ISMARA results: bHLH

Motif ID: bHLH_family.p2

Gene Symbol	Entrez ID	Gene Name
ARNTL	406	aryl hydrocarbon receptor nuclear translocator-like
ARNTL2	56938	aryl hydrocarbon receptor nuclear translocator-like 2
CLOCK	9575	clock homolog (mouse)
HES6	55502	hairy and enhancer of split 6 (Drosophila)
HEY1	23462	hairy/enhancer-of-split related with YRPW motif 1
HEY2	23493	hairy/enhancer-of-split related with YRPW motif 2
HEYL	26508	hairy/enhancer-of-split related with YRPW motif-like
ID1	3397	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein
MITF	4286	microphthalmia-associated transcription factor
MLXIPL	51085	MLX interacting protein-like
MNT	4335	MAX binding protein
MXD3	83463	MAX dimerization protein 3
MXD4	10608	MAX dimerization protein 4
MXI1	4601	MAX interactor 1
NPAS2	4862	neuronal PAS domain protein 2
OLIG1	116448	oligodendrocyte transcription factor 1
OLIG2	10215	oligodendrocyte lineage transcription factor 2
TFE3	7030	transcription factor binding to IGHM enhancer 3

Gene	Promoter	Pearson	P-value	Plot
MXI1	chr10_+_111957292	0.57	2.1e-02	Click!
MLXIPL	chr7_-_72676750	0.55	2.9e-02	Click!
OLIG1	chr21_+_33365874	-0.42	1.0e-01	Click!
ARNTL2	chr12_-_27490824	-0.40	1.2e-01	Click!
OLIG2	chr21_+_33320080	-0.34	1.9e-01	Click!
HEYL	chr1_-_39877928	-0.33	2.2e-01	Click!
MXD4	chr4_-_2233504	-0.32	2.3e-01	Click!
MITF	chr3_+_69895310	-0.28	2.9e-01	Click!
HEY1	chr8_-_80842452	-0.28	2.9e-01	Click!
CLOCK	chr4_-_56107725	-0.25	3.4e-01	Click!
ARNTL	chr11_+_13255836	-0.20	4.5e-01	Click!
NPAS2	chr2_+_100802923	0.19	4.9e-01	Click!
HES6	chr2_-_238813284	0.14	6.0e-01	Click!
TFE3	chrX_-_48787696	-0.12	6.6e-01	Click!
HEY2	chr6_+_126112506	0.08	7.7e-01	Click!
MNT	chr17_-_2250967	-0.08	7.7e-01	Click!
MXD3	chr5_-_176671437	-0.05	8.5e-01	Click!
ID1	chr20_+_29656744	-0.00	9.9e-01	Click!

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Showing 1 to 20 of 200 entries

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr8_+_120289735	5.532	NM_052886	MAL2	mal, T-cell differentiation protein 2 (gene/pseudogene)
chr16_-_66827449	4.608	NM_024939	ESRP2	epithelial splicing regulatory protein 2
chr22_+_38720881	4.540	NM_138435	FAM83F	family with sequence similarity 83, member F
chr8_+_95722448	3.392		ESRP1	epithelial splicing regulatory protein 1
chr8_-_17702991	3.117
chr16_+_67236699	3.115		CDH3	cadherin 3, type 1, P-cadherin (placental)
chr17_-_73636362	3.106		TMC6	transmembrane channel-like 6
chr12_-_56432292	2.989		CDK4	cyclin-dependent kinase 4
chr17_+_9489578	2.942	NM_153210	USP43	ubiquitin specific peptidase 43
chr16_-_23068010	2.815	NM_020718	USP31	ubiquitin specific peptidase 31
chr8_+_95722575	2.734		ESRP1	epithelial splicing regulatory protein 1
chr2_-_172675873	2.694		DLX2	distal-less homeobox 2
chr8_+_95722516	2.690	NM_001034915 NM_001122825 NM_001122826 NM_001122827 NM_017697	ESRP1	epithelial splicing regulatory protein 1
chr12_-_56432377	2.643		CDK4	cyclin-dependent kinase 4
chr12_-_56432375	2.604		CDK4	cyclin-dependent kinase 4
chr12_-_56432385	2.600	NM_000075	CDK4	cyclin-dependent kinase 4
chr11_+_384199	2.564	NM_007183	PKP3	plakophilin 3
chr5_+_78567604	2.551	NM_152405	JMY	junction mediating and regulatory protein, p53 cofactor
chr11_+_384238	2.360		PKP3	plakophilin 3
chr11_+_45900731	2.301		GYLTL1B	glycosyltransferase-like 1B

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Showing 1 to 19 of 19 entries

enrichment	p-value	GO term	description
1.93	4.26e-02	GO:0042254	ribosome biogenesis
1.80	1.19e-02	GO:0034470	ncRNA processing
1.68	9.50e-03	GO:0034660	ncRNA metabolic process
1.29	1.00e-04	GO:0010467	gene expression
1.26	4.15e-03	GO:0016070	RNA metabolic process
1.24	2.93e-04	GO:0044249	cellular biosynthetic process
1.24	1.31e-02	GO:0044281	small molecule metabolic process
1.23	4.63e-04	GO:0009058	biosynthetic process
1.22	1.38e-02	GO:0090304	nucleic acid metabolic process
1.19	9.94e-04	GO:0034641	cellular nitrogen compound metabolic process
1.19	1.48e-03	GO:0006807	nitrogen compound metabolic process
1.19	3.54e-02	GO:0044267	cellular protein metabolic process
1.18	8.77e-10	GO:0044237	cellular metabolic process
1.18	1.57e-05	GO:0044260	cellular macromolecule metabolic process
1.18	2.73e-02	GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
1.17	5.25e-09	GO:0044238	primary metabolic process
1.16	1.64e-10	GO:0008152	metabolic process
1.16	1.20e-04	GO:0043170	macromolecule metabolic process
1.09	3.16e-08	GO:0009987	cellular process

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Showing 1 to 20 of 21 entries

enrichment	p-value	GO term	description
2.99	4.85e-02	GO:0044452	nucleolar part
1.48	1.55e-03	GO:0005730	nucleolus
1.41	2.16e-02	GO:0030529	ribonucleoprotein complex
1.26	3.27e-06	GO:0031974	membrane-enclosed lumen
1.26	5.02e-06	GO:0043233	organelle lumen
1.26	9.56e-06	GO:0070013	intracellular organelle lumen
1.26	1.76e-04	GO:0031981	nuclear lumen
1.26	6.81e-03	GO:0005654	nucleoplasm
1.25	1.48e-02	GO:0005739	mitochondrion
1.24	1.45e-04	GO:0044428	nuclear part
1.20	1.60e-02	GO:0005829	cytosol
1.15	1.60e-06	GO:0044422	organelle part
1.15	2.31e-06	GO:0044446	intracellular organelle part
1.14	2.40e-06	GO:0044444	cytoplasmic part
1.13	1.02e-10	GO:0005737	cytoplasm
1.10	4.43e-06	GO:0043227	membrane-bounded organelle
1.10	6.21e-06	GO:0043231	intracellular membrane-bounded organelle
1.09	2.26e-11	GO:0005622	intracellular
1.09	4.61e-10	GO:0044424	intracellular part
1.09	1.02e-06	GO:0043226	organelle

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Showing 1 to 4 of 4 entries

enrichment	p-value	GO term	description
1.39	7.76e-03	GO:0043565	sequence-specific DNA binding
1.24	2.90e-03	GO:0016740	transferase activity
1.11	3.97e-05	GO:0005515	protein binding
1.11	4.04e-02	GO:0003824	catalytic activity