_2_BM.CD105.Endothelial non-cancer
GNF_2_BM.CD33.Myeloid non-cancer
GNF_2_BM.CD34. non-cancer
GNF_2_BM.CD71.EarlyErythroid non-cancer
GNF_2_bonemarrow non-cancer
GNF_2_bronchialepithelialcells non-cancer
GNF_2_CardiacMyocytes non-cancer
GNF_2_caudatenucleus non-cancer
GNF_2_cerebellum non-cancer
GNF_2_CerebellumPeduncles non-cancer
GNF_2_ciliaryganglion non-cancer
GNF_2_CingulateCortex non-cancer
GNF_2_ColorectalAdenocarcinoma cancer
GNF_2_DRG non-cancer
GNF_2_fetalbrain non-cancer
GNF_2_fetalliver non-cancer
GNF_2_fetallung non-cancer
GNF_2_fetalThyroid non-cancer
GNF_2_globuspallidus non-cancer
GNF_2_Heart non-cancer
GNF_2_Hypothalamus non-cancer
GNF_2_kidney non-cancer
GNF_2_leukemiachronicmyelogenous.k562. cancer
GNF_2_leukemialymphoblastic.molt4. cancer
GNF_2_leukemiapromyelocytic.hl60. cancer
GNF_2_Liver non-cancer
GNF_2_Lung non-cancer
GNF_2_lymphnode non-cancer
GNF_2_lymphomaburkittsDaudi cancer
GNF_2_lymphomaburkittsRaji cancer
GNF_2_MedullaOblongata non-cancer
GNF_2_OccipitalLobe non-cancer
GNF_2_OlfactoryBulb non-cancer
GNF_2_Ovary non-cancer
GNF_2_Pancreas non-cancer
GNF_2_PancreaticIslets non-cancer
GNF_2_ParietalLobe non-cancer
GNF_2_PB.BDCA4.Dentritic_Cells non-cancer
GNF_2_PB.CD14.Monocytes non-cancer
GNF_2_PB.CD19.Bcells non-cancer
GNF_2_PB.CD4.Tcells non-cancer
GNF_2_PB.CD56.NKCells non-cancer
GNF_2_PB.CD8.Tcells non-cancer
GNF_2_Pituitary non-cancer
GNF_2_PLACENTA non-cancer
GNF_2_Pons non-cancer
GNF_2_PrefrontalCortex non-cancer
GNF_2_Prostate non-cancer
GNF_2_salivarygland non-cancer
GNF_2_SkeletalMuscle non-cancer
GNF_2_skin non-cancer
GNF_2_SmoothMuscle non-cancer
GNF_2_spinalcord non-cancer
GNF_2_subthalamicnucleus non-cancer
GNF_2_SuperiorCervicalGanglion non-cancer
GNF_2_TemporalLobe non-cancer
GNF_2_testis non-cancer
GNF_2_TestisGermCell non-cancer
GNF_2_TestisInterstitial non-cancer
GNF_2_TestisLeydigCell non-cancer
GNF_2_TestisSeminiferousTubule non-cancer
GNF_2_Thalamus non-cancer
GNF_2_thymus non-cancer
GNF_2_Thyroid non-cancer
GNF_2_TONGUE non-cancer
GNF_2_Tonsil non-cancer
GNF_2_trachea non-cancer
GNF_2_TrigeminalGanglion non-cancer
GNF_2_Uterus non-cancer
GNF_2_UterusCorpus non-cancer
GNF_2_WHOLEBLOOD non-cancer
GNF_2_WholeBrain non-cancer
NCI60_1_786.0 cancer
NCI60_1_A498 cancer
NCI60_1_A549_ATCC cancer
NCI60_1_ACHN cancer
NCI60_1_BT.549 cancer
NCI60_1_CAKI.1 cancer
NCI60_1_CCRF.CEM cancer
NCI60_1_COLO205 cancer
NCI60_1_DU.145 cancer
NCI60_1_EKVX cancer
NCI60_1_HCC.2998 cancer
NCI60_1_HCT.116 cancer
NCI60_1_HCT.15 cancer
NCI60_1_HL.60 cancer
NCI60_1_HOP.62 cancer
NCI60_1_HOP.92 cancer
NCI60_1_HS578T cancer
NCI60_1_HT29 cancer
NCI60_1_IGROV1_rep1 cancer
NCI60_1_IGROV1_rep2 cancer
NCI60_1_K.562 cancer
NCI60_1_KM12 cancer
NCI60_1_LOXIMVI cancer
NCI60_1_M14 cancer
NCI60_1_MALME.3M cancer
NCI60_1_MCF7 cancer
NCI60_1_MDA.MB.231_ATCC cancer
NCI60_1_MDA.MB.435 cancer
NCI60_1_MDA.N cancer
NCI60_1_MOLT.4 cancer
NCI60_1_NCI.ADR.RES cancer
NCI60_1_NCI.H226 cancer
NCI60_1_NCI.H322M cancer
NCI60_1_NCI.H460 cancer
NCI60_1_NCI.H522 cancer
NCI60_1_OVCAR.3 cancer
NCI60_1_OVCAR.4 cancer
NCI60_1_OVCAR.5 cancer
NCI60_1_OVCAR.8 cancer
NCI60_1_PC.3 cancer
NCI60_1_RPMI.8226 cancer
NCI60_1_RXF.393 cancer
NCI60_1_SF.268 cancer
NCI60_1_SF.295 cancer
NCI60_1_SF.539 cancer
NCI60_1_SK.MEL.28 cancer
NCI60_1_SK.MEL.2 cancer
NCI60_1_SK.MEL.5 cancer
NCI60_1_SK.OV.3 cancer
NCI60_1_SN12C cancer
NCI60_1_SNB.19 cancer
NCI60_1_SNB.75 cancer
NCI60_1_SR cancer
NCI60_1_SW.620 cancer
NCI60_1_T47D cancer
NCI60_1_TK.10 cancer
NCI60_1_U251 cancer
NCI60_1_UACC.257 cancer
NCI60_1_UACC.62 cancer
NCI60_1_UO.31 cancer

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ 2.047 YBX1
FOS
NFYC
NFYA
NFYB
CEBPZ
WRNIP1 2.013 WRNIP1
MXI1_MYC_MYCN 1.987 MXI1
MYC
MYCN
ZNF143 1.965 ZNF143
RFX3_RFX2 1.782 RFX3
RFX2
MYBL2 1.771 MYBL2
E2F7_E2F1 1.766 E2F7
E2F1
MAX_TFEB 1.760 MAX
TFEB
E2F3 1.759 E2F3
ZNF784 1.759 ZNF784
E2F2_E2F5 1.759 E2F2
E2F5
CUX2 1.751 CUX2
UUGGCAC 1.718 hsa-miR-96-5p
hsa-miR-1271-5p
KLF8 1.691 KLF8
ELK4_ETV5_ELK1_ELK3_ELF4 1.690 ELK4
ETV5
ELK1
ELK3
ELF4
ZBTB33_CHD2 1.640 ZBTB33
CHD2
TAL1 1.619 TAL1
FOXO4 1.606 FOXO4
BHLHE40 1.604 BHLHE40
FLI1 1.592 FLI1
AAAGUGC 1.578 hsa-miR-17-5p
hsa-miR-20a-5p
hsa-miR-20b-5p
hsa-miR-93-5p
hsa-miR-106a-5p
hsa-miR-106b-5p
hsa-miR-519d-3p
hsa-miR-526b-3p
NRF1 1.578 NRF1
CXXC1 1.557 CXXC1
TBX5 1.452 TBX5
ISX 1.448 ISX
ZBTB14 1.433 ZBTB14
OSR1_OSR2 1.428 OSR1
OSR2
E2F8 1.414 E2F8
WT1_MTF1_ZBTB7B 1.407 WT1
MTF1
ZBTB7B
ARNT 1.407 ARNT
GMEB2 1.398 GMEB2
BPTF 1.386 BPTF
SMAD2 1.379 SMAD2
ZIC2_GLI1 1.364 ZIC2
GLI1
PITX3 1.364 PITX3
SPDEF 1.361 SPDEF
ELF2_GABPA_ELF5 1.358
CREB1 1.358 CREB1
GGCUCAG 1.356 hsa-miR-24-3p
OTX1 1.354 OTX1
ATF2_ATF1_ATF3 1.350 ATF2
ATF1
ATF3
RORA 1.348 RORA
NFIX_NFIB 1.335 NFIX
NFIB
HOXC11 1.327 HOXC11
ZNF711_TFAP2A_TFAP2D 1.322 ZNF711
TFAP2A
TFAP2D
SP3 1.320 SP3
AUAAAGU 1.312 hsa-miR-142-5p
hsa-miR-5590-3p
REST 1.298 REST
RCOR1_MTA3 1.292 RCOR1
MTA3
VAX2_RHOXF2 1.280 VAX2
RHOXF2
RFX7_RFX4_RFX1 1.276 RFX7
RFX4
RFX1
AGCCCUU 1.274 hsa-miR-129-1-3p
hsa-miR-129-2-3p
MEF2D_MEF2A 1.272 MEF2D
MEF2A
EPAS1_BCL3 1.262 EPAS1
BCL3
CUX1 1.259 CUX1
EBF1 1.257 EBF1
NKX2-2 1.240 NKX2-2
IRX3 1.223 IRX3
MSX1 1.221 MSX1
ETV3 1.220 ETV3
NR4A2 1.208 NR4A2
NR1H4 1.206 NR1H4
YY1_YY2 1.192 YY1
YY2
NFIL3 1.188 NFIL3
HSF4 1.187 HSF4
ZNF384 1.181 ZNF384
BACH2 1.172 BACH2
VSX1 1.163 VSX1
NR3C1 1.159 NR3C1
PTF1A 1.150 PTF1A
CLOCK 1.146 CLOCK
BACH1_NFE2_NFE2L2 1.141 BACH1
NFE2
NFE2L2
HIC1 1.139 HIC1
BARHL1 1.135 BARHL1
HOMEZ 1.134 HOMEZ
HOXB8 1.121 HOXB8
FOXQ1 1.114 FOXQ1
KLF6 1.107 KLF6
DLX3_EVX1_MEOX1 1.102 DLX3
EVX1
MEOX1
PAX5 1.094 PAX5
HOXC13 1.093 HOXC13
AUGGCAC 1.090 hsa-miR-183-5p.1
MECP2 1.084 MECP2
RUNX1_RUNX2 1.082 RUNX1
RUNX2
HMX3 1.078 HMX3
AACCUGG 1.076 hsa-miR-490-3p
POU3F2 1.074 POU3F2
MYB 1.072 MYB
SOX7 1.071 SOX7
SOX7
ZFX 1.069 ZFX
TAF1 1.068 TAF1
TFAP2E 1.063 TFAP2E
TEAD4 1.057 TEAD4
MNT_HEY1_HEY2 1.051 MNT
HEY1
HEY2
PLAG1 1.051 PLAG1
EOMES 1.050 EOMES
ZNF274 1.041 ZNF274
FOXK1_FOXP2_FOXB1_FOXP3 1.041 FOXK1
FOXP2
FOXB1
FOXP3
ACUGCAU 1.038 hsa-miR-217
hsa-miR-6807-3p
ZNF232 1.036 ZNF232
TGIF1 1.035 TGIF1
CTCF_CTCFL 1.032 CTCF
CTCFL
TBX4 1.026 TBX4
SRY 1.022 SRY
KLF7 1.015 KLF7
HMX2 1.010 HMX2
NFIA 1.009 NFIA
MECOM 1.004 MECOM
SMAD1 1.001 SMAD1
MSX2 1.001 MSX2
ERG 0.995 ERG
ZIC1 0.993 ZIC1
TFCP2 0.989 TFCP2
PLAGL1 0.985 PLAGL1
MEIS2 0.984 MEIS2
TP73 0.981 TP73
TBX21_TBR1 0.976 TBX21
TBR1
FOXJ2 0.973 FOXJ2
GAGAUGA 0.972 hsa-miR-143-3p
hsa-miR-4770
hsa-miR-6088
HBP1 0.969 HBP1
GAGGUAG 0.969 hsa-let-7a-5p
hsa-let-7b-5p
hsa-let-7c-5p
hsa-let-7d-5p
hsa-let-7e-5p
hsa-let-7f-5p
hsa-let-7g-5p
hsa-let-7i-5p
hsa-miR-98-5p
hsa-miR-4458
hsa-miR-4500
GGCAGUG 0.968 hsa-miR-34a-5p
hsa-miR-34c-5p
hsa-miR-449a
hsa-miR-449b-5p
PITX2 0.957 PITX2
KLF13 0.951 KLF13
HINFP1 0.950
HOXC10_HOXD13 0.949 HOXC10
HOXD13
SMAD4 0.945 SMAD4
ZKSCAN3 0.944 ZKSCAN3
PAX7_NOBOX 0.944 PAX7
NOBOX
FOXD1_FOXO1_FOXO6_FOXG1_FOXP1 0.942 FOXD1
FOXO1
FOXO6
FOXG1
FOXP1
GLIS1 0.942 GLIS1
STAT4 0.940 STAT4
MAFA 0.940 MAFA
MIXL1_GSX1_BSX_MEOX2_LHX4 0.935 MIXL1
GSX1
BSX
MEOX2
LHX4
AGUGCAA 0.933 hsa-miR-130a-3p
hsa-miR-130b-3p
hsa-miR-301a-3p
hsa-miR-301b-3p
hsa-miR-454-3p
hsa-miR-3666
hsa-miR-4295
HESX1 0.932 HESX1
TFDP1 0.929 TFDP1
E2F4 0.928 E2F4
EZH2 0.924 EZH2
UGAAAUG 0.923
ZBTB6 0.916 ZBTB6
POU3F3_POU3F4 0.910 POU3F3
POU3F4
THRB 0.906 THRB
UCCAGUU 0.902 hsa-miR-145-5p
hsa-miR-5195-3p
CCUUGGC 0.894 hsa-miR-212-5p
PAX3 0.894 PAX3
CCUUCAU 0.892 hsa-miR-205-5p
ZBTB12 0.889 ZBTB12
ZKSCAN1 0.881 ZKSCAN1
ONECUT2_ONECUT3 0.879 ONECUT2
ONECUT3
HLF_TEF 0.878 HLF
TEF
POU5F1_POU2F3 0.877 POU5F1
POU2F3
HNF4A 0.876 HNF4A
LMX1B_MNX1_RAX2 0.876 LMX1B
MNX1
RAX2
NKX6-2 0.874 NKX6-2
GGAAUGU 0.870 hsa-miR-1-3p
hsa-miR-206
hsa-miR-613
PBX2 0.870 PBX2
TCF3_MYOG 0.870 TCF3
MYOG
GGAGUGU 0.866 hsa-miR-122-5p
SOX5 0.862 SOX5
SOX4 0.858 SOX4
GATA2 0.848 GATA2
AAUCUCU 0.847 hsa-miR-216b-5p
ZNF8 0.846 ZNF8
ZNF8
TFAP2C 0.842 TFAP2C
GLI3 0.840 GLI3
POU4F1_POU4F3 0.838 POU4F1
POU4F3
ETV6 0.836 ETV6
IRX5 0.834 IRX5
AGCAGCA 0.831 hsa-miR-15a-5p
hsa-miR-15b-5p
hsa-miR-16-5p
hsa-miR-195-5p
hsa-miR-424-5p
hsa-miR-497-5p
hsa-miR-6838-5p
TLX2 0.824 TLX2
HOXD1 0.823 HOXD1
RELB 0.819 RELB
MAF_NRL 0.819 MAF
NRL
UGUGCUU 0.816 hsa-miR-218-5p
HIF1A 0.816 HIF1A
ISL2 0.815 ISL2
FOSB 0.811 FOSB
TBX1 0.808 TBX1
POU2F2_POU3F1 0.808 POU2F2
POU3F1
CAGUAGU 0.807 hsa-miR-199a-3p
hsa-miR-199b-3p
hsa-miR-3129-5p
GATA3 0.803 GATA3
MAZ_ZNF281_GTF2F1 0.802 MAZ
ZNF281
GTF2F1
ZNF691 0.800 ZNF691
SOX11 0.790 SOX11
EN1_ESX1_GBX1 0.787 EN1
ESX1
GBX1
LHX6 0.783 LHX6
RBPJ 0.782 RBPJ
STAT5B 0.781 STAT5B
BARX1 0.780 BARX1
UACAGUA 0.780 hsa-miR-101-3p.2
SOX9 0.778 SOX9
AIRE 0.777 AIRE
FIGLA 0.776 FIGLA
CCCUGAG 0.775 hsa-miR-125a-5p
hsa-miR-125b-5p
hsa-miR-4319
ZNF350 0.774 ZNF350
SP100 0.773 SP100
NKX3-2 0.773 NKX3-2
ZNF282 0.771 ZNF282
ACUGGCC 0.771 hsa-miR-193a-3p
hsa-miR-193b-3p
ID4_TCF4_SNAI2 0.763 ID4
TCF4
SNAI2
HOXC6_HOXA7 0.763 HOXC6
HOXA7
ZNF263 0.761 ZNF263
GUCAGUU 0.760 hsa-miR-223-3p
ATF4 0.758 ATF4
DDIT3 0.753 DDIT3
TP53 0.750 TP53
ZBTB49 0.750 ZBTB49
AGCUGCC 0.749 hsa-miR-22-3p
POU4F2 0.748 POU4F2
UAUUGCU 0.747 hsa-miR-137
CUGGCUG 0.745 hsa-miR-3064-5p
hsa-miR-6504-5p
PKNOX2 0.743 PKNOX2
AGCUUAU 0.742 hsa-miR-21-5p
hsa-miR-590-5p
GFI1 0.738 GFI1
CEBPA 0.736 CEBPA
CREB3L2 0.731 CREB3L2
NR4A1 0.731 NR4A1
GUAACAG 0.730 hsa-miR-194-5p
GLIS3 0.730 GLIS3
HOXB6_PRRX2 0.722 HOXB6
PRRX2
TCF21 0.719 TCF21
RARB 0.716 RARB
SIX5_SMARCC2_HCFC1 0.714 SIX5
SMARCC2
HCFC1
NHLH1 0.713 NHLH1
BBX 0.710 BBX
NFKB1 0.709 NFKB1
HSFY2 0.709 HSFY2
ACAGUAU 0.706 hsa-miR-144-3p
ZNF35 0.702 ZNF35
PPARG 0.702 PPARG
BATF 0.701 BATF
HOXB2_UNCX_HOXD3 0.699 HOXB2
UNCX
HOXD3
RXRA_NR2F6_NR2C2 0.695 RXRA
NR2F6
NR2C2
TBX2 0.686 TBX2
NR2E1 0.685 NR2E1
AUGGCUU 0.685 hsa-miR-135a-5p
hsa-miR-135b-5p
ESRRB_ESRRG 0.678 ESRRB
ESRRG
ZNF740_ZNF219 0.676 ZNF740
ZNF219
SOX6 0.675 SOX6
RHOXF1 0.675 RHOXF1
CENPB 0.669 CENPB
HOXA1 0.668 HOXA1
ZBTB16 0.666 ZBTB16
T 0.666 T
FOXC1 0.666 FOXC1
XBP1 0.659 XBP1
KLF16_SP2 0.656 KLF16
SP2
REL 0.654 REL
NKX2-4 0.654 NKX2-4
CEBPE_CEBPD 0.653 CEBPE
CEBPD
NFAT5 0.651 NFAT5
CDC5L 0.651 CDC5L
CPEB1 0.649 CPEB1
GCAGCAU 0.647 hsa-miR-103a-3p
hsa-miR-107
NR5A2 0.645 NR5A2
OLIG1 0.644 OLIG1
GAUAUGU 0.644 hsa-miR-190a-5p
hsa-miR-190b
MEF2B 0.642 MEF2B
AGCAGCG 0.642 hsa-miR-503-5p
SOX13_SOX12 0.641 SOX13
SOX12
TCF7L2 0.637 TCF7L2
HOXB4_LHX9 0.633 HOXB4
LHX9
TP63 0.629 TP63
FUBP1 0.627 FUBP1
ATF5 0.622 ATF5
KLF14_SP8 0.621 KLF14
SP8
POU6F2 0.619 POU6F2
TBX15_MGA 0.619 TBX15
MGA
ZNF423 0.615 ZNF423
HMBOX1 0.615 HMBOX1
DUXA 0.614 DUXA
ACCCUGU 0.613 hsa-miR-10a-5p
hsa-miR-10b-5p
CAGUGCA 0.611 hsa-miR-148a-3p
hsa-miR-148b-3p
hsa-miR-152-3p
HSF2 0.611 HSF2
MESP1 0.606 MESP1
MLX_USF2_USF1_PAX2 0.604 MLX
USF2
USF1
PAX2
ZBED1 0.604 ZBED1
ZBED1
ESRRA_ESR2 0.603 ESRRA
ESR2
FOXL1 0.603 FOXL1
MAFF_MAFG 0.602 MAFF
MAFG
NKX1-2_RAX 0.601 NKX1-2
RAX
TLX1_NFIC 0.596 TLX1
NFIC
TCF12_ASCL2 0.594 TCF12
ASCL2
HIC2 0.592 HIC2
HOXB3 0.592 HOXB3
UCCCUUU 0.592 hsa-miR-204-5p
hsa-miR-211-5p
HOXB5 0.591 HOXB5
DLX1_HOXA3_BARX2 0.588 DLX1
HOXA3
BARX2
ZNF652 0.582 ZNF652
HOXB7 0.578 HOXB7
CDX1 0.574 CDX1
SIX1_SIX3_SIX2 0.572 SIX1
SIX3
SIX2
CACAGUG 0.571 hsa-miR-128-3p
hsa-miR-216a-3p
hsa-miR-3681-3p
ELF3_EHF 0.570 ELF3
EHF
ZEB1 0.565 ZEB1
PGR 0.564 PGR
UAAGGCA 0.562 hsa-miR-124-3p.2
hsa-miR-506-3p
NR1H2 0.562 NR1H2
PBX3 0.562 PBX3
FOXD3_FOXI1_FOXF1 0.559 FOXD3
FOXI1
FOXF1
HOXB13 0.559 HOXB13
AUGUGCC 0.556 hsa-miR-455-5p
GCM1 0.553 GCM1
TBP 0.552 TBP
ETV2 0.552 ETV2
PAX4 0.552 PAX4
CREB5_CREM_JUNB 0.551 CREB5
CREM
JUNB
HINFP 0.551 HINFP
HOXC8 0.550 HOXC8
MYOD1 0.545 MYOD1
SOX17 0.544 SOX17
DMBX1 0.544 DMBX1
CCACAGG 0.544 hsa-miR-140-3p.1
EGR1_EGR4 0.544 EGR1
EGR4
HOXC12_HOXD12 0.539 HOXC12
HOXD12
TCF7 0.535 TCF7
LEF1 0.535 LEF1
AAGUGCU 0.535 hsa-miR-302a-3p
hsa-miR-302b-3p
hsa-miR-302c-3p.1
hsa-miR-302d-3p
hsa-miR-302e
hsa-miR-372-3p
hsa-miR-373-3p
hsa-miR-520a-3p
hsa-miR-520b
hsa-miR-520c-3p
hsa-miR-520d-3p
hsa-miR-520e
SREBF1_TFE3 0.534 SREBF1
TFE3
ZNF333 0.532 ZNF333
EMX1 0.531 EMX1
CREB3L1_CREB3 0.530 CREB3L1
CREB3
SPIC 0.525 SPIC
POU6F1 0.524 POU6F1
PROX1 0.523 PROX1
GGACGGA 0.522 hsa-miR-184
ETV1_ERF_FEV_ELF1 0.521 ETV1
ERF
FEV
ELF1
GRHL1 0.519 GRHL1
NOTO_VSX2_DLX2_DLX6_NKX6-1 0.515 NOTO
VSX2
DLX2
DLX6
NKX6-1
DBX2_HLX 0.514 DBX2
HLX
GSC_GSC2 0.514 GSC
GSC2
DLX4_HOXD8 0.507 DLX4
HOXD8
ESR1 0.506 ESR1
NFATC4 0.505 NFATC4
GLI2 0.501 GLI2
STAT1_STAT3_BCL6 0.499 STAT1
STAT3
BCL6
GATA1_GATA4 0.497 GATA1
GATA4
TFAP2B 0.497 TFAP2B
NR2F1 0.496 NR2F1
IRF7 0.490 IRF7
SOX14 0.489 SOX14
AACACUG 0.489 hsa-miR-141-3p
hsa-miR-200a-3p
SMAD3 0.488 SMAD3
ATF6 0.487 ATF6
NR2F2 0.486 NR2F2
FOXA1 0.485 FOXA1
UCACAUU 0.484 hsa-miR-23a-3p
hsa-miR-23b-3p
hsa-miR-23c
hsa-miR-130a-5p
GFI1B 0.484 GFI1B
AGCACCA 0.481 hsa-miR-29a-3p
hsa-miR-29b-3p
hsa-miR-29c-3p
SP1 0.481 SP1
IKZF1 0.480 IKZF1
UAGUGUU 0.478
GGCAAGA 0.477 hsa-miR-31-5p
PKNOX1_TGIF2 0.474 PKNOX1
TGIF2
CACCUCC 0.472 hsa-miR-1306-5p
GZF1 0.471 GZF1
RAD21_SMC3 0.469 RAD21
SMC3
UGCAUAG 0.464 hsa-miR-153-3p
PDX1 0.463 PDX1
SOX10_SOX15 0.463 SOX10
SOX15
GUAGUGU 0.462 hsa-miR-142-3p.1
UGACCUA 0.457 hsa-miR-192-5p
hsa-miR-215-5p
PBX1 0.452 PBX1
NR4A3 0.451 NR4A3
OTP_PHOX2B_LHX1_LMX1A_LHX5_HOXC4 0.450 OTP
PHOX2B
LHX1
LMX1A
LHX5
HOXC4
HOXC4
MLXIPL 0.450 MLXIPL
HMX1 0.449 HMX1
CBFB 0.448 CBFB
TBX19 0.447 TBX19
GATA5 0.446 GATA5
ETS1 0.446 ETS1
E2F6 0.445 E2F6
SOX3_SOX2 0.442 SOX3
SOX2
ALX1_ARX 0.442 ALX1
ARX
FOXF2_FOXJ1 0.440 FOXF2
FOXJ1
HOXA4 0.440 HOXA4
MAFK 0.434 MAFK
HOXD10 0.434 HOXD10
PAX6 0.433 PAX6
HIVEP1 0.433 HIVEP1
KLF12 0.429 KLF12
PPARD 0.423 PPARD
RELA 0.423 RELA
GUAAACA 0.422 hsa-miR-30a-5p
hsa-miR-30b-5p
hsa-miR-30c-5p
hsa-miR-30d-5p
hsa-miR-30e-5p
NR6A1 0.419 NR6A1
NFE2L1 0.415 NFE2L1
OTX2_CRX 0.410 OTX2
CRX
E4F1 0.408 E4F1
UGCAUUG 0.407 hsa-miR-33a-5p
hsa-miR-33b-5p
BRCA1 0.406 BRCA1
HNF1A_HNF1B 0.404 HNF1A
HNF1B
TBX20 0.402 TBX20
STAT5A 0.401 STAT5A
JUN 0.400 JUN
NR1I2 0.399 NR1I2
AR_NR3C2 0.398 AR
NR3C2
JUND 0.396 JUND
HOXD11_HOXA11 0.396 HOXD11
HOXA11
HOXA6 0.392 HOXA6
HNF4G 0.392 HNF4G
KLF1 0.391 KLF1
GAUUGUC 0.389 hsa-miR-219a-5p
hsa-miR-4782-3p
hsa-miR-6766-3p
FOXM1_TBL1XR1 0.385 FOXM1
TBL1XR1
ZBTB7A_ZBTB7C 0.384 ZBTB7A
ZBTB7C
PRRX1_ALX4_PHOX2A 0.383 PRRX1
ALX4
PHOX2A
HDX 0.383 HDX
ETV7 0.380 ETV7
MYBL1 0.375 MYBL1
UAAGACU 0.374 hsa-miR-499a-5p
ZNF524 0.373 ZNF524
NFATC2_NFATC3 0.369 NFATC2
NFATC3
ARID3A 0.368 ARID3A
SOX21 0.365 SOX21
ATF7 0.364 ATF7
SIX4 0.363 SIX4
SCRT1_SCRT2 0.360 SCRT1
SCRT2
SPIB 0.357 SPIB
IKZF2 0.356 IKZF2
AACAGUC 0.355 hsa-miR-132-3p
hsa-miR-212-3p
LHX8 0.355 LHX8
SOX8 0.352 SOX8
UCACAGU 0.352 hsa-miR-27a-3p
hsa-miR-27b-3p
HMGA2 0.350 HMGA2
NKX2-3 0.346 NKX2-3
EBF3 0.345 EBF3
AAUACUG 0.345 hsa-miR-200b-3p
hsa-miR-200c-3p
hsa-miR-429
NKX2-5 0.338 NKX2-5
UUGGUCC 0.337 hsa-miR-133a-3p.2
hsa-miR-133b
RARG 0.335 RARG
RXRG 0.334 RXRG
AAUCUCA 0.331 hsa-miR-216a-5p
SHOX 0.330 SHOX
SHOX
FOSL2_SMARCC1 0.321 FOSL2
SMARCC1
HOXA13 0.321 HOXA13
NKX3-1 0.316 NKX3-1
PPARA 0.315 PPARA
KLF3 0.313 KLF3
LHX3 0.312 LHX3
HOXD9 0.312 HOXD9
GCM2 0.311 GCM2
SIX6 0.311 SIX6
INSM1 0.307 INSM1
MEIS1 0.307 MEIS1
OLIG2_NEUROD1_ATOH1 0.307 OLIG2
NEUROD1
ATOH1
TBX3 0.305 TBX3
SP4_PML 0.304 SP4
PML
KLF15 0.303 KLF15
GCUGGUG 0.303 hsa-miR-138-5p
DPRX 0.299 DPRX
UGACAUC 0.299 hsa-miR-489-3p
GGAAGAC 0.293 hsa-miR-7-5p
UBP1 0.289 UBP1
GATA6 0.288 GATA6
NR1D1 0.288 NR1D1
HSF1 0.282 HSF1
GLIS2 0.281 GLIS2
ETV4_ETS2 0.280 ETV4
ETS2
MBD2 0.277 MBD2
IRF9 0.270 IRF9
DRGX_PROP1 0.270 DRGX
PROP1
CCAGUGU 0.269 hsa-miR-199a-5p
hsa-miR-199b-5p
RFX5 0.266 RFX5
SREBF2 0.263 SREBF2
LHX2 0.261 LHX2
FOSL1 0.260 FOSL1
SOX18 0.259 SOX18
RORC 0.258 RORC
CEBPG 0.256 CEBPG
CDX2 0.255 CDX2
NR2E3 0.253 NR2E3
SPI1 0.253 SPI1
NR0B1 0.253 NR0B1
HOXA2_HOXB1 0.248 HOXA2
HOXB1
FOXA3_FOXC2 0.246 FOXA3
FOXC2
OVOL1 0.243 OVOL1
SHOX2_HOXC5 0.239 SHOX2
HOXC5
ARID5A 0.232 ARID5A
IRF2_STAT2_IRF8_IRF1 0.232 IRF2
STAT2
IRF8
IRF1
NKX1-1 0.230 NKX1-1
STAT6 0.227 STAT6
AAUGCCC 0.227 hsa-miR-365a-3p
hsa-miR-365b-3p
FOXN1 0.225 FOXN1
NKX2-8 0.225 NKX2-8
ZBTB3 0.222 ZBTB3
NKX2-6 0.222 NKX2-6
UUGGCAA 0.220 hsa-miR-182-5p
VAX1_GSX2 0.214 VAX1
GSX2
BHLHE22_BHLHA15_BHLHE23 0.214 BHLHE22
BHLHA15
BHLHE23
GCUACAU 0.212 hsa-miR-221-3p
hsa-miR-222-3p
OLIG3_NEUROD2_NEUROG2 0.208 OLIG3
NEUROD2
NEUROG2
POU1F1 0.207 POU1F1
PATZ1_KLF4 0.206 PATZ1
KLF4
MEIS3_TGIF2LX 0.204 MEIS3
TGIF2LX
HES1 0.201 HES1
JDP2 0.193 JDP2
VDR 0.192 VDR
THRA_RXRB 0.192 THRA
RXRB
ACCCGUA 0.190 hsa-miR-99a-5p
hsa-miR-99b-5p
hsa-miR-100-5p
ZBTB4 0.181 ZBTB4
PAX8 0.180 PAX8
HOXD4 0.178 HOXD4
ARID5B 0.177 ARID5B
UUGUUCG 0.177 hsa-miR-375
AHR_ARNT2 0.176 AHR
ARNT2
FOXA2_FOXJ3 0.176 FOXA2
FOXJ3
ISL1 0.176 ISL1
AACGGAA 0.175 hsa-miR-191-5p
AAGGCAC 0.173 hsa-miR-124-3p.1
MEF2C 0.171 MEF2C
HOXC9 0.171 HOXC9
ZBTB18 0.167 ZBTB18
POU2F1 0.166 POU2F1
ACAUUCA 0.163 hsa-miR-181a-5p
hsa-miR-181b-5p
hsa-miR-181c-5p
hsa-miR-181d-5p
hsa-miR-4262
CEBPB 0.159 CEBPB
HMGA1 0.159 HMGA1
CCAGCAU 0.158 hsa-miR-338-3p
ZFHX3 0.155 ZFHX3
RARA 0.154 RARA
BATF3 0.153 BATF3
AAGGUGC 0.148 hsa-miR-18a-5p
hsa-miR-18b-5p
hsa-miR-4735-3p
EGR3_EGR2 0.146 EGR3
EGR2
FOXO3_FOXD2 0.144 FOXO3
FOXD2
NR2C1 0.142 NR2C1
ALX3 0.141 ALX3
NR1I3 0.140 NR1I3
CUACAGU 0.138 hsa-miR-139-5p
ZNF410 0.132 ZNF410
SOX30 0.131 SOX30
AGGUAGU 0.126 hsa-miR-196a-5p
hsa-miR-196b-5p
IRF6_IRF4_IRF5 0.126 IRF6
IRF4
IRF5
EN2_GBX2_LBX2 0.125 EN2
GBX2
LBX2
PITX1 0.122 PITX1
TFAP4_MSC 0.118 TFAP4
MSC
ACCACAG 0.117 hsa-miR-140-3p.2
TWIST1_SNAI1 0.116 TWIST1
SNAI1
VENTX 0.116 VENTX
AUUGCAC 0.112 hsa-miR-25-3p
hsa-miR-32-5p
hsa-miR-92a-3p
hsa-miR-92b-3p
hsa-miR-363-3p
hsa-miR-367-3p
TFEC_MITF_ARNTL_BHLHE41 0.108 TFEC
MITF
ARNTL
BHLHE41
DBP 0.105 DBP
IRF3 0.105 IRF3
SOX1 0.102 SOX1
PAX1_PAX9 0.100 PAX1
PAX9
PRDM4 0.100 PRDM4
BCL6B 0.094 BCL6B
GUGCAAA 0.090 hsa-miR-19a-3p
hsa-miR-19b-3p
IRX2 0.088 IRX2
UGGUCCC 0.087 hsa-miR-133a-3p.1
TCF7L1 0.085 TCF7L1
GTF2I 0.085 GTF2I
NFKB2 0.082 NFKB2
UGGCACU 0.082
ONECUT1 0.080 ONECUT1
NKX6-3 0.078 NKX6-3
UUUUUGC 0.077 hsa-miR-129-5p
ZSCAN4 0.077 ZSCAN4
AGUGCUU 0.076 hsa-miR-302c-3p.2
hsa-miR-520f-3p
MZF1 0.075 MZF1
AGUGGUU 0.075 hsa-miR-140-5p
NANOG 0.074 NANOG
HOXA10_HOXB9 0.074 HOXA10
HOXB9
TEAD3_TEAD1 0.073 TEAD3
TEAD1
PRDM1 0.069 PRDM1
EVX2 0.069 EVX2
CUUUGGU 0.068 hsa-miR-9-5p
HAND1 0.068 HAND1
HOXA9 0.066 HOXA9
ZNF148 0.066 ZNF148
IRX6_IRX4 0.064 IRX6
IRX4
HOXA5 0.062 HOXA5
GAGAACU 0.062 hsa-miR-146a-5p
hsa-miR-146b-5p
hsa-miR-7153-5p
AGAUCAG 0.060 hsa-miR-383-5p.2
AUGACAC 0.060 hsa-miR-425-5p
NKX2-1 0.057 NKX2-1
GCCUGUC 0.055 hsa-miR-214-5p
GAUCAGA 0.047 hsa-miR-383-5p.1
MAFB 0.044 MAFB
EP300 0.043 EP300
PRDM14 0.041 PRDM14
ACAGUAC 0.040 hsa-miR-101-3p.1
UAAGACG 0.040 hsa-miR-208a-3p
hsa-miR-208b-3p
DLX5 0.038 DLX5
UGCAGUC 0.038 hsa-miR-455-3p.2
SIN3A_CHD1 0.037 SIN3A
CHD1
CGUACCG 0.032 hsa-miR-126-3p.1
DMC1 0.031 DMC1
RUNX3_BCL11A 0.026 RUNX3
BCL11A
NFATC1 0.026 NFATC1
TFCP2L1 0.025 TFCP2L1
SRF 0.025 SRF
EMX2 0.018 EMX2
CAGUCCA 0.016 hsa-miR-455-3p.1
AACCGUU 0.016 hsa-miR-451a
CGUGUCU 0.015 hsa-miR-187-3p
MYF6 0.015 MYF6
GMEB1 0.013 GMEB1
GUACCGU 0.013 hsa-miR-126-3p.2
HES7_HES5 0.011 HES7
HES5
ZIC3_ZIC4 0.011 ZIC3
ZIC4
RREB1 0.010 RREB1
BARHL2 0.010 BARHL2
UGUGCGU 0.007 hsa-miR-210-3p
UAAUGCU 0.001 hsa-miR-155-5p

All samples sorted alphabetically


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Sample name Condition Replicate/Batch
non-cancer
cancer