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GSE67402: E.coli regulatory changes under long-term starvation
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Sample name: 004_hr_rep2
Sorted Z-values for 004_hr_rep2
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| Sigma70 | 4.623 |
|
|
| NtrC | 3.889 |
|
|
| Sigma24 | 3.297 |
|
|
| PurR | 2.989 |
|
|
| Cra | 2.649 |
|
|
| MalT | 2.586 |
|
|
| PuuR | 2.160 |
|
|
| CueR | 2.127 |
|
|
| GadE | 1.917 |
|
|
| CysB | 1.550 |
|
|
| ArgP | 1.383 |
|
|
| RstA | 1.353 |
|
|
| HypT | 1.305 |
|
|
| FNR | 1.285 |
|
|
| SoxS | 1.268 |
|
|
| CusR | 1.245 |
|
|
| YedW | 1.245 |
|
|
| HdfR | 1.226 |
|
|
| MlrA | 1.164 |
|
|
| CytR | 1.069 |
|
|
| AsnC | 1.051 |
|
|
| PdhR | 0.956 |
|
|
| CspA | 0.956 |
|
|
| MetJ | 0.923 |
|
|
| Nac | 0.922 |
|
|
| ZntR | 0.867 |
|
|
| TyrR | 0.806 |
|
|
| FadR | 0.789 |
|
|
| EnvY | 0.771 |
|
|
| MprA | 0.704 |
|
|
| AlaS | 0.676 |
|
|
| PspF | 0.671 |
|
|
| IlvY | 0.651 |
|
|
| AccB | 0.650 |
|
|
| Sigma32 | 0.623 |
|
|
| MazE-MazF | 0.579 |
|
|
| MazE | 0.579 |
|
|
| ModE | 0.538 |
|
|
| QseB | 0.520 |
|
|
| Sigma19 | 0.518 |
|
|
| LrhA | 0.516 |
|
|
| ArcA | 0.506 |
|
|
| Rob | 0.487 |
|
|
| PepA | 0.476 |
|
|
| YqjI | 0.410 |
|
|
| DnaA | 0.402 |
|
|
| MraZ | 0.365 |
|
|
| FabR | 0.351 |
|
|
| AppY | 0.341 |
|
|
| HU | 0.331 |
|
|
| DhaR | 0.324 |
|
|
| AdiY | 0.309 |
|
|
| EnvR | 0.309 |
|
|
| GcvA | 0.291 |
|
|
| Mlc | 0.287 |
|
|
| YehT | 0.228 |
|
|
| BetI | 0.222 |
|
|
| LldR | 0.218 |
|
|
| AlsR | 0.178 |
|
|
| SdiA | 0.164 |
|
|
| RbsR | 0.163 |
|
|
| BluR | 0.152 |
|
|
| FlhDC | 0.140 |
|
|
| RtcR | 0.109 |
|
|
| UvrY | 0.085 |
|
|
| LeuO | 0.080 |
|
|
| KdgR | 0.080 |
|
|
| GutM | 0.077 |
|
|
| FhlA | 0.058 |
|
|
| ChbR | 0.050 |
|
|
| HyfR | 0.027 |
|
|
| BasR | 0.027 |
|
|
| RcsB | -0.010 |
|
|
| BirA | -0.020 |
|
|
| CpxR | -0.038 |
|
|
| CsiR | -0.054 |
|
|
| Cbl | -0.062 |
|
|
| CecR | -0.076 |
|
|
| GalS | -0.077 |
|
|
| GalR | -0.077 |
|
|
| NadR | -0.080 |
|
|
| NikR | -0.095 |
|
|
| RhaR | -0.106 |
|
|
| HipAB | -0.108 |
|
|
| PgrR | -0.108 |
|
|
| CreB | -0.109 |
|
|
| DeoR | -0.125 |
|
|
| IscR | -0.140 |
|
|
| MetR | -0.150 |
|
|
| AcrR | -0.154 |
|
|
| TdcA | -0.154 |
|
|
| PutA | -0.159 |
|
|
| ArsR | -0.169 |
|
|
| MhpR | -0.176 |
|
|
| DpiA | -0.177 |
|
|
| NarL | -0.179 |
|
|
| NrdR | -0.191 |
|
|
| Fur | -0.203 |
|
|
| RutR | -0.205 |
|
|
| YiaJ | -0.210 |
|
|
| UlaR | -0.217 |
|
|
| NhaR | -0.219 |
|
|
| SlyA | -0.223 |
|
|
| NemR | -0.226 |
|
|
| Lrp | -0.227 |
|
|
| GadW | -0.245 |
|
|
| FliZ | -0.252 |
|
|
| PhoP | -0.256 |
|
|
| MarA | -0.256 |
|
|
| AtoC | -0.259 |
|
|
| Ada | -0.262 |
|
|
| LacI | -0.263 |
|
|
| GlcC | -0.272 |
|
|
| MtlR | -0.276 |
|
|
| MarR | -0.282 |
|
|
| SutR | -0.290 |
|
|
| UidR | -0.295 |
|
|
| MalI | -0.303 |
|
|
| MurR | -0.316 |
|
|
| GlrR | -0.317 |
|
|
| ArgR | -0.318 |
|
|
| RcdA | -0.323 |
|
|
| AscG | -0.343 |
|
|
| HcaR | -0.345 |
|
|
| UhpA | -0.346 |
|
|
| KdpE | -0.357 |
|
|
| AllS | -0.366 |
|
|
| ZraR | -0.369 |
|
|
| LysR | -0.373 |
|
|
| YqhC | -0.377 |
|
|
| GntR | -0.387 |
|
|
| SgrR | -0.390 |
|
|
| HipB | -0.399 |
|
|
| MelR | -0.410 |
|
|
| NagC | -0.412 |
|
|
| GatR | -0.466 |
|
|
| RelB | -0.474 |
|
|
| LsrR | -0.487 |
|
|
| OxyR | -0.490 |
|
|
| CaiF | -0.490 |
|
|
| Zur | -0.492 |
|
|
| MatA | -0.495 |
|
|
| GadX | -0.505 |
|
|
| AidB | -0.510 |
|
|
| YeiL | -0.513 |
|
|
| EbgR | -0.520 |
|
|
| NorR | -0.523 |
|
|
| McbR | -0.523 |
|
|
| NimR | -0.524 |
|
|
| OmpR | -0.529 |
|
|
| BaeR | -0.541 |
|
|
| ComR | -0.544 |
|
|
| FucR | -0.545 |
|
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| TreR | -0.550 |
|
|
| XapR | -0.560 |
|
|
| SoxR | -0.561 |
|
|
| DinJ-YafQ | -0.567 |
|
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| IclR | -0.568 |
|
|
| RclR | -0.586 |
|
|
| TrpR | -0.594 |
|
|
| YpdB | -0.611 |
|
|
| FeaR | -0.615 |
|
|
| StpA | -0.618 |
|
|
| CsgD | -0.619 |
|
|
| GadE-RcsB | -0.653 |
|
|
| TorR | -0.682 |
|
|
| MngR | -0.715 |
|
|
| CynR | -0.728 |
|
|
| CadC | -0.731 |
|
|
| AgaR | -0.731 |
|
|
| BolA | -0.738 |
|
|
| PrpR | -0.748 |
|
|
| Dan | -0.762 |
|
|
| DicA | -0.773 |
|
|
| PaaX | -0.805 |
|
|
| RcsAB | -0.837 |
|
|
| CdaR | -0.840 |
|
|
| XylR | -0.858 |
|
|
| ExuR | -0.865 |
|
|
| UxuR | -0.881 |
|
|
| YjjQ | -0.949 |
|
|
| NsrR | -0.964 |
|
|
| IHF | -0.993 |
|
|
| EvgA | -1.015 |
|
|
| MqsA | -1.098 |
|
|
| IdnR | -1.126 |
|
|
| MntR | -1.148 |
|
|
| DsdC | -1.204 |
|
|
| RhaS | -1.211 |
|
|
| RcsB-BglJ | -1.233 |
|
|
| AllR | -1.278 |
|
|
| DcuR | -1.323 |
|
|
| LexA | -1.397 |
|
|
| CRP | -1.435 |
|
|
| YdeO | -1.463 |
|
|
| NarP | -1.465 |
|
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| Sigma28 | -1.590 |
|
|
| Sigma54 | -1.889 |
|
|
| NanR | -1.915 |
|
|
| PhoB | -2.135 |
|
|
| AraC | -2.322 |
|
|
| GlpR | -2.697 |
|
|
| Sigma38 | -2.995 |
|
|
| Fis | -3.122 |
|
|
| H-NS | -4.041 |
|
|