ISMARA results for Epithelial-Mesenchymal Transition, human (Scheel, 2011): : averaged replicates

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

Link to original results

Averaging sample configuration

Sample Condition
01_GSM710379_01_HMLE-24hi_a Epithelial
02_GSM710383_05_HMLE-24hi_b Epithelial
03_GSM710380_02_HMLE-msp1_a Mesenchymal
04_GSM710381_03_HMLE-msp2_a Mesenchymal
05_GSM710382_04_HMLE-msp3_a Mesenchymal
06_GSM710384_06_HMLE-msp1_b Mesenchymal
07_GSM710385_07_HMLE-msp2_b Mesenchymal
08_GSM710386_08_HMLE-msp3_b Mesenchymal

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
ZEB1 12.402 ZEB1
ID4_TCF4_SNAI2 4.776 ID4
TCF4
SNAI2
MXI1_MYC_MYCN 4.033 MXI1
MYC
MYCN
TFAP2C 3.531 TFAP2C
HOXB6_PRRX2 3.390 HOXB6
PRRX2
IKZF1 3.280 IKZF1
FOSL1 3.253 FOSL1
ELK4_ETV5_ELK1_ELK3_ELF4 3.217 ELK4
ETV5
ELK1
ELK3
ELF4
KLF1 3.175 KLF1
TWIST1_SNAI1 3.091 TWIST1
SNAI1
CCCUGAG 2.839 hsa-miR-125a-5p
hsa-miR-125b-5p
hsa-miR-4319
MLX_USF2_USF1_PAX2 2.815 MLX
USF2
USF1
PAX2
BARHL1 2.719 BARHL1
MEIS2 2.646 MEIS2
ETV2 2.597 ETV2
WRNIP1 2.542 WRNIP1
TAF1 2.504 TAF1
ATF6 2.484 ATF6
SIN3A_CHD1 2.483 SIN3A
CHD1
AGCAGCA 2.471 hsa-miR-15a-5p
hsa-miR-15b-5p
hsa-miR-16-5p
hsa-miR-195-5p
hsa-miR-424-5p
hsa-miR-497-5p
hsa-miR-6838-5p
LEF1 2.412 LEF1
HOXB8 2.369 HOXB8
HINFP 2.352 HINFP
RARG 2.327 RARG
AGCAGCG 2.298 hsa-miR-503-5p
CUX1 2.249 CUX1
EPAS1_BCL3 2.213 EPAS1
BCL3
IRF7 2.186 IRF7
NR0B1 2.117 NR0B1
NRF1 2.067 NRF1
MYBL1 2.047 MYBL1
HOXB3 2.043 HOXB3
HSF1 2.042 HSF1
AGCACCA 2.040 hsa-miR-29a-3p
hsa-miR-29b-3p
hsa-miR-29c-3p
GLI3 2.035 GLI3
SRF 2.024 SRF
AGUGCAA 2.023 hsa-miR-130a-3p
hsa-miR-130b-3p
hsa-miR-301a-3p
hsa-miR-301b-3p
hsa-miR-454-3p
hsa-miR-3666
hsa-miR-4295
CEBPA 2.019 CEBPA
TCF3_MYOG 2.006 TCF3
MYOG
NFATC4 2.005 NFATC4
HIVEP1 1.947 HIVEP1
TFAP2B 1.907 TFAP2B
E2F3 1.865 E2F3
MAZ_ZNF281_GTF2F1 1.863 MAZ
ZNF281
GTF2F1
HOXC9 1.854 HOXC9
NR2E1 1.852 NR2E1
FOSB 1.847 FOSB
MAFB 1.800 MAFB
NR2E3 1.790 NR2E3
ELF3_EHF 1.784 ELF3
EHF
OLIG3_NEUROD2_NEUROG2 1.774 OLIG3
NEUROD2
NEUROG2
RARB 1.766 RARB
STAT1_STAT3_BCL6 1.761 STAT1
STAT3
BCL6
AAUACUG 1.758 hsa-miR-200b-3p
hsa-miR-200c-3p
hsa-miR-429
MAFK 1.745 MAFK
GGAAUGU 1.743 hsa-miR-1-3p
hsa-miR-206
hsa-miR-613
ZBTB33_CHD2 1.743 ZBTB33
CHD2
ESRRB_ESRRG 1.741 ESRRB
ESRRG
UUGGUCC 1.698 hsa-miR-133a-3p.2
hsa-miR-133b
TGIF1 1.683 TGIF1
FOXK1_FOXP2_FOXB1_FOXP3 1.680 FOXK1
FOXP2
FOXB1
FOXP3
ESRRA_ESR2 1.679 ESRRA
ESR2
TP63 1.678 TP63
TBP 1.672 TBP
PRRX1_ALX4_PHOX2A 1.668 PRRX1
ALX4
PHOX2A
GLI2 1.656 GLI2
YY1_YY2 1.640 YY1
YY2
MEIS1 1.630 MEIS1
CXXC1 1.620 CXXC1
XBP1 1.615 XBP1
HOXA5 1.608 HOXA5
GATA2 1.600 GATA2
FOSL2_SMARCC1 1.585 FOSL2
SMARCC1
AHR_ARNT2 1.574 AHR
ARNT2
HES1 1.573 HES1
STAT5B 1.566 STAT5B
AUUGCAC 1.558 hsa-miR-25-3p
hsa-miR-32-5p
hsa-miR-92a-3p
hsa-miR-92b-3p
hsa-miR-363-3p
hsa-miR-367-3p
TP53 1.557 TP53
BHLHE22_BHLHA15_BHLHE23 1.554 BHLHE22
BHLHA15
BHLHE23
SPIB 1.554 SPIB
GRHL1 1.531 GRHL1
FOXL1 1.529 FOXL1
UGGUCCC 1.526 hsa-miR-133a-3p.1
SPIC 1.516 SPIC
ZBTB6 1.511 ZBTB6
ALX3 1.481 ALX3
PAX6 1.478 PAX6
FOXO3_FOXD2 1.458 FOXO3
FOXD2
MZF1 1.457 MZF1
GATA1_GATA4 1.455 GATA1
GATA4
PRDM1 1.453 PRDM1
ARID3A 1.453 ARID3A
GCUACAU 1.445 hsa-miR-221-3p
hsa-miR-222-3p
MECOM 1.438 MECOM
NKX2-6 1.434 NKX2-6
SPI1 1.428 SPI1
CUX2 1.425 CUX2
YBX1_FOS_NFYC_NFYA_NFYB_CEBPZ 1.387 YBX1
FOS
NFYC
NFYA
NFYB
CEBPZ
SMAD1 1.383 SMAD1
CEBPE_CEBPD 1.365 CEBPE
CEBPD
NKX3-2 1.364 NKX3-2
IKZF2 1.358 IKZF2
MBD2 1.357 MBD2
POU3F2 1.355 POU3F2
ZNF143 1.350 ZNF143
DPRX 1.343 DPRX
MIXL1_GSX1_BSX_MEOX2_LHX4 1.340 MIXL1
GSX1
BSX
MEOX2
LHX4
TFAP4_MSC 1.338 TFAP4
MSC
MAFF_MAFG 1.336 MAFF
MAFG
SOX8 1.326 SOX8
NR5A2 1.320 NR5A2
TBX21_TBR1 1.307 TBX21
TBR1
ZNF691 1.302 ZNF691
UCCAGUU 1.295 hsa-miR-145-5p
hsa-miR-5195-3p
MSX1 1.287 MSX1
AIRE 1.279 AIRE
TBX1 1.276 TBX1
ZBTB12 1.268 ZBTB12
GZF1 1.255 GZF1
AACACUG 1.255 hsa-miR-141-3p
hsa-miR-200a-3p
NKX1-2_RAX 1.252 NKX1-2
RAX
IRF6_IRF4_IRF5 1.250 IRF6
IRF4
IRF5
NFATC2_NFATC3 1.240 NFATC2
NFATC3
NHLH1 1.239 NHLH1
FOXO4 1.239 FOXO4
EBF3 1.217 EBF3
CDX2 1.215 CDX2
NFATC1 1.212 NFATC1
HOXB4_LHX9 1.211 HOXB4
LHX9
THRA_RXRB 1.202 THRA
RXRB
ZBTB16 1.202 ZBTB16
DBP 1.193 DBP
HIC2 1.186 HIC2
NFE2L1 1.183 NFE2L1
SOX17 1.166 SOX17
RFX3_RFX2 1.159 RFX3
RFX2
NR1I3 1.138 NR1I3
SOX10_SOX15 1.136 SOX10
SOX15
IRF9 1.125 IRF9
PBX1 1.118 PBX1
INSM1 1.118 INSM1
AACAGUC 1.106 hsa-miR-132-3p
hsa-miR-212-3p
IRX3 1.106 IRX3
E4F1 1.099 E4F1
PAX7_NOBOX 1.098 PAX7
NOBOX
E2F6 1.097 E2F6
PBX3 1.096 PBX3
GUAGUGU 1.095 hsa-miR-142-3p.1
JDP2 1.086 JDP2
ZNF711_TFAP2A_TFAP2D 1.085 ZNF711
TFAP2A
TFAP2D
IRF3 1.080 IRF3
ERG 1.079 ERG
ZIC1 1.078 ZIC1
MECP2 1.076 MECP2
TCF12_ASCL2 1.069 TCF12
ASCL2
MEF2B 1.059 MEF2B
FOXA2_FOXJ3 1.044 FOXA2
FOXJ3
SHOX2_HOXC5 1.039 SHOX2
HOXC5
FOXA1 1.015 FOXA1
CREB3L2 1.009 CREB3L2
HOXC12_HOXD12 1.007 HOXC12
HOXD12
GCAGCAU 1.002 hsa-miR-103a-3p
hsa-miR-107
UAAGGCA 1.001 hsa-miR-124-3p.2
hsa-miR-506-3p
OLIG2_NEUROD1_ATOH1 0.999 OLIG2
NEUROD1
ATOH1
SP3 0.989 SP3
DUXA 0.983 DUXA
HOXC8 0.979 HOXC8
ZNF740_ZNF219 0.961 ZNF740
ZNF219
SIX5_SMARCC2_HCFC1 0.954 SIX5
SMARCC2
HCFC1
PRDM14 0.951 PRDM14
MAFA 0.949 MAFA
TBX20 0.948 TBX20
PGR 0.940 PGR
REL 0.939 REL
TBX19 0.935 TBX19
UCACAUU 0.935 hsa-miR-23a-3p
hsa-miR-23b-3p
hsa-miR-23c
hsa-miR-130a-5p
HOXA4 0.926 HOXA4
AAAGUGC 0.922 hsa-miR-17-5p
hsa-miR-20a-5p
hsa-miR-20b-5p
hsa-miR-93-5p
hsa-miR-106a-5p
hsa-miR-106b-5p
hsa-miR-519d-3p
hsa-miR-526b-3p
OTP_PHOX2B_LHX1_LMX1A_LHX5_HOXC4 0.912 OTP
PHOX2B
LHX1
LMX1A
LHX5
HOXC4
HOXC4
GAUUGUC 0.912 hsa-miR-219a-5p
hsa-miR-4782-3p
hsa-miR-6766-3p
BATF 0.888 BATF
OSR1_OSR2 0.886 OSR1
OSR2
SHOX 0.879 SHOX
SHOX
EP300 0.875 EP300
SP4_PML 0.871 SP4
PML
NANOG 0.864 NANOG
MYBL2 0.864 MYBL2
OLIG1 0.860 OLIG1
ETV6 0.856 ETV6
TFEC_MITF_ARNTL_BHLHE41 0.855 TFEC
MITF
ARNTL
BHLHE41
GGAAGAC 0.854 hsa-miR-7-5p
FUBP1 0.853 FUBP1
TLX2 0.847 TLX2
NR1H2 0.846 NR1H2
RFX7_RFX4_RFX1 0.846 RFX7
RFX4
RFX1
EVX2 0.833 EVX2
HOXD1 0.832 HOXD1
HOXB7 0.826 HOXB7
BARHL2 0.820 BARHL2
AAGGCAC 0.818 hsa-miR-124-3p.1
CDC5L 0.816 CDC5L
TBX5 0.815 TBX5
EMX2 0.814 EMX2
FOXQ1 0.810 FOXQ1
ZBTB18 0.810 ZBTB18
RXRG 0.808 RXRG
RUNX3_BCL11A 0.808 RUNX3
BCL11A
ELF2_GABPA_ELF5 0.805
HOXD10 0.796 HOXD10
NR1H4 0.794 NR1H4
LHX8 0.788 LHX8
MYB 0.788 MYB
GCM1 0.786 GCM1
HDX 0.785 HDX
UAGUGUU 0.783
HOXC11 0.782 HOXC11
GSC_GSC2 0.778 GSC
GSC2
ZBTB3 0.777 ZBTB3
ETV1_ERF_FEV_ELF1 0.777 ETV1
ERF
FEV
ELF1
NR4A1 0.776 NR4A1
MEF2D_MEF2A 0.774 MEF2D
MEF2A
RXRA_NR2F6_NR2C2 0.768 RXRA
NR2F6
NR2C2
GLIS2 0.755 GLIS2
SIX1_SIX3_SIX2 0.751 SIX1
SIX3
SIX2
SMAD3 0.740 SMAD3
STAT4 0.737 STAT4
HNF4G 0.730 HNF4G
UGGCACU 0.727
ETS1 0.726 ETS1
HOXC6_HOXA7 0.725 HOXC6
HOXA7
HNF1A_HNF1B 0.723 HNF1A
HNF1B
AGGUAGU 0.721 hsa-miR-196a-5p
hsa-miR-196b-5p
FLI1 0.714 FLI1
ZNF384 0.713 ZNF384
MLXIPL 0.711 MLXIPL
UBP1 0.710 UBP1
EBF1 0.708 EBF1
PROX1 0.705 PROX1
PAX3 0.703 PAX3
ACCCUGU 0.700 hsa-miR-10a-5p
hsa-miR-10b-5p
SIX6 0.699 SIX6
RELA 0.699 RELA
MYF6 0.698 MYF6
GUCAGUU 0.697 hsa-miR-223-3p
RREB1 0.696 RREB1
SOX21 0.693 SOX21
ZNF148 0.692 ZNF148
GFI1 0.690 GFI1
HMBOX1 0.690 HMBOX1
NR1I2 0.687 NR1I2
FOXD3_FOXI1_FOXF1 0.686 FOXD3
FOXI1
FOXF1
CAGUGCA 0.678 hsa-miR-148a-3p
hsa-miR-148b-3p
hsa-miR-152-3p
PATZ1_KLF4 0.672 PATZ1
KLF4
PPARA 0.672 PPARA
TCF7L1 0.671 TCF7L1
AUAAAGU 0.667 hsa-miR-142-5p
hsa-miR-5590-3p
SOX4 0.659 SOX4
NKX2-8 0.656 NKX2-8
DMC1 0.652 DMC1
SPDEF 0.649 SPDEF
SMAD2 0.645 SMAD2
SREBF2 0.644 SREBF2
ATF7 0.641 ATF7
RHOXF1 0.641 RHOXF1
IRF2_STAT2_IRF8_IRF1 0.640 IRF2
STAT2
IRF8
IRF1
BARX1 0.638 BARX1
SOX13_SOX12 0.635 SOX13
SOX12
ETV3 0.633 ETV3
POU2F2_POU3F1 0.632 POU2F2
POU3F1
LMX1B_MNX1_RAX2 0.632 LMX1B
MNX1
RAX2
SOX5 0.631 SOX5
GAGGUAG 0.630 hsa-let-7a-5p
hsa-let-7b-5p
hsa-let-7c-5p
hsa-let-7d-5p
hsa-let-7e-5p
hsa-let-7f-5p
hsa-let-7g-5p
hsa-let-7i-5p
hsa-miR-98-5p
hsa-miR-4458
hsa-miR-4500
HOXB13 0.629 HOXB13
ONECUT1 0.628 ONECUT1
AGUGCUU 0.625 hsa-miR-302c-3p.2
hsa-miR-520f-3p
MSX2 0.625 MSX2
GCM2 0.617 GCM2
DLX5 0.617 DLX5
CEBPB 0.616 CEBPB
HOXA10_HOXB9 0.610 HOXA10
HOXB9
MEIS3_TGIF2LX 0.607 MEIS3
TGIF2LX
HLF_TEF 0.605 HLF
TEF
LHX2 0.604 LHX2
NKX2-2 0.604 NKX2-2
HOMEZ 0.604 HOMEZ
REST 0.604 REST
SP100 0.601 SP100
NR2C1 0.600 NR2C1
PPARG 0.599 PPARG
NKX2-4 0.594 NKX2-4
TCF21 0.591 TCF21
DMBX1 0.590 DMBX1
GGCUCAG 0.588 hsa-miR-24-3p
SP1 0.587 SP1
SMAD4 0.583 SMAD4
MESP1 0.582 MESP1
HOXA13 0.577 HOXA13
KLF7 0.575 KLF7
CDX1 0.570 CDX1
BHLHE40 0.568 BHLHE40
UGCAUAG 0.567 hsa-miR-153-3p
HSFY2 0.564 HSFY2
HSF2 0.553 HSF2
UACAGUA 0.549 hsa-miR-101-3p.2
AAGGUGC 0.548 hsa-miR-18a-5p
hsa-miR-18b-5p
hsa-miR-4735-3p
ARID5A 0.540 ARID5A
UAAGACU 0.532 hsa-miR-499a-5p
NR4A2 0.524 NR4A2
GFI1B 0.524 GFI1B
BACH1_NFE2_NFE2L2 0.522 BACH1
NFE2
NFE2L2
VENTX 0.518 VENTX
GMEB1 0.512 GMEB1
SCRT1_SCRT2 0.512 SCRT1
SCRT2
FIGLA 0.500 FIGLA
ZSCAN4 0.494 ZSCAN4
E2F7_E2F1 0.488 E2F7
E2F1
MAF_NRL 0.484 MAF
NRL
IRX2 0.483 IRX2
AAGUGCU 0.482 hsa-miR-302a-3p
hsa-miR-302b-3p
hsa-miR-302c-3p.1
hsa-miR-302d-3p
hsa-miR-302e
hsa-miR-372-3p
hsa-miR-373-3p
hsa-miR-520a-3p
hsa-miR-520b
hsa-miR-520c-3p
hsa-miR-520d-3p
hsa-miR-520e
ZNF333 0.481 ZNF333
E2F8 0.480 E2F8
EMX1 0.479 EMX1
NR1D1 0.478 NR1D1
HOXD4 0.477 HOXD4
ZBTB14 0.469 ZBTB14
PKNOX2 0.468 PKNOX2
NFIX_NFIB 0.462 NFIX
NFIB
STAT5A 0.460 STAT5A
HBP1 0.456 HBP1
AUGGCUU 0.455 hsa-miR-135a-5p
hsa-miR-135b-5p
EN1_ESX1_GBX1 0.452 EN1
ESX1
GBX1
RARA 0.445 RARA
FOXN1 0.444 FOXN1
WT1_MTF1_ZBTB7B 0.444 WT1
MTF1
ZBTB7B
POU1F1 0.442 POU1F1
NR4A3 0.440 NR4A3
CLOCK 0.436 CLOCK
FOXJ2 0.434 FOXJ2
CREB1 0.432 CREB1
TAL1 0.432 TAL1
POU2F1 0.432 POU2F1
ALX1_ARX 0.431 ALX1
ARX
NKX2-5 0.429 NKX2-5
ZIC2_GLI1 0.427 ZIC2
GLI1
NOTO_VSX2_DLX2_DLX6_NKX6-1 0.427 NOTO
VSX2
DLX2
DLX6
NKX6-1
POU3F3_POU3F4 0.421 POU3F3
POU3F4
ATF5 0.419 ATF5
MAX_TFEB 0.418 MAX
TFEB
KLF14_SP8 0.418 KLF14
SP8
ZNF652 0.416 ZNF652
EZH2 0.415 EZH2
ZNF784 0.414 ZNF784
CBFB 0.412 CBFB
ZIC3_ZIC4 0.411 ZIC3
ZIC4
TEAD4 0.409 TEAD4
HOXD9 0.408 HOXD9
TCF7L2 0.406 TCF7L2
EOMES 0.406 EOMES
GATA3 0.406 GATA3
HOXB2_UNCX_HOXD3 0.404 HOXB2
UNCX
HOXD3
OTX1 0.403 OTX1
NKX2-1 0.395 NKX2-1
UGAAAUG 0.394
KLF8 0.393 KLF8
RAD21_SMC3 0.390 RAD21
SMC3
PAX1_PAX9 0.390 PAX1
PAX9
HOXD11_HOXA11 0.389 HOXD11
HOXA11
HMX2 0.381 HMX2
IRX6_IRX4 0.379 IRX6
IRX4
TEAD3_TEAD1 0.378 TEAD3
TEAD1
POU4F1_POU4F3 0.378 POU4F1
POU4F3
PPARD 0.378 PPARD
FOXF2_FOXJ1 0.374 FOXF2
FOXJ1
RBPJ 0.372 RBPJ
ATF4 0.369 ATF4
SOX11 0.367 SOX11
UAAGACG 0.365 hsa-miR-208a-3p
hsa-miR-208b-3p
ZFHX3 0.365 ZFHX3
KLF16_SP2 0.364 KLF16
SP2
HMGA2 0.363 HMGA2
TBX2 0.355 TBX2
STAT6 0.352 STAT6
EGR3_EGR2 0.349 EGR3
EGR2
RORC 0.345 RORC
SOX14 0.341 SOX14
HNF4A 0.340 HNF4A
BPTF 0.336 BPTF
TP73 0.335 TP73
DLX1_HOXA3_BARX2 0.335 DLX1
HOXA3
BARX2
BRCA1 0.332 BRCA1
PITX1 0.330 PITX1
GGCAAGA 0.330 hsa-miR-31-5p
KLF13 0.329 KLF13
HOXA2_HOXB1 0.324 HOXA2
HOXB1
SOX7 0.324 SOX7
SOX7
NR6A1 0.322 NR6A1
RUNX1_RUNX2 0.321 RUNX1
RUNX2
HOXA9 0.321 HOXA9
DRGX_PROP1 0.320 DRGX
PROP1
HMX3 0.320 HMX3
MYOD1 0.320 MYOD1
GATA6 0.317 GATA6
PRDM4 0.316 PRDM4
SOX1 0.315 SOX1
ETV7 0.315 ETV7
DDIT3 0.315 DDIT3
ZKSCAN3 0.314 ZKSCAN3
JUN 0.301 JUN
PLAG1 0.300 PLAG1
VDR 0.300 VDR
IRX5 0.300 IRX5
ZNF232 0.298 ZNF232
DLX4_HOXD8 0.297 DLX4
HOXD8
ZNF282 0.297 ZNF282
AGUGGUU 0.295 hsa-miR-140-5p
TCF7 0.295 TCF7
RCOR1_MTA3 0.295 RCOR1
MTA3
ZKSCAN1 0.291 ZKSCAN1
HOXA1 0.286 HOXA1
UAUUGCU 0.284 hsa-miR-137
ACAGUAU 0.284 hsa-miR-144-3p
MNT_HEY1_HEY2 0.281 MNT
HEY1
HEY2
SOX6 0.281 SOX6
HESX1 0.279 HESX1
SOX18 0.279 SOX18
NR3C1 0.278 NR3C1
CCAGUGU 0.278 hsa-miR-199a-5p
hsa-miR-199b-5p
TBX15_MGA 0.276 TBX15
MGA
OTX2_CRX 0.274 OTX2
CRX
CREB3L1_CREB3 0.273 CREB3L1
CREB3
KLF3 0.269 KLF3
PITX2 0.266 PITX2
PLAGL1 0.265 PLAGL1
CENPB 0.263 CENPB
CAGUAGU 0.262 hsa-miR-199a-3p
hsa-miR-199b-3p
hsa-miR-3129-5p
ZBTB49 0.260 ZBTB49
AGCCCUU 0.259 hsa-miR-129-1-3p
hsa-miR-129-2-3p
AGCUGCC 0.258 hsa-miR-22-3p
HIF1A 0.252 HIF1A
CAGUCCA 0.252 hsa-miR-455-3p.1
GATA5 0.251 GATA5
VAX2_RHOXF2 0.250 VAX2
RHOXF2
EN2_GBX2_LBX2 0.250 EN2
GBX2
LBX2
HOXC13 0.247 HOXC13
ZNF423 0.246 ZNF423
HMX1 0.238 HMX1
ZNF350 0.238 ZNF350
NFIA 0.237 NFIA
CCUUCAU 0.237 hsa-miR-205-5p
RORA 0.232 RORA
GUGCAAA 0.231 hsa-miR-19a-3p
hsa-miR-19b-3p
HAND1 0.229 HAND1
GGACGGA 0.226 hsa-miR-184
ARNT 0.222 ARNT
HSF4 0.221 HSF4
UGACAUC 0.220 hsa-miR-489-3p
ARID5B 0.219 ARID5B
CUACAGU 0.216 hsa-miR-139-5p
ISL2 0.214 ISL2
TFCP2L1 0.213 TFCP2L1
RFX5 0.210 RFX5
E2F4 0.207 E2F4
CUUUGGU 0.206 hsa-miR-9-5p
BCL6B 0.200 BCL6B
AACGGAA 0.198 hsa-miR-191-5p
PITX3 0.197 PITX3
ATF2_ATF1_ATF3 0.197 ATF2
ATF1
ATF3
SREBF1_TFE3 0.197 SREBF1
TFE3
ZNF8 0.197 ZNF8
ZNF8
LHX3 0.196 LHX3
GTF2I 0.193 GTF2I
GGAGUGU 0.189 hsa-miR-122-5p
ZBTB4 0.188 ZBTB4
ZNF263 0.188 ZNF263
AACCUGG 0.186 hsa-miR-490-3p
ONECUT2_ONECUT3 0.184 ONECUT2
ONECUT3
HIC1 0.182 HIC1
JUND 0.182 JUND
OVOL1 0.181 OVOL1
ACUGCAU 0.180 hsa-miR-217
hsa-miR-6807-3p
POU5F1_POU2F3 0.178 POU5F1
POU2F3
NKX6-3 0.177 NKX6-3
HMGA1 0.176 HMGA1
AGCUUAU 0.176 hsa-miR-21-5p
hsa-miR-590-5p
PTF1A 0.175 PTF1A
EGR1_EGR4 0.174 EGR1
EGR4
HES7_HES5 0.174 HES7
HES5
FOXA3_FOXC2 0.170 FOXA3
FOXC2
NKX1-1 0.168 NKX1-1
TFAP2E 0.167 TFAP2E
AUGGCAC 0.166 hsa-miR-183-5p.1
NFAT5 0.164 NFAT5
TFCP2 0.164 TFCP2
ZFX 0.162 ZFX
PDX1 0.162 PDX1
GGCAGUG 0.160 hsa-miR-34a-5p
hsa-miR-34c-5p
hsa-miR-449a
hsa-miR-449b-5p
GLIS1 0.159 GLIS1
NKX2-3 0.159 NKX2-3
BACH2 0.158 BACH2
KLF15 0.157 KLF15
GCUGGUG 0.157 hsa-miR-138-5p
PKNOX1_TGIF2 0.156 PKNOX1
TGIF2
NFIL3 0.156 NFIL3
LHX6 0.155 LHX6
POU6F1 0.154 POU6F1
RELB 0.154 RELB
CTCF_CTCFL 0.153 CTCF
CTCFL
AUGUGCC 0.151 hsa-miR-455-5p
AUGACAC 0.151 hsa-miR-425-5p
ESR1 0.151 ESR1
NFKB2 0.147 NFKB2
ISX 0.146 ISX
AR_NR3C2 0.146 AR
NR3C2
NFKB1 0.144 NFKB1
VAX1_GSX2 0.142 VAX1
GSX2
CEBPG 0.140 CEBPG
TBX4 0.139 TBX4
TLX1_NFIC 0.139 TLX1
NFIC
UCCCUUU 0.137 hsa-miR-204-5p
hsa-miR-211-5p
E2F2_E2F5 0.136 E2F2
E2F5
TBX3 0.135 TBX3
PAX8 0.134 PAX8
CCUUGGC 0.133 hsa-miR-212-5p
UUGUUCG 0.132 hsa-miR-375
CCAGCAU 0.131 hsa-miR-338-3p
CCACAGG 0.129 hsa-miR-140-3p.1
UAAUGCU 0.128 hsa-miR-155-5p
ZBED1 0.128 ZBED1
ZBED1
ACCCGUA 0.127 hsa-miR-99a-5p
hsa-miR-99b-5p
hsa-miR-100-5p
GLIS3 0.126 GLIS3
NR2F1 0.125 NR2F1
SRY 0.122 SRY
PAX5 0.121 PAX5
SOX9 0.120 SOX9
ACAGUAC 0.115 hsa-miR-101-3p.1
BATF3 0.115 BATF3
KLF6 0.111 KLF6
NR2F2 0.110 NR2F2
NKX6-2 0.110 NKX6-2
GCCUGUC 0.108 hsa-miR-214-5p
ZNF274 0.107 ZNF274
GMEB2 0.106 GMEB2
POU4F2 0.102 POU4F2
UGCAUUG 0.102 hsa-miR-33a-5p
hsa-miR-33b-5p
GAUAUGU 0.102 hsa-miR-190a-5p
hsa-miR-190b
PAX4 0.101 PAX4
GAGAUGA 0.100 hsa-miR-143-3p
hsa-miR-4770
hsa-miR-6088
GUAACAG 0.097 hsa-miR-194-5p
ZBTB7A_ZBTB7C 0.097 ZBTB7A
ZBTB7C
ACCACAG 0.093 hsa-miR-140-3p.2
HOXB5 0.093 HOXB5
ACAUUCA 0.093 hsa-miR-181a-5p
hsa-miR-181b-5p
hsa-miR-181c-5p
hsa-miR-181d-5p
hsa-miR-4262
UGCAGUC 0.093 hsa-miR-455-3p.2
UGACCUA 0.092 hsa-miR-192-5p
hsa-miR-215-5p
GAGAACU 0.091 hsa-miR-146a-5p
hsa-miR-146b-5p
hsa-miR-7153-5p
ZNF410 0.091 ZNF410
HOXC10_HOXD13 0.091 HOXC10
HOXD13
PBX2 0.088 PBX2
FOXD1_FOXO1_FOXO6_FOXG1_FOXP1 0.088 FOXD1
FOXO1
FOXO6
FOXG1
FOXP1
FOXC1 0.085 FOXC1
DBX2_HLX 0.084 DBX2
HLX
ZNF524 0.082 ZNF524
ACUGGCC 0.081 hsa-miR-193a-3p
hsa-miR-193b-3p
ZNF35 0.080 ZNF35
AAUCUCA 0.078 hsa-miR-216a-5p
ETV4_ETS2 0.077 ETV4
ETS2
BBX 0.076 BBX
UCACAGU 0.073 hsa-miR-27a-3p
hsa-miR-27b-3p
THRB 0.072 THRB
VSX1 0.071 VSX1
GUAAACA 0.069 hsa-miR-30a-5p
hsa-miR-30b-5p
hsa-miR-30c-5p
hsa-miR-30d-5p
hsa-miR-30e-5p
T 0.068 T
CACAGUG 0.068 hsa-miR-128-3p
hsa-miR-216a-3p
hsa-miR-3681-3p
CREB5_CREM_JUNB 0.063 CREB5
CREM
JUNB
FOXM1_TBL1XR1 0.060 FOXM1
TBL1XR1
TFDP1 0.060 TFDP1
CGUGUCU 0.059 hsa-miR-187-3p
HOXA6 0.058 HOXA6
AAUGCCC 0.058 hsa-miR-365a-3p
hsa-miR-365b-3p
MEF2C 0.058 MEF2C
KLF12 0.054 KLF12
CGUACCG 0.053 hsa-miR-126-3p.1
HINFP1 0.051
DLX3_EVX1_MEOX1 0.050 DLX3
EVX1
MEOX1
SOX30 0.050 SOX30
UUGGCAA 0.050 hsa-miR-182-5p
UGUGCGU 0.050 hsa-miR-210-3p
ISL1 0.047 ISL1
CPEB1 0.046 CPEB1
UUGGCAC 0.046 hsa-miR-96-5p
hsa-miR-1271-5p
SOX3_SOX2 0.046 SOX3
SOX2
NKX3-1 0.045 NKX3-1
AAUCUCU 0.041 hsa-miR-216b-5p
CACCUCC 0.037 hsa-miR-1306-5p
CUGGCUG 0.036 hsa-miR-3064-5p
hsa-miR-6504-5p
POU6F2 0.033 POU6F2
UGUGCUU 0.030 hsa-miR-218-5p
UUUUUGC 0.025 hsa-miR-129-5p
SIX4 0.019 SIX4
AACCGUU 0.017 hsa-miR-451a
GUACCGU 0.013 hsa-miR-126-3p.2
AGAUCAG 0.011 hsa-miR-383-5p.2
GAUCAGA 0.007 hsa-miR-383-5p.1

All samples sorted alphabetically


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Sample name Condition Replicate/Batch
Epithelial
Mesenchymal