ISMARA results for ENCODE cell lines, H3K27me3 (Ernst 2011)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
All motifs sorted by activity significance
Showing 1 to 50 of 189 entries
| Motif name | Z-value | Associated genes | Profile | Logo |
|---|---|---|---|---|
| SNAI1..3.p2 | 5.233 |
SNAI2
(SLUGH1)
SNAI1 (SNA, SLUGH2, SNAH) SNAI3 (SMUC, Zfp293) |
|
|
| REST.p3 | 4.882 |
REST
(NRSF, XBR)
|
|
|
| FOS_FOS{B,L1}_JUN{B,D}.p2 | 4.621 |
FOS
(c-fos, AP-1)
JUNB FOSL1 (fra-1) JUND (AP-1) FOSB (G0S3, GOSB, GOS3, AP-1, MGC42291, DKFZp686C0818) |
|
|
| HIC1.p2 | 4.194 |
HIC1
(ZBTB29)
|
|
|
| PITX1..3.p2 | 4.033 |
PITX2
(IGDS, RS, Brx1, Otlx2, ARP1)
PITX3 PITX1 (PTX1, POTX) |
|
|
| TFCP2.p2 | 3.985 |
TFCP2
(CP2, LSF, LBP-1C, TFCP2C)
|
|
|
| NRF1.p2 | 3.840 |
NRF1
(EWG, ALPHA-PAL)
|
|
|
| YY1.p2 | 3.775 |
YY1
(NF-E1, DELTA, UCRBP, YIN-YANG-1, INO80S)
|
|
|
| ELK1,4_GABP{A,B1}.p3 | 3.660 |
GABPA
(E4TF1A, NFT2, NRF2, E4TF1-60, NRF2A)
GABPB1 (E4TF1-47, GABPB) ELK4 (SAP1) ELK1 |
|
|
| ZEB1.p2 | 3.620 |
ZEB1
(BZP, ZEB, AREB6, NIL-2-A, Zfhep, Zfhx1a)
|
|
|
| TEAD1.p2 | 3.547 |
TEAD1
(TEF-1)
TEAD2 (ETF, TEF4, TEF-4, TEAD-2) TEAD3 (TEF5, TEAD5, TEF-5, DTEF-1, ETFR-1, TEAD-3) TEAD4 (TEF3, RTEF1, TEF-3, EFTR-2, TEFR-1, TCF13L1, hRTEF-1B) |
|
|
| TFAP2{A,C}.p2 | 3.492 |
TFAP2C
(AP2-GAMMA, ERF1, TFAP2G, hAP-2g)
TFAP2A (AP-2) |
|
|
| MZF1.p2 | 3.306 |
MZF1
(MZF1B, ZSCAN6, MZF-1, Zfp98)
|
|
|
| MAZ.p2 | 3.224 |
MAZ
(ZF87, Pur-1, Zif87, ZNF801)
|
|
|
| HMX1.p2 | 3.131 |
HMX1
(H6, NKX5-3)
|
|
|
| RREB1.p2 | 3.098 |
RREB1
(HNT)
|
|
|
| MYOD1.p2 | 3.037 |
MYOD1
(PUM, MYOD, bHLHc1)
|
|
|
| GTF2I.p2 | 3.001 |
GTF2I
(TFII-I, BAP-135, SPIN, BTKAP1, DIWS, IB291)
|
|
|
| MTF1.p2 | 2.978 |
MTF1
|
|
|
| ZNF423.p2 | 2.958 |
ZNF423
(KIAA0760, OAZ, Roaz, Ebfaz, Zfp104)
|
|
|
| NFE2L1.p2 | 2.922 |
NFE2L1
(NRF1, LCR-F1, FLJ00380, TCF11)
|
|
|
| FOX{D1,D2}.p2 | 2.908 |
FOXD2
(FREAC9)
FOXD1 (FREAC4) |
|
|
| ZIC1..3.p2 | 2.901 |
ZIC1
(ZIC, ZNF201)
ZIC2 (HPE5) ZIC3 (HTX, ZNF203) |
|
|
| MYFfamily.p2 | 2.870 |
MYOD1
(PUM, MYOD, bHLHc1)
MYF6 (MRF4, bHLHc4) MYF5 (bHLHc2) MYOG (bHLHc3) |
|
|
| ZNF143.p2 | 2.846 |
ZNF143
(SBF, pHZ-1, STAF)
|
|
|
| AHR_ARNT_ARNT2.p2 | 2.803 |
ARNT
(HIF-1beta, bHLHe2)
AHR ARNT2 (KIAA0307, bHLHe1) |
|
|
| GATA1..3.p2 | 2.726 |
GATA1
(ERYF1, NFE1)
GATA2 (NFE1B) GATA3 (HDR) |
|
|
| HOX{A6,A7,B6,B7}.p2 | 2.724 |
HOXB6
HOXA7 HOXB7 HOXA6 |
|
|
| HLF.p2 | 2.622 |
HLF
(MGC33822)
|
|
|
| ATF5_CREB3.p2 | 2.621 |
ATF5
CREB3 (LZIP, Luman) |
|
|
| KLF12.p2 | 2.576 |
KLF12
(AP-2rep, HSPC122, AP2REP)
|
|
|
| NHLH1,2.p2 | 2.560 |
NHLH1
(NSCL, NSCL1, bHLHa35)
NHLH2 (NSCL2, bHLHa34) |
|
|
| EHF.p2 | 2.519 |
EHF
|
|
|
| EBF1.p2 | 2.510 |
EBF1
(OLF1)
|
|
|
| bHLH_family.p2 | 2.468 |
ARNTL
(MOP3, JAP3, BMAL1, PASD3, bHLHe5)
MITF (WS2A, MI, bHLHe32) MXI1 (MXD2, MAD2, MXI, bHLHc11) TFE3 (TFEA, bHLHe33) CLOCK (KIAA0334, KAT13D, bHLHe8) OLIG2 (RACK17, OLIGO2, bHLHe19) MXD4 (MAD4, MSTP149, MST149, bHLHc12) HEY2 (bHLHb32) HEY1 (HESR-1, CHF2, HESR1, HRT-1, CHF-2, HERP2, BHLHb31) HEYL (bHLHb33) MLXIPL (WS-bHLH, MIO, CHREBP, MONDOB) HES6 (bHLHc23) MXD3 (MAD3, bHLHc13) ARNTL2 (BMAL2, MOP9, CLIF, PASD9, bHLHe6) ID1 (dJ857M17.1.2, bHLHb24) MNT (ROX, MXD6, MAD6, bHLHd3) OLIG1 (BHLHB6, bHLHe21) NPAS2 (MOP4, PASD4, bHLHe9) |
|
|
| ONECUT1,2.p2 | 2.350 |
ONECUT2
(OC-2)
ONECUT1 (HNF-6) |
|
|
| CRX.p2 | 2.229 |
CRX
(CRD, LCA7, OTX3)
|
|
|
| EN1,2.p2 | 2.224 |
EN1
EN2 |
|
|
| RXR{A,B,G}.p2 | 2.211 |
RXRA
(NR2B1)
RXRB (NR2B2, H-2RIIBP, RCoR-1) RXRG (NR2B3) |
|
|
| MAFB.p2 | 2.208 |
MAFB
|
|
|
| SMAD1..7,9.p2 | 2.208 |
SMAD5
(Dwfc, JV5-1)
SMAD1 (MADR1, JV4-1) SMAD3 (JV15-2, HsT17436) SMAD4 (DPC4) SMAD2 (MADR2, JV18-1) SMAD6 (HsT17432) SMAD7 SMAD9 |
|
|
| TFDP1.p2 | 2.193 |
TFDP1
(Dp-1, DRTF1, DP1)
|
|
|
| SP1.p2 | 2.190 |
SP1
|
|
|
| HBP1_HMGB_SSRP1_UBTF.p2 | 2.180 |
HMGB2
HMGB3 (HMG2A, MGC90319) SSRP1 (FACT80) UBTF (UBF, NOR-90) HBP1 |
|
|
| SPI1.p2 | 2.179 |
SPI1
(PU.1, SPI-A, OF, SFPI1, SPI-1)
|
|
|
| MYB.p2 | 2.127 |
MYB
(c-myb)
|
|
|
| E2F1..5.p2 | 2.120 |
E2F4
(E2F-4)
E2F5 E2F2 (E2F-2) E2F1 (RBP3) E2F3 |
|
|
| CREB1.p2 | 2.080 |
CREB1
|
|
|
| ETS1,2.p2 | 2.029 |
ETS2
ETS1 (FLJ10768, ETS-1) |
|
|
| ZFP161.p2 | 2.013 |
ZFP161
(ZNF478, ZBTB14)
|
|
|
