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GSE67402: E.coli regulatory changes under long-term starvation

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Mean activities

Top 10 and bottom 10 mean activities.

Mean activities sorted by motif Z-value.

Motif nameMean activityZ-ValueAssociated genesLogo
AccB 1.492 0.438 SeqLogo of AccB
AcrR -0.894 -0.353 SeqLogo of AcrR
Ada -1.394 -0.596 SeqLogo of Ada
AdiY -2.952 -1.361 SeqLogo of AdiY
AgaR -1.894 -0.985 SeqLogo of AgaR
AidB -2.415 -0.602 SeqLogo of AidB
AlaS 0.668 0.203 SeqLogo of AlaS
AllR -2.682 -1.394 SeqLogo of AllR
AllS -2.331 -0.710 SeqLogo of AllS
AlsR -0.737 -0.494 SeqLogo of AlsR
AppY -1.588 -0.535 SeqLogo of AppY
AraC -1.853 -1.416 SeqLogo of AraC
ArcA 0.487 1.081 SeqLogo of ArcA
ArgP -0.866 -0.747 SeqLogo of ArgP
ArgR -0.125 -0.141 SeqLogo of ArgR
ArsR -2.299 -0.700 SeqLogo of ArsR
AscG -0.878 -0.489 SeqLogo of AscG
AsnC 0.238 0.127 SeqLogo of AsnC
AtoC -1.331 -0.396 SeqLogo of AtoC
BaeR -0.800 -0.391 SeqLogo of BaeR
BasR -1.325 -0.932 SeqLogo of BasR
BetI -1.492 -0.615 SeqLogo of BetI
BirA -1.970 -0.840 SeqLogo of BirA
BluR -1.638 -0.498 SeqLogo of BluR
BolA -2.388 -1.019 SeqLogo of BolA
CRP -0.157 -0.583 SeqLogo of CRP
CadC -2.571 -0.924 SeqLogo of CadC
CaiF -1.864 -0.782 SeqLogo of CaiF
Cbl -0.089 -0.035 SeqLogo of Cbl
CdaR 0.314 0.187 SeqLogo of CdaR
CecR -0.247 -0.075 SeqLogo of CecR
ChbR -1.060 -0.315 SeqLogo of ChbR
ComR -0.453 -0.137 SeqLogo of ComR
CpxR 0.042 0.069 SeqLogo of CpxR
Cra 0.184 0.394 SeqLogo of Cra
CreB -2.446 -1.230 SeqLogo of CreB
CsgD -0.413 -0.385 SeqLogo of CsgD
CsiR -1.749 -0.522 SeqLogo of CsiR
CspA -0.203 -0.083 SeqLogo of CspA
CueR -0.460 -0.234 SeqLogo of CueR
CusR -0.076 -0.006 SeqLogo of CusR
CynR -3.083 -1.604 SeqLogo of CynR
CysB -0.635 -0.677 SeqLogo of CysB
CytR 0.075 0.093 SeqLogo of CytR
Dan -3.038 -1.295 SeqLogo of Dan
DcuR 0.338 0.188 SeqLogo of DcuR
DeoR -1.079 -0.715 SeqLogo of DeoR
DhaR -0.714 -0.303 SeqLogo of DhaR
DicA -3.218 -1.373 SeqLogo of DicA
DinJ-YafQ 0.957 0.406 SeqLogo of DinJ-YafQ
DnaA -0.058 -0.055 SeqLogo of DnaA
DpiA -0.580 -0.598 SeqLogo of DpiA
DsdC -2.767 -1.430 SeqLogo of DsdC
EbgR -3.186 -0.968 SeqLogo of EbgR
EnvR 1.528 0.317 SeqLogo of EnvR
EnvY 2.418 0.788 SeqLogo of EnvY
EvgA -2.036 -1.928 SeqLogo of EvgA
ExuR -0.869 -0.507 SeqLogo of ExuR
FNR -0.345 -0.857 SeqLogo of FNR
FabR 0.369 0.146 SeqLogo of FabR
FadR 0.132 0.137 SeqLogo of FadR
FeaR -3.020 -1.277 SeqLogo of FeaR
FhlA -0.503 -0.298 SeqLogo of FhlA
Fis 2.881 8.386 SeqLogo of Fis
FlhDC 0.369 0.454 SeqLogo of FlhDC
FliZ -1.003 -0.759 SeqLogo of FliZ
FucR -1.455 -0.618 SeqLogo of FucR
Fur -0.387 -0.833 SeqLogo of Fur
GadE -0.107 -0.095 SeqLogo of GadE
GadE-RcsB -1.993 -1.244 SeqLogo of GadE-RcsB
GadW 1.650 0.858 SeqLogo of GadW
GadX -0.475 -0.419 SeqLogo of GadX
GalR -0.256 -0.020 SeqLogo of GalR
GalS -0.256 -0.020 SeqLogo of GalS
GatR -3.574 -1.077 SeqLogo of GatR
GcvA -0.769 -0.396 SeqLogo of GcvA
GlcC -3.043 -1.240 SeqLogo of GlcC
GlpR -1.376 -0.805 SeqLogo of GlpR
GlrR 5.579 1.659 SeqLogo of GlrR
GntR -0.451 -0.427 SeqLogo of GntR
GutM -0.719 -0.217 SeqLogo of GutM
H-NS -0.067 -0.164 SeqLogo of H-NS
HU -0.143 -0.102 SeqLogo of HU
HcaR -1.580 -0.673 SeqLogo of HcaR
HdfR 7.495 2.025 SeqLogo of HdfR
HipAB -0.253 -0.062 SeqLogo of HipAB
HipB -0.842 -0.250 SeqLogo of HipB
HyfR 0.460 0.126 SeqLogo of HyfR
HypT 0.107 0.057 SeqLogo of HypT
IHF -0.581 -1.399 SeqLogo of IHF
IclR -0.545 -0.226 SeqLogo of IclR
IdnR -2.203 -1.130 SeqLogo of IdnR
IlvY -0.512 -0.218 SeqLogo of IlvY
IscR 0.770 0.609 SeqLogo of IscR
KdgR -0.132 -0.054 SeqLogo of KdgR
KdpE -3.065 -0.933 SeqLogo of KdpE
LacI -2.700 -0.795 SeqLogo of LacI
LeuO -0.727 -0.602 SeqLogo of LeuO
LexA -0.720 -1.300 SeqLogo of LexA
LldR -0.644 -0.194 SeqLogo of LldR
LrhA 0.137 0.061 SeqLogo of LrhA
Lrp 1.114 2.308 SeqLogo of Lrp
LsrR -2.486 -1.054 SeqLogo of LsrR
LysR -1.953 -0.811 SeqLogo of LysR
MalI -1.478 -0.628 SeqLogo of MalI
MalT 0.869 0.560 SeqLogo of MalT
MarA 0.090 0.077 SeqLogo of MarA
MarR -3.262 -0.758 SeqLogo of MarR
MatA -1.403 -0.809 SeqLogo of MatA
MazE -1.474 -0.114 SeqLogo of MazE
MazE-MazF -1.474 -0.114 SeqLogo of MazE-MazF
McbR -2.460 -1.266 SeqLogo of McbR
MelR -1.641 -0.697 SeqLogo of MelR
MetJ -0.348 -0.303 SeqLogo of MetJ
MetR 0.089 0.064 SeqLogo of MetR
MhpR -2.165 -0.658 SeqLogo of MhpR
Mlc -1.089 -0.899 SeqLogo of Mlc
MlrA 0.880 0.504 SeqLogo of MlrA
MngR -2.897 -1.234 SeqLogo of MngR
MntR 0.122 0.071 SeqLogo of MntR
ModE 0.507 0.438 SeqLogo of ModE
MprA 0.028 0.012 SeqLogo of MprA
MqsA 0.996 0.526 SeqLogo of MqsA
MraZ 0.040 0.016 SeqLogo of MraZ
MtlR -1.478 -0.444 SeqLogo of MtlR
MurR -1.412 -0.939 SeqLogo of MurR
Nac -1.149 -0.999 SeqLogo of Nac
NadR -1.195 -0.622 SeqLogo of NadR
NagC 0.371 0.505 SeqLogo of NagC
NanR -2.774 -1.927 SeqLogo of NanR
NarL -1.074 -1.481 SeqLogo of NarL
NarP -1.295 -1.067 SeqLogo of NarP
NemR -0.105 -0.039 SeqLogo of NemR
NhaR -1.316 -0.645 SeqLogo of NhaR
NikR -0.237 -0.069 SeqLogo of NikR
NimR -2.995 -1.275 SeqLogo of NimR
NorR -0.416 -0.171 SeqLogo of NorR
NrdR -1.891 -0.928 SeqLogo of NrdR
NsrR -0.274 -0.445 SeqLogo of NsrR
NtrC 0.001 0.001 SeqLogo of NtrC
OmpR -0.616 -0.531 SeqLogo of OmpR
OxyR -0.143 -0.196 SeqLogo of OxyR
PaaX -2.922 -1.223 SeqLogo of PaaX
PdhR 2.095 1.534 SeqLogo of PdhR
PepA -0.380 -0.151 SeqLogo of PepA
PgrR -1.385 -0.912 SeqLogo of PgrR
PhoB -1.133 -1.841 SeqLogo of PhoB
PhoP -0.336 -0.626 SeqLogo of PhoP
PrpR -1.364 -0.536 SeqLogo of PrpR
PspF 0.315 0.159 SeqLogo of PspF
PurR -0.764 -1.018 SeqLogo of PurR
PutA -0.404 -0.161 SeqLogo of PutA
PuuR 1.027 0.429 SeqLogo of PuuR
QseB 0.816 0.252 SeqLogo of QseB
RbsR 1.330 0.685 SeqLogo of RbsR
RcdA -1.282 -0.727 SeqLogo of RcdA
RclR -2.917 -0.884 SeqLogo of RclR
RcsAB -2.439 -1.331 SeqLogo of RcsAB
RcsB -0.912 -0.830 SeqLogo of RcsB
RcsB-BglJ -2.910 -2.992 SeqLogo of RcsB-BglJ
RelB 3.263 0.993 SeqLogo of RelB
RhaR 0.491 0.123 SeqLogo of RhaR
RhaS -3.076 -1.312 SeqLogo of RhaS
Rob -0.029 -0.023 SeqLogo of Rob
RstA 2.888 1.501 SeqLogo of RstA
RtcR -1.110 -0.330 SeqLogo of RtcR
RutR -1.596 -1.121 SeqLogo of RutR
SdiA -1.486 -0.854 SeqLogo of SdiA
SgrR 0.134 0.069 SeqLogo of SgrR
Sigma19 0.238 0.059 SeqLogo of Sigma19
Sigma24 -0.154 -0.371 SeqLogo of Sigma24
Sigma28 -1.633 -2.726 SeqLogo of Sigma28
Sigma32 0.068 0.182 SeqLogo of Sigma32
Sigma38 -0.544 -1.785 SeqLogo of Sigma38
Sigma54 -0.617 -0.897 SeqLogo of Sigma54
Sigma70 0.260 1.568 SeqLogo of Sigma70
SlyA -5.639 -1.684 SeqLogo of SlyA
SoxR 0.253 0.096 SeqLogo of SoxR
SoxS -0.121 -0.121 SeqLogo of SoxS
StpA 1.041 0.866 SeqLogo of StpA
SutR -1.497 -0.638 SeqLogo of SutR
TdcA 0.051 0.015 SeqLogo of TdcA
TorR -2.306 -1.563 SeqLogo of TorR
TreR -3.341 -1.007 SeqLogo of TreR
TrpR -0.351 -0.248 SeqLogo of TrpR
TyrR 0.075 0.072 SeqLogo of TyrR
UhpA -7.409 -1.941 SeqLogo of UhpA
UidR -0.840 -0.333 SeqLogo of UidR
UlaR -1.482 -0.622 SeqLogo of UlaR
UvrY 4.324 2.163 SeqLogo of UvrY
UxuR -0.702 -0.368 SeqLogo of UxuR
XapR -3.715 -1.131 SeqLogo of XapR
XylR -1.445 -0.686 SeqLogo of XylR
YdeO -1.343 -0.812 SeqLogo of YdeO
YedW -0.076 -0.006 SeqLogo of YedW
YehT 0.922 0.279 SeqLogo of YehT
YeiL -2.725 -0.810 SeqLogo of YeiL
YiaJ -1.300 -0.543 SeqLogo of YiaJ
YjjQ -2.165 -1.384 SeqLogo of YjjQ
YpdB -3.184 -0.970 SeqLogo of YpdB
YqhC -0.325 -0.099 SeqLogo of YqhC
YqjI -1.382 -0.586 SeqLogo of YqjI
ZntR -1.179 -0.359 SeqLogo of ZntR
ZraR -1.607 -0.660 SeqLogo of ZraR
Zur -1.058 -0.627 SeqLogo of Zur