ISMARA results for ENCODE cell lines, H3K4me1, averaged replicates (Ernst 2011)
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
All motifs sorted by activity significance
Showing 1 to 189 of 189 entries
| Motif name | Z-value | Associated genes | Profile | Logo | 
|---|---|---|---|---|
| PITX1..3.p2 | 9.150 | 
            
            PITX2
            
               (IGDS, RS, Brx1, Otlx2, ARP1)
             PITX3 PITX1 (PTX1, POTX)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HNF1A.p2 | 8.175 | 
            
            HNF1A
            
               (HNF1, LFB1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GATA6.p2 | 7.353 | 
            
            GATA6
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RUNX1..3.p2 | 6.445 | 
            
            RUNX1
            
               (PEBP2A2, AMLCR1)
             RUNX3 (AML2, PEBP2A3) RUNX2 (AML3, PEBP2A1, PEBP2aA1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HNF4A_NR2F1,2.p2 | 6.049 | 
            
            NR2F1
            
               (EAR-3, COUP-TFI, TCFCOUP1, SVP44)
             NR2F2 (COUP-TFII, COUPTFB, SVP40) HNF4A (NR2A1, HNF4)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MEF2{A,B,C,D}.p2 | 5.505 | 
            
            MEF2A
            
               (RSRFC4, RSRFC9)
             MEF2C MEF2D MEF2BNB-MEF2B (MEF2B, LOC729991-MEF2B) MEF2B (RSRFR2, FLJ32648)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HOX{A6,A7,B6,B7}.p2 | 5.281 | 
            
            HOXB6
            
             HOXA7 HOXB7 HOXA6  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EN1,2.p2 | 4.910 | 
            
            EN1
            
             EN2  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SPIB.p2 | 4.680 | 
            
            SPIB
            
               (SPI-B)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HAND1,2.p2 | 4.638 | 
            
            HAND1
            
               (eHand, Thing1, Hxt, bHLHa27)
             HAND2 (dHand, Thing2, Hed, bHLHa26)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TCF4_dimer.p2 | 4.478 | 
            
            TCF4
            
               (E2-2, ITF2, PTHS, SEF2, SEF2-1, SEF2-1A, SEF2-1B, bHLHb19, MGC149723, MGC149724)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TEAD1.p2 | 4.420 | 
            
            TEAD1
            
               (TEF-1)
             TEAD2 (ETF, TEF4, TEF-4, TEAD-2) TEAD3 (TEF5, TEAD5, TEF-5, DTEF-1, ETFR-1, TEAD-3) TEAD4 (TEF3, RTEF1, TEF-3, EFTR-2, TEFR-1, TCF13L1, hRTEF-1B)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOS_FOS{B,L1}_JUN{B,D}.p2 | 4.306 | 
            
            FOS
            
               (c-fos, AP-1)
             JUNB FOSL1 (fra-1) JUND (AP-1) FOSB (G0S3, GOSB, GOS3, AP-1, MGC42291, DKFZp686C0818)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SPI1.p2 | 3.873 | 
            
            SPI1
            
               (PU.1, SPI-A, OF, SFPI1, SPI-1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| KLF4.p3 | 3.872 | 
            
            KLF4
            
               (EZF, GKLF)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NRF1.p2 | 3.696 | 
            
            NRF1
            
               (EWG, ALPHA-PAL)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SNAI1..3.p2 | 3.671 | 
            
            SNAI2
            
               (SLUGH1)
             SNAI1 (SNA, SLUGH2, SNAH) SNAI3 (SMUC, Zfp293)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| IRF1,2,7.p3 | 3.628 | 
            
            IRF1
            
               (MAR, IRF-1)
             IRF2 (IRF-2, DKFZp686F0244) IRF7 (IRF7A, IRF-7H)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| YY1.p2 | 3.611 | 
            
            YY1
            
               (NF-E1, DELTA, UCRBP, YIN-YANG-1, INO80S)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFE2L2.p2 | 3.582 | 
            
            NFE2L2
            
               (NRF2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MTF1.p2 | 3.545 | 
            
            MTF1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZIC1..3.p2 | 3.469 | 
            
            ZIC1
            
               (ZIC, ZNF201)
             ZIC2 (HPE5) ZIC3 (HTX, ZNF203)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RFX1..5_RFXANK_RFXAP.p2 | 3.371 | 
            
            RFX1
            
               (EF-C)
             RFXAP RFX5 RFXANK (BLS, RFX-B, ANKRA1, F14150_1, MGC138628) RFX4 RFX3 RFX2 (FLJ14226)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZNF143.p2 | 3.353 | 
            
            ZNF143
            
               (SBF, pHZ-1, STAF)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| CTCF.p2 | 3.279 | 
            
            CTCF
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ELF1,2,4.p2 | 3.160 | 
            
            ELF2
            
               (EU32, NERF, NERF-2, NERF-1A, NERF-1B)
             ELF1 ELF4 (MEF, ELFR)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TLX1..3_NFIC{dimer}.p2 | 3.145 | 
            
            TLX1
            
             TLX3 (RNX)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FEV.p2 | 3.133 | 
            
            FEV
            
               (PET-1, HSRNAFEV)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EVI1.p2 | 3.065 | 
            
            EVI1
            
               (MDS1-EVI1, PRDM3)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ELK1,4_GABP{A,B1}.p3 | 3.040 | 
            
            GABPA
            
               (E4TF1A, NFT2, NRF2, E4TF1-60, NRF2A)
             GABPB1 (E4TF1-47, GABPB) ELK4 (SAP1) ELK1  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NKX2-1,4.p2 | 3.020 | 
            
            NKX2-1
            
               (TTF-1)
             NKX2-4 (NKX2.4)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFY{A,B,C}.p2 | 2.979 | 
            
            NFYC
            
               (CBF-C)
             NFYB (CBF-A, HAP3) NFYA (HAP2, CBF-B)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| POU2F1..3.p2 | 2.890 | 
            
            POU2F2
            
               (OCT2)
             POU2F1 (OCT1) POU2F3 (OCT11, PLA-1, Skn-1a, Epoc-1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOXA2.p3 | 2.886 | 
            
            FOXA2
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HOX{A5,B5}.p2 | 2.882 | 
            
            HOXB5
            
             HOXA5  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ETS1,2.p2 | 2.838 | 
            
            ETS2
            
             ETS1 (FLJ10768, ETS-1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| POU5F1.p2 | 2.837 | 
            
            POU5F1
            
               (OCT3, Oct4, MGC22487)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| DBP.p2 | 2.814 | 
            
            DBP
            
               (DABP)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GTF2A1,2.p2 | 2.812 | 
            
            GTF2A1
            
               (TFIIA)
             GTF2A2 (TFIIA, HsT18745)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MYOD1.p2 | 2.763 | 
            
            MYOD1
            
               (PUM, MYOD, bHLHc1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TGIF1.p2 | 2.680 | 
            
            TGIF1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HBP1_HMGB_SSRP1_UBTF.p2 | 2.580 | 
            
            HMGB2
            
             HMGB3 (HMG2A, MGC90319) SSRP1 (FACT80) UBTF (UBF, NOR-90) HBP1  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HLF.p2 | 2.568 | 
            
            HLF
            
               (MGC33822)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFKB1_REL_RELA.p2 | 2.556 | 
            
            RELA
            
               (p65)
             REL (I-Rel) NFKB1 (KBF1, p105)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOXL1.p2 | 2.541 | 
            
            FOXL1
            
               (FREAC7, FKH6)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MYFfamily.p2 | 2.536 | 
            
            MYOD1
            
               (PUM, MYOD, bHLHc1)
             MYF6 (MRF4, bHLHc4) MYF5 (bHLHc2) MYOG (bHLHc3)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GATA1..3.p2 | 2.521 | 
            
            GATA1
            
               (ERYF1, NFE1)
             GATA2 (NFE1B) GATA3 (HDR)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NR5A1,2.p2 | 2.499 | 
            
            NR5A1
            
               (FTZ1, SF-1, ELP, AD4BP)
             NR5A2 (FTZ-F1beta, hB1F, LRH-1, FTZ-F1, hB1F-2, B1F2)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MAZ.p2 | 2.487 | 
            
            MAZ
            
               (ZF87, Pur-1, Zif87, ZNF801)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| E2F1..5.p2 | 2.484 | 
            
            E2F4
            
               (E2F-4)
             E2F5 E2F2 (E2F-2) E2F1 (RBP3) E2F3  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZNF238.p2 | 2.469 | 
            
            ZNF238
            
               (C2H2-171, TAZ-1, RP58, ZBTB18)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SP1.p2 | 2.467 | 
            
            SP1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GFI1B.p2 | 2.443 | 
            
            GFI1B
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| DMAP1_NCOR{1,2}_SMARC.p2 | 2.424 | 
            
            SMARCA1
            
               (SNF2LB, NURF140, ISWI, SWI)
             SMARCC2 (BAF170, Rsc8, CRACC2) SMARCA5 (hSNF2H, hISWI, ISWI) NCOR1 (N-CoR, hCIT529I10, TRAC1, hN-CoR, KIAA1047, MGC104216) NCOR2 (SMRT, SMRTE, TRAC-1, CTG26, TNRC14) DMAP1 (DNMAP1, FLJ11543, KIAA1425, DNMTAP1, EAF2, SWC4)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| AHR_ARNT_ARNT2.p2 | 2.400 | 
            
            ARNT
            
               (HIF-1beta, bHLHe2)
             AHR ARNT2 (KIAA0307, bHLHe1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SMAD1..7,9.p2 | 2.399 | 
            
            SMAD5
            
               (Dwfc, JV5-1)
             SMAD1 (MADR1, JV4-1) SMAD3 (JV15-2, HsT17436) SMAD4 (DPC4) SMAD2 (MADR2, JV18-1) SMAD6 (HsT17432) SMAD7 SMAD9  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| bHLH_family.p2 | 2.388 | 
            
            ARNTL
            
               (MOP3, JAP3, BMAL1, PASD3, bHLHe5)
             MITF (WS2A, MI, bHLHe32) MXI1 (MXD2, MAD2, MXI, bHLHc11) TFE3 (TFEA, bHLHe33) CLOCK (KIAA0334, KAT13D, bHLHe8) OLIG2 (RACK17, OLIGO2, bHLHe19) MXD4 (MAD4, MSTP149, MST149, bHLHc12) HEY2 (bHLHb32) HEY1 (HESR-1, CHF2, HESR1, HRT-1, CHF-2, HERP2, BHLHb31) HEYL (bHLHb33) MLXIPL (WS-bHLH, MIO, CHREBP, MONDOB) HES6 (bHLHc23) MXD3 (MAD3, bHLHc13) ARNTL2 (BMAL2, MOP9, CLIF, PASD9, bHLHe6) ID1 (dJ857M17.1.2, bHLHb24) MNT (ROX, MXD6, MAD6, bHLHd3) OLIG1 (BHLHB6, bHLHe21) NPAS2 (MOP4, PASD4, bHLHe9)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NR1H4.p2 | 2.384 | 
            
            NR1H4
            
               (FXR, RIP14, HRR1, HRR-1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOXP3.p2 | 2.364 | 
            
            FOXP3
            
               (JM2, XPID, AIID, PIDX, DIETER, SCURFIN)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GFI1.p2 | 2.363 | 
            
            GFI1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ONECUT1,2.p2 | 2.343 | 
            
            ONECUT2
            
               (OC-2)
             ONECUT1 (HNF-6)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFE2.p2 | 2.330 | 
            
            NFE2
            
               (NF-E2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| POU6F1.p2 | 2.316 | 
            
            POU6F1
            
               (BRN5, MPOU, TCFB1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2 | 2.300 | 
            
            ARNT
            
               (HIF-1beta, bHLHe2)
             MAX (bHLHd4) MYC (c-Myc, bHLHe39) USF1 (UEF, MLTFI, bHLHb11) BHLHB2 (DEC1, bHLHe40) ARNT2 (KIAA0307, bHLHe1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MSX1,2.p2 | 2.277 | 
            
            MSX1
            
               (HYD1, OFC5)
             MSX2 (CRS2, FPP, HOX8, MSH, PFM)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| JUN.p2 | 2.235 | 
            
            JUN
            
               (c-Jun, AP-1)
             JUND (AP-1) JUNB  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NHLH1,2.p2 | 2.230 | 
            
            NHLH1
            
               (NSCL, NSCL1, bHLHa35)
             NHLH2 (NSCL2, bHLHa34)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HIC1.p2 | 2.218 | 
            
            HIC1
            
               (ZBTB29)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ARID5B.p2 | 2.192 | 
            
            ARID5B
            
               (FLJ21150, MRF2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GTF2I.p2 | 2.143 | 
            
            GTF2I
            
               (TFII-I, BAP-135, SPIN, BTKAP1, DIWS, IB291)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HSF1,2.p2 | 2.141 | 
            
            HSF1
            
               (HSTF1)
             HSF2  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EOMES.p2 | 2.127 | 
            
            EOMES
            
               (TBR2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| CEBPA,B_DDIT3.p2 | 2.109 | 
            
            DDIT3
            
               (CHOP10, GADD153, CHOP)
             CEBPA (C/EBP-alpha) CEBPB (LAP, CRP2, NFIL6, IL6DBP)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MZF1.p2 | 2.055 | 
            
            MZF1
            
               (MZF1B, ZSCAN6, MZF-1, Zfp98)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PRRX1,2.p2 | 2.042 | 
            
            PRRX2
            
               (PRX2, PMX2)
             PRRX1 (PHOX1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PATZ1.p2 | 2.036 | 
            
            PATZ1
            
               (MAZR, dJ400N23, ZBTB19, ZSG, RIAZ, PATZ)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| T.p2 | 2.025 | 
            
            T
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NR3C1.p2 | 2.025 | 
            
            NR3C1
            
               (GR)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HOX{A4,D4}.p2 | 2.022 | 
            
            HOXA4
            
             HOXD4  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TBX4,5.p2 | 1.979 | 
            
            TBX5
            
             TBX4  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFE2L1.p2 | 1.956 | 
            
            NFE2L1
            
               (NRF1, LCR-F1, FLJ00380, TCF11)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SRF.p3 | 1.930 | 
            
            SRF
            
               (MCM1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EHF.p2 | 1.928 | 
            
            EHF
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PRDM1.p3 | 1.926 | 
            
            PRDM1
            
               (PRDI-BF1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZEB1.p2 | 1.922 | 
            
            ZEB1
            
               (BZP, ZEB, AREB6, NIL-2-A, Zfhep, Zfhx1a)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ATF5_CREB3.p2 | 1.921 | 
            
            ATF5
            
             CREB3 (LZIP, Luman)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOSL2.p2 | 1.909 | 
            
            FOSL2
            
               (FRA2, FLJ23306)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RBPJ.p2 | 1.904 | 
            
            RBPJ
            
               (SUH, IGKJRB, RBPJK, KBF2, RBP-J, CBF1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOX{I1,J2}.p2 | 1.869 | 
            
            FOXI1
            
               (FREAC6)
             FOXJ2 (FHX)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ATF2.p2 | 1.833 | 
            
            ATF2
            
               (TREB7, CRE-BP1, HB16)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EGR1..3.p2 | 1.830 | 
            
            EGR3
            
               (PILOT)
             EGR1 (TIS8, G0S30, NGFI-A, KROX-24, ZIF-268, AT225, ZNF225) EGR2  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PAX5.p2 | 1.824 | 
            
            PAX5
            
               (BSAP)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MAFB.p2 | 1.822 | 
            
            MAFB
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZFP161.p2 | 1.813 | 
            
            ZFP161
            
               (ZNF478, ZBTB14)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ESRRA.p2 | 1.798 | 
            
            ESRRA
            
               (ERR1, ERRalpha, NR3B1, ERRa)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GLI1..3.p2 | 1.765 | 
            
            GLI1
            
             GLI2 (THP2, HPE9, THP1) GLI3 (PAP-A, PAPA, PAPA1, PAPB, ACLS, PPDIV)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| LEF1_TCF7_TCF7L1,2.p2 | 1.738 | 
            
            TCF7
            
               (TCF-1)
             TCF7L2 (TCF-4) LEF1 (TCF1ALPHA) TCF7L1  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFATC1..3.p2 | 1.733 | 
            
            NFATC3
            
               (NFAT4, NFATX)
             NFATC2 (NF-ATP, NFATp, NFAT1) NFATC1 (NF-ATC, NFATc, NFAT2)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| LMO2.p2 | 1.723 | 
            
            LMO2
            
               (TTG2, RHOM2, RBTN2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| KLF12.p2 | 1.719 | 
            
            KLF12
            
               (AP-2rep, HSPC122, AP2REP)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RXRA_VDR{dimer}.p2 | 1.700 | 
            
            VDR
            
               (NR1I1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EBF1.p2 | 1.699 | 
            
            EBF1
            
               (OLF1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| POU5F1_SOX2{dimer}.p2 | 1.698 | 
            
            POU5F1
            
               (OCT3, Oct4, MGC22487)
             SOX2  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TFDP1.p2 | 1.673 | 
            
            TFDP1
            
               (Dp-1, DRTF1, DP1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| CRX.p2 | 1.665 | 
            
            CRX
            
               (CRD, LCA7, OTX3)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOXO1,3,4.p2 | 1.663 | 
            
            FOXO1
            
               (FKH1)
             FOXO4 (AFX1) FOXO3 (AF6q21, FOXO2)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HES1.p2 | 1.656 | 
            
            HES1
            
               (FLJ20408, HES-1, Hes1, bHLHb39)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NR6A1.p2 | 1.634 | 
            
            NR6A1
            
               (GCNF1, RTR)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| POU3F1..4.p2 | 1.623 | 
            
            POU3F1
            
               (OCT6, SCIP)
             POU3F3 (BRN1, OTF8) POU3F2 (POUF3, BRN2, OCT7) POU3F4 (BRN4, OTF9)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TBP.p2 | 1.617 | 
            
            TBP
            
               (TFIID)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NANOG{mouse}.p2 | 1.601 | 
            
            NANOG
            
               (FLJ12581, FLJ40451)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZBTB16.p2 | 1.594 | 
            
            ZBTB16
            
               (PLZF)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HOXA9_MEIS1.p2 | 1.594 | 
            
            MEIS1
            
             HOXA9  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NKX6-1,2.p2 | 1.591 | 
            
            NKX6-1
            
               (Nkx6.1)
             NKX6-2 (NKX6B, GTX, NKX6.1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ATF4.p2 | 1.589 | 
            
            ATF4
            
               (TAXREB67, CREB-2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HMX1.p2 | 1.573 | 
            
            HMX1
            
               (H6, NKX5-3)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| BPTF.p2 | 1.563 | 
            
            BPTF
            
               (FAC1, NURF301)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| BACH2.p2 | 1.553 | 
            
            BACH2
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RXR{A,B,G}.p2 | 1.541 | 
            
            RXRA
            
               (NR2B1)
             RXRB (NR2B2, H-2RIIBP, RCoR-1) RXRG (NR2B3)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| CDX1,2,4.p2 | 1.541 | 
            
            CDX1
            
             CDX2 CDX4  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| VSX1,2.p2 | 1.539 | 
            
            VSX2
            
               (RET1)
             VSX1 (PPD)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NKX3-1.p2 | 1.534 | 
            
            NKX3-1
            
               (NKX3.1, BAPX2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NKX2-2,8.p2 | 1.531 | 
            
            NKX2-2
            
               (NKX2.2)
             NKX2-8 (NKX2.8, Nkx2-9)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TFCP2.p2 | 1.512 | 
            
            TFCP2
            
               (CP2, LSF, LBP-1C, TFCP2C)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOX{C1,C2}.p2 | 1.504 | 
            
            FOXC1
            
               (FREAC3, ARA, IGDA, IHG1)
             FOXC2 (MFH-1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOX{F1,F2,J1}.p2 | 1.490 | 
            
            FOXF2
            
               (FREAC2)
             FOXJ1 (HFH-4, HFH4) FOXF1 (FREAC1)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PBX1.p2 | 1.487 | 
            
            PBX1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TLX2.p2 | 1.486 | 
            
            TLX2
            
               (Enx, Tlx2, NCX)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NANOG.p2 | 1.478 | 
            
            NANOG
            
               (FLJ12581, FLJ40451)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PAX4.p2 | 1.459 | 
            
            PAX4
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOXD3.p2 | 1.451 | 
            
            FOXD3
            
               (Genesis, HFH2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOX{D1,D2}.p2 | 1.450 | 
            
            FOXD2
            
               (FREAC9)
             FOXD1 (FREAC4)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TFAP4.p2 | 1.438 | 
            
            TFAP4
            
               (AP-4)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOXN1.p2 | 1.425 | 
            
            FOXN1
            
               (FKHL20)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RREB1.p2 | 1.420 | 
            
            RREB1
            
               (HNT)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NKX2-3_NKX2-5.p2 | 1.417 | 
            
            NKX2-5
            
               (CSX1, NKX2.5, NKX4-1)
             NKX2-3 (NKX2.3, CSX3, NKX4-3)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZNF384.p2 | 1.391 | 
            
            ZNF384
            
               (CAGH1A, CIZ, NMP4, NP)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| POU1F1.p2 | 1.363 | 
            
            POU1F1
            
               (GHF-1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SOX{8,9,10}.p2 | 1.356 | 
            
            SOX9
            
               (SRA1)
             SOX8 SOX10 (DOM, WS4, WS2E)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| STAT2,4,6.p2 | 1.355 | 
            
            STAT2
            
               (STAT113)
             STAT4 STAT6 (D12S1644, IL-4-STAT)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EWSR1-FLI1.p2 | 1.339 | 
            
            FLI1
            
               (EWSR2, SIC-1)
             EWSR1 (EWS, K984G1.4)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| STAT1,3.p3 | 1.338 | 
            
            STAT1
            
               (STAT91, ISGF-3)
             STAT3 (APRF)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFIL3.p2 | 1.333 | 
            
            NFIL3
            
               (E4BP4, NFIL3A, NF-IL3A)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TAL1_TCF{3,4,12}.p2 | 1.310 | 
            
            TCF3
            
               (E2A, ITF1, MGC129647, MGC129648, bHLHb21)
             TCF4 (SEF2-1B, ITF2, bHLHb19) TAL1 (SCL, bHLHa17) TCF12 (HEB, HTF4, HsT17266, bHLHb20)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| EP300.p2 | 1.300 | 
            
            EP300
            
               (p300, KAT3B)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NFIX.p2 | 1.293 | 
            
            NFIX
            
               (NF1A)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PAX2.p2 | 1.285 | 
            
            PAX2
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| CUX2.p2 | 1.282 | 
            
            CUX2
            
               (KIAA0293, CDP2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| CREB1.p2 | 1.280 | 
            
            CREB1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RXRG_dimer.p3 | 1.275 | 
            
            NR1H2
            
               (NER, NER-I, RIP15, LXR-b)
             RXRA (NR2B1) PPARG (PPARG1, PPARG2, NR1C3, PPARgamma) PPARA (hPPAR, NR1C1) RXRB (NR2B2, H-2RIIBP, RCoR-1) RXRG (NR2B3)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TFAP2B.p2 | 1.270 | 
            
            TFAP2B
            
               (AP2-B)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZNF148.p2 | 1.265 | 
            
            ZNF148
            
               (BERF-1, ZBP-89, BFCOL1, HT-BETA, ZFP148, pHZ-52)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SRY.p2 | 1.230 | 
            
            SRY
            
               (TDF)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| XBP1.p3 | 1.224 | 
            
            XBP1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HMGA1,2.p2 | 1.211 | 
            
            HMGA1
            
             HMGA2 (BABL, LIPO)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PPARG.p2 | 1.202 | 
            
            PPARG
            
               (PPARG1, PPARG2, NR1C3, PPARgamma)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| AR.p2 | 1.198 | 
            
            AR
            
               (AIS, NR3C4, SMAX1, HUMARA)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| NKX3-2.p2 | 1.187 | 
            
            NKX3-2
            
               (NKX3B, NKX3.2)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SOX2.p2 | 1.168 | 
            
            SOX2
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SPZ1.p2 | 1.152 | 
            
            SPZ1
            
               (NYD-TSP1, FLJ25709)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TFAP2{A,C}.p2 | 1.144 | 
            
            TFAP2C
            
               (AP2-GAMMA, ERF1, TFAP2G, hAP-2g)
             TFAP2A (AP-2)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MYBL2.p2 | 1.143 | 
            
            MYBL2
            
               (BMYB, B-MYB)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SOX5.p2 | 1.106 | 
            
            SOX5
            
               (L-SOX5, MGC35153)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| FOXQ1.p2 | 1.103 | 
            
            FOXQ1
            
               (HFH1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| AIRE.p2 | 1.048 | 
            
            AIRE
            
               (PGA1, APS1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TP53.p2 | 1.045 | 
            
            TP53
            
               (p53, LFS1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| REST.p3 | 1.037 | 
            
            REST
            
               (NRSF, XBR)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ADNP_IRX_SIX_ZHX.p2 | 1.007 | 
            
            SIX5
            
             ZHX1 IRX4 ADNP (KIAA0784, ADNP1) ZHX3 (KIAA0395) ZHX2 (KIAA0854) IRX5 (IRX-2a) SIX2  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| RORA.p2 | 0.997 | 
            
            RORA
            
               (RZRA, ROR1, ROR2, ROR3, NR1F1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SREBF1,2.p2 | 0.992 | 
            
            SREBF1
            
               (SREBP1, bHLHd1)
             SREBF2 (SREBP2, bHLHd2)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ALX1.p2 | 0.968 | 
            
            ALX1
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| STAT5{A,B}.p2 | 0.958 | 
            
            STAT5B
            
             STAT5A (MGF)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| MYB.p2 | 0.951 | 
            
            MYB
            
               (c-myb)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZBTB6.p2 | 0.921 | 
            
            ZBTB6
            
               (ZID)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| TFEB.p2 | 0.917 | 
            
            TFEB
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| LHX3,4.p2 | 0.878 | 
            
            LHX3
            
             LHX4 (Gsh4)  | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| IKZF2.p2 | 0.876 | 
            
            IKZF2
            
               (Helios)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ESR1.p2 | 0.861 | 
            
            ESR1
            
               (NR3A1, Era)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| IKZF1.p2 | 0.854 | 
            
            IKZF1
            
               (hIk-1, LyF-1, Hs.54452, IKAROS)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PDX1.p2 | 0.820 | 
            
            PDX1
            
               (IDX-1, STF-1, PDX-1, MODY4)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| CDC5L.p2 | 0.815 | 
            
            CDC5L
            
               (PCDC5RP, hCDC5, CEF1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PAX6.p2 | 0.807 | 
            
            PAX6
            
               (D11S812E, AN, WAGR)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| GZF1.p2 | 0.763 | 
            
            GZF1
            
               (dJ322G13.2, ZBTB23)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| HIF1A.p2 | 0.642 | 
            
            HIF1A
            
               (MOP1, HIF-1alpha, PASD8, HIF1)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ZNF423.p2 | 0.576 | 
            
            ZNF423
            
               (KIAA0760, OAZ, Roaz, Ebfaz, Zfp104)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| SOX17.p2 | 0.543 | 
            
            SOX17
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| ATF6.p2 | 0.534 | 
            
            ATF6
            
               (ATF6A)
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PAX8.p2 | 0.371 | 
            
            PAX8
            
             | 
      
        
           
        
       | 
      
              
          
         
       | 
    
| PAX3,7.p2 | 0.141 | 
            
            PAX7
            
               (Hup1)
             PAX3 (HUP2)  | 
      
        
           
        
       | 
      
              
          
         
       |