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GSE67402: E.coli regulatory changes under long-term starvation
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Sample name: 004_hr_rep1
Sorted Z-values for 004_hr_rep1
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| Sigma70 | 5.058 |
|
|
| NtrC | 4.676 |
|
|
| PurR | 3.397 |
|
|
| Cra | 2.920 |
|
|
| MalT | 2.675 |
|
|
| Sigma24 | 2.341 |
|
|
| CueR | 2.318 |
|
|
| CysB | 2.135 |
|
|
| ArgP | 1.756 |
|
|
| SoxS | 1.587 |
|
|
| ArcA | 1.450 |
|
|
| HypT | 1.355 |
|
|
| GadE | 1.310 |
|
|
| PuuR | 1.279 |
|
|
| MlrA | 1.278 |
|
|
| CusR | 1.246 |
|
|
| YedW | 1.246 |
|
|
| MetJ | 1.205 |
|
|
| PdhR | 1.194 |
|
|
| CspA | 1.085 |
|
|
| FlhDC | 1.072 |
|
|
| HdfR | 1.031 |
|
|
| IlvY | 0.999 |
|
|
| ModE | 0.976 |
|
|
| FNR | 0.913 |
|
|
| ZntR | 0.911 |
|
|
| AsnC | 0.901 |
|
|
| FadR | 0.879 |
|
|
| TyrR | 0.752 |
|
|
| CpxR | 0.750 |
|
|
| MprA | 0.723 |
|
|
| AlaS | 0.713 |
|
|
| TrpR | 0.703 |
|
|
| RstA | 0.656 |
|
|
| AccB | 0.603 |
|
|
| KdgR | 0.595 |
|
|
| MazE-MazF | 0.588 |
|
|
| MazE | 0.588 |
|
|
| Sigma32 | 0.586 |
|
|
| Fur | 0.523 |
|
|
| CytR | 0.523 |
|
|
| FabR | 0.522 |
|
|
| StpA | 0.516 |
|
|
| EnvY | 0.516 |
|
|
| RbsR | 0.506 |
|
|
| Sigma19 | 0.495 |
|
|
| YehT | 0.482 |
|
|
| PepA | 0.482 |
|
|
| PspF | 0.455 |
|
|
| NhaR | 0.441 |
|
|
| Nac | 0.433 |
|
|
| GcvA | 0.420 |
|
|
| DhaR | 0.419 |
|
|
| SgrR | 0.387 |
|
|
| PhoP | 0.371 |
|
|
| AscG | 0.360 |
|
|
| LldR | 0.343 |
|
|
| DeoR | 0.334 |
|
|
| QseB | 0.295 |
|
|
| MetR | 0.290 |
|
|
| DnaA | 0.288 |
|
|
| PutA | 0.288 |
|
|
| SdiA | 0.280 |
|
|
| Rob | 0.255 |
|
|
| GalS | 0.216 |
|
|
| GalR | 0.216 |
|
|
| NrdR | 0.215 |
|
|
| EnvR | 0.206 |
|
|
| Mlc | 0.193 |
|
|
| ArgR | 0.183 |
|
|
| MraZ | 0.173 |
|
|
| CsgD | 0.167 |
|
|
| SutR | 0.165 |
|
|
| AcrR | 0.156 |
|
|
| LrhA | 0.156 |
|
|
| Cbl | 0.149 |
|
|
| BetI | 0.143 |
|
|
| FliZ | 0.092 |
|
|
| NagC | 0.077 |
|
|
| ArsR | 0.074 |
|
|
| YqjI | 0.074 |
|
|
| BasR | 0.062 |
|
|
| GadX | 0.061 |
|
|
| AdiY | 0.054 |
|
|
| CecR | 0.048 |
|
|
| HipAB | 0.044 |
|
|
| CsiR | 0.040 |
|
|
| AlsR | 0.034 |
|
|
| MarA | 0.009 |
|
|
| ChbR | 0.002 |
|
|
| BirA | -0.015 |
|
|
| NemR | -0.019 |
|
|
| GutM | -0.036 |
|
|
| FhlA | -0.038 |
|
|
| RhaR | -0.055 |
|
|
| HU | -0.060 |
|
|
| Lrp | -0.061 |
|
|
| HipB | -0.081 |
|
|
| IscR | -0.087 |
|
|
| ZraR | -0.090 |
|
|
| TdcA | -0.111 |
|
|
| AppY | -0.125 |
|
|
| CreB | -0.161 |
|
|
| GlrR | -0.163 |
|
|
| HyfR | -0.169 |
|
|
| HcaR | -0.176 |
|
|
| NadR | -0.184 |
|
|
| NikR | -0.206 |
|
|
| RelB | -0.208 |
|
|
| CRP | -0.211 |
|
|
| SlyA | -0.214 |
|
|
| YiaJ | -0.215 |
|
|
| LysR | -0.222 |
|
|
| MtlR | -0.236 |
|
|
| PgrR | -0.238 |
|
|
| BolA | -0.247 |
|
|
| AtoC | -0.262 |
|
|
| MelR | -0.265 |
|
|
| BaeR | -0.267 |
|
|
| TreR | -0.269 |
|
|
| GadW | -0.271 |
|
|
| MalI | -0.278 |
|
|
| MhpR | -0.286 |
|
|
| YeiL | -0.303 |
|
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| MatA | -0.310 |
|
|
| LeuO | -0.316 |
|
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| UvrY | -0.326 |
|
|
| MurR | -0.330 |
|
|
| MarR | -0.349 |
|
|
| IHF | -0.355 |
|
|
| CdaR | -0.357 |
|
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| SoxR | -0.368 |
|
|
| GntR | -0.373 |
|
|
| LacI | -0.404 |
|
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| AllS | -0.410 |
|
|
| MqsA | -0.418 |
|
|
| YqhC | -0.418 |
|
|
| EbgR | -0.441 |
|
|
| RcsAB | -0.445 |
|
|
| NorR | -0.457 |
|
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| MntR | -0.470 |
|
|
| KdpE | -0.494 |
|
|
| BluR | -0.509 |
|
|
| AidB | -0.518 |
|
|
| UidR | -0.525 |
|
|
| DinJ-YafQ | -0.554 |
|
|
| XylR | -0.560 |
|
|
| RutR | -0.568 |
|
|
| RtcR | -0.572 |
|
|
| IclR | -0.573 |
|
|
| DsdC | -0.581 |
|
|
| CadC | -0.610 |
|
|
| XapR | -0.622 |
|
|
| RcsB | -0.649 |
|
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| ExuR | -0.649 |
|
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| UhpA | -0.681 |
|
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| YjjQ | -0.708 |
|
|
| DpiA | -0.716 |
|
|
| Zur | -0.719 |
|
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| UlaR | -0.730 |
|
|
| RcdA | -0.742 |
|
|
| NarL | -0.743 |
|
|
| FucR | -0.747 |
|
|
| Dan | -0.750 |
|
|
| PrpR | -0.758 |
|
|
| RclR | -0.769 |
|
|
| Ada | -0.773 |
|
|
| AgaR | -0.776 |
|
|
| NimR | -0.787 |
|
|
| GlcC | -0.790 |
|
|
| YpdB | -0.800 |
|
|
| CaiF | -0.802 |
|
|
| GatR | -0.837 |
|
|
| OxyR | -0.902 |
|
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| McbR | -0.919 |
|
|
| GadE-RcsB | -0.944 |
|
|
| MngR | -0.964 |
|
|
| NsrR | -0.982 |
|
|
| OmpR | -0.995 |
|
|
| PaaX | -1.026 |
|
|
| PhoB | -1.055 |
|
|
| EvgA | -1.114 |
|
|
| UxuR | -1.135 |
|
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| DicA | -1.153 |
|
|
| LsrR | -1.187 |
|
|
| IdnR | -1.201 |
|
|
| NarP | -1.209 |
|
|
| RhaS | -1.219 |
|
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| DcuR | -1.273 |
|
|
| FeaR | -1.274 |
|
|
| CynR | -1.378 |
|
|
| TorR | -1.451 |
|
|
| AllR | -1.590 |
|
|
| ComR | -1.715 |
|
|
| RcsB-BglJ | -1.807 |
|
|
| LexA | -1.829 |
|
|
| NanR | -1.887 |
|
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| YdeO | -2.050 |
|
|
| AraC | -2.075 |
|
|
| Sigma28 | -2.104 |
|
|
| Sigma54 | -2.563 |
|
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| Sigma38 | -2.629 |
|
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| GlpR | -2.725 |
|
|
| Fis | -4.326 |
|
|
| H-NS | -4.839 |
|
|