DANIO-CODE
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Motif name | Z-value | Associated genes | Profile | Logo |
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MAZ | 6.68 |
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tead3a+tead3b | 6.25 |
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tgif1_meis2a_meis1a | 6.12 |
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prdm2a | 5.70 |
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creb1a+creb1b | 5.52 |
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fosaa+fosab+fosl1a_nfya_nfyal | 5.34 |
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si:ch1073-357b18.4 | 4.36 |
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sp1 | 4.19 |
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elf1_etv1_elk3_elk1_erf+erfl3_etv5a+etv5b_gabpa_elk4 | 4.10 |
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hoxb6a+hoxb6b | 4.02 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.