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GSE67402: E.coli regulatory changes under long-term starvation
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Sample name: 003_hr_rep1
Sorted Z-values for 003_hr_rep1
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| Sigma70 | 4.302 |
|
|
| Cra | 3.266 |
|
|
| CueR | 3.236 |
|
|
| MalT | 3.013 |
|
|
| NtrC | 2.752 |
|
|
| CysB | 2.538 |
|
|
| ArcA | 2.457 |
|
|
| Sigma32 | 2.088 |
|
|
| FNR | 2.087 |
|
|
| FadR | 1.913 |
|
|
| MetJ | 1.776 |
|
|
| HypT | 1.726 |
|
|
| Sigma24 | 1.718 |
|
|
| SoxS | 1.659 |
|
|
| ModE | 1.577 |
|
|
| GadE | 1.532 |
|
|
| TrpR | 1.529 |
|
|
| CRP | 1.529 |
|
|
| CusR | 1.423 |
|
|
| YedW | 1.423 |
|
|
| FlhDC | 1.347 |
|
|
| CpxR | 1.274 |
|
|
| HdfR | 1.201 |
|
|
| MlrA | 1.190 |
|
|
| CspA | 1.172 |
|
|
| TyrR | 1.163 |
|
|
| IlvY | 1.080 |
|
|
| PurR | 1.012 |
|
|
| PdhR | 0.997 |
|
|
| StpA | 0.959 |
|
|
| PutA | 0.943 |
|
|
| YehT | 0.874 |
|
|
| DnaA | 0.811 |
|
|
| HcaR | 0.808 |
|
|
| RstA | 0.803 |
|
|
| ZntR | 0.780 |
|
|
| DeoR | 0.731 |
|
|
| KdgR | 0.702 |
|
|
| MprA | 0.691 |
|
|
| ArgP | 0.672 |
|
|
| QseB | 0.634 |
|
|
| MetR | 0.617 |
|
|
| AlaS | 0.616 |
|
|
| Cbl | 0.591 |
|
|
| DhaR | 0.587 |
|
|
| MarA | 0.566 |
|
|
| NhaR | 0.544 |
|
|
| PepA | 0.538 |
|
|
| NrdR | 0.536 |
|
|
| RbsR | 0.534 |
|
|
| OmpR | 0.517 |
|
|
| YqjI | 0.488 |
|
|
| AscG | 0.444 |
|
|
| MqsA | 0.437 |
|
|
| AlsR | 0.435 |
|
|
| MazE-MazF | 0.432 |
|
|
| MazE | 0.432 |
|
|
| GcvA | 0.430 |
|
|
| CreB | 0.403 |
|
|
| LldR | 0.383 |
|
|
| EnvR | 0.368 |
|
|
| GalS | 0.362 |
|
|
| GalR | 0.362 |
|
|
| MurR | 0.348 |
|
|
| GadX | 0.333 |
|
|
| XylR | 0.306 |
|
|
| Sigma19 | 0.298 |
|
|
| CytR | 0.284 |
|
|
| LrhA | 0.283 |
|
|
| AdiY | 0.278 |
|
|
| AccB | 0.264 |
|
|
| LeuO | 0.257 |
|
|
| ArgR | 0.238 |
|
|
| CsgD | 0.234 |
|
|
| EnvY | 0.233 |
|
|
| CdaR | 0.233 |
|
|
| IclR | 0.220 |
|
|
| FabR | 0.207 |
|
|
| PuuR | 0.204 |
|
|
| NemR | 0.193 |
|
|
| BluR | 0.190 |
|
|
| GutM | 0.165 |
|
|
| HipB | 0.162 |
|
|
| CecR | 0.140 |
|
|
| Mlc | 0.122 |
|
|
| CsiR | 0.121 |
|
|
| MraZ | 0.106 |
|
|
| HipAB | 0.085 |
|
|
| SdiA | 0.073 |
|
|
| GlrR | 0.054 |
|
|
| ZraR | 0.051 |
|
|
| RtcR | 0.047 |
|
|
| AsnC | 0.025 |
|
|
| Nac | 0.018 |
|
|
| NikR | 0.016 |
|
|
| FhlA | 0.012 |
|
|
| RelB | 0.001 |
|
|
| SgrR | -0.004 |
|
|
| NagC | -0.047 |
|
|
| HU | -0.052 |
|
|
| RhaR | -0.054 |
|
|
| KdpE | -0.059 |
|
|
| Rob | -0.062 |
|
|
| BaeR | -0.109 |
|
|
| TdcA | -0.130 |
|
|
| ArsR | -0.132 |
|
|
| TreR | -0.133 |
|
|
| RcsB | -0.148 |
|
|
| ChbR | -0.156 |
|
|
| Lrp | -0.159 |
|
|
| HyfR | -0.166 |
|
|
| FucR | -0.170 |
|
|
| MatA | -0.171 |
|
|
| AppY | -0.200 |
|
|
| NorR | -0.252 |
|
|
| AtoC | -0.278 |
|
|
| UidR | -0.289 |
|
|
| SlyA | -0.290 |
|
|
| AllS | -0.298 |
|
|
| MalI | -0.304 |
|
|
| AidB | -0.316 |
|
|
| AcrR | -0.318 |
|
|
| YeiL | -0.340 |
|
|
| YpdB | -0.341 |
|
|
| MtlR | -0.347 |
|
|
| GadW | -0.355 |
|
|
| SutR | -0.355 |
|
|
| MhpR | -0.359 |
|
|
| IHF | -0.364 |
|
|
| DpiA | -0.371 |
|
|
| OxyR | -0.381 |
|
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| CynR | -0.383 |
|
|
| BasR | -0.384 |
|
|
| YqhC | -0.411 |
|
|
| BolA | -0.426 |
|
|
| IscR | -0.427 |
|
|
| BirA | -0.433 |
|
|
| UvrY | -0.459 |
|
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| MarR | -0.459 |
|
|
| GntR | -0.466 |
|
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| LysR | -0.478 |
|
|
| Ada | -0.487 |
|
|
| FliZ | -0.511 |
|
|
| NarL | -0.520 |
|
|
| RclR | -0.526 |
|
|
| PhoP | -0.547 |
|
|
| NimR | -0.547 |
|
|
| MngR | -0.560 |
|
|
| GatR | -0.566 |
|
|
| XapR | -0.570 |
|
|
| LacI | -0.577 |
|
|
| Zur | -0.586 |
|
|
| NadR | -0.601 |
|
|
| PrpR | -0.615 |
|
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| DicA | -0.660 |
|
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| UhpA | -0.665 |
|
|
| EbgR | -0.667 |
|
|
| BetI | -0.667 |
|
|
| YiaJ | -0.671 |
|
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| GlcC | -0.672 |
|
|
| SoxR | -0.675 |
|
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| MelR | -0.679 |
|
|
| DcuR | -0.723 |
|
|
| NsrR | -0.741 |
|
|
| FeaR | -0.741 |
|
|
| RhaS | -0.745 |
|
|
| GadE-RcsB | -0.780 |
|
|
| RutR | -0.783 |
|
|
| MntR | -0.789 |
|
|
| PhoB | -0.799 |
|
|
| ExuR | -0.802 |
|
|
| PgrR | -0.807 |
|
|
| CaiF | -0.902 |
|
|
| TorR | -0.913 |
|
|
| CadC | -0.950 |
|
|
| UlaR | -1.029 |
|
|
| PaaX | -1.030 |
|
|
| DsdC | -1.059 |
|
|
| LsrR | -1.066 |
|
|
| YdeO | -1.068 |
|
|
| McbR | -1.081 |
|
|
| Dan | -1.089 |
|
|
| RcdA | -1.119 |
|
|
| UxuR | -1.159 |
|
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| DinJ-YafQ | -1.160 |
|
|
| ComR | -1.182 |
|
|
| IdnR | -1.211 |
|
|
| PspF | -1.324 |
|
|
| RcsAB | -1.326 |
|
|
| AgaR | -1.338 |
|
|
| YjjQ | -1.528 |
|
|
| AllR | -1.530 |
|
|
| EvgA | -1.610 |
|
|
| NarP | -1.640 |
|
|
| Sigma28 | -1.744 |
|
|
| AraC | -1.786 |
|
|
| Sigma38 | -1.789 |
|
|
| LexA | -1.925 |
|
|
| NanR | -2.085 |
|
|
| Sigma54 | -2.329 |
|
|
| Fur | -2.332 |
|
|
| GlpR | -2.523 |
|
|
| RcsB-BglJ | -2.712 |
|
|
| Fis | -3.731 |
|
|
| H-NS | -4.993 |
|
|