GSE67402: E.coli regulatory changes under long-term starvation
WM name | Z-value | Associated genes | Logo |
---|---|---|---|
Sigma38 | 4.413 |
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H-NS | 2.635 |
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Sigma54 | 2.310 |
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Fis | 1.769 |
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IHF | 1.715 |
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PhoB | 1.651 |
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NagC | 1.482 |
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AraC | 1.446 |
|
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MntR | 1.443 |
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LexA | 1.389 |
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OmpR | 1.361 |
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RcsB-BglJ | 1.347 |
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McbR | 1.311 |
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GadX | 1.169 |
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RcdA | 1.147 |
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YdeO | 1.109 |
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CdaR | 1.100 |
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DcuR | 1.100 |
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TorR | 1.006 |
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RcsB | 0.971 |
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GntR | 0.902 |
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LeuO | 0.867 |
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MtlR | 0.845 |
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CsgD | 0.829 |
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RelB | 0.813 |
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Sigma28 | 0.811 |
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PaaX | 0.793 |
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DinJ-YafQ | 0.772 |
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RhaS | 0.756 |
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GlrR | 0.738 |
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GadW | 0.734 |
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GlpR | 0.726 |
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AllR | 0.708 |
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EvgA | 0.689 |
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CynR | 0.688 |
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MqsA | 0.669 |
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EbgR | 0.666 |
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FeaR | 0.651 |
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PrpR | 0.633 |
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BolA | 0.616 |
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NimR | 0.613 |
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GadE-RcsB | 0.608 |
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DsdC | 0.589 |
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DicA | 0.588 |
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AidB | 0.557 |
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XylR | 0.544 |
|
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IdnR | 0.534 |
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MngR | 0.520 |
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UvrY | 0.512 |
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XapR | 0.511 |
|
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GatR | 0.505 |
|
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KdpE | 0.503 |
|
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BasR | 0.501 |
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Dan | 0.500 |
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ExuR | 0.485 |
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StpA | 0.483 |
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LsrR | 0.477 |
|
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ComR | 0.475 |
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TreR | 0.468 |
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CadC | 0.459 |
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NarL | 0.454 |
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UhpA | 0.443 |
|
|
YjjQ | 0.431 |
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RclR | 0.417 |
|
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Ada | 0.393 |
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NsrR | 0.391 |
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NanR | 0.372 |
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LldR | 0.366 |
|
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AtoC | 0.351 |
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FabR | 0.338 |
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LacI | 0.333 |
|
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SlyA | 0.324 |
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SoxR | 0.324 |
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YpdB | 0.323 |
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CaiF | 0.307 |
|
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IscR | 0.276 |
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YqjI | 0.275 |
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MelR | 0.267 |
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PgrR | 0.260 |
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RcsAB | 0.244 |
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DpiA | 0.242 |
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CytR | 0.217 |
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HcaR | 0.207 |
|
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MurR | 0.196 |
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NarP | 0.187 |
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Cbl | 0.154 |
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MraZ | 0.150 |
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GalS | 0.143 |
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GalR | 0.143 |
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YeiL | 0.140 |
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LysR | 0.132 |
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SgrR | 0.128 |
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Rob | 0.124 |
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ArsR | 0.119 |
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NorR | 0.116 |
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NhaR | 0.110 |
|
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BetI | 0.105 |
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Mlc | 0.103 |
|
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BluR | 0.101 |
|
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UxuR | 0.085 |
|
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FhlA | 0.081 |
|
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MatA | 0.059 |
|
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ChbR | 0.049 |
|
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RhaR | 0.043 |
|
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MhpR | 0.035 |
|
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Lrp | 0.031 |
|
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TdcA | 0.028 |
|
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AllS | 0.019 |
|
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YiaJ | 0.009 |
|
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NrdR | 0.008 |
|
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YqhC | 0.003 |
|
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FucR | 0.002 |
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HipAB | -0.001 |
|
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NikR | -0.027 |
|
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PutA | -0.029 |
|
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HipB | -0.034 |
|
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MarR | -0.059 |
|
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AgaR | -0.074 |
|
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PspF | -0.080 |
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GlcC | -0.091 |
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OxyR | -0.092 |
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MalI | -0.094 |
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CsiR | -0.095 |
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BirA | -0.098 |
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SutR | -0.130 |
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CreB | -0.160 |
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SoxS | -0.161 |
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IclR | -0.162 |
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DeoR | -0.167 |
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CecR | -0.174 |
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RtcR | -0.191 |
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UidR | -0.197 |
|
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UlaR | -0.208 |
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ZraR | -0.209 |
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LrhA | -0.220 |
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AscG | -0.227 |
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BaeR | -0.246 |
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EnvR | -0.252 |
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NemR | -0.256 |
|
|
HyfR | -0.315 |
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KdgR | -0.319 |
|
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RutR | -0.321 |
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PhoP | -0.342 |
|
|
Sigma19 | -0.382 |
|
|
CpxR | -0.382 |
|
|
NadR | -0.388 |
|
|
ZntR | -0.390 |
|
|
DhaR | -0.429 |
|
|
QseB | -0.449 |
|
|
AccB | -0.478 |
|
|
SdiA | -0.510 |
|
|
AppY | -0.547 |
|
|
GutM | -0.568 |
|
|
AlsR | -0.598 |
|
|
YehT | -0.600 |
|
|
GcvA | -0.618 |
|
|
HU | -0.619 |
|
|
AlaS | -0.645 |
|
|
MetJ | -0.695 |
|
|
RstA | -0.698 |
|
|
Nac | -0.735 |
|
|
CRP | -0.740 |
|
|
FadR | -0.741 |
|
|
EnvY | -0.754 |
|
|
FliZ | -0.763 |
|
|
AdiY | -0.792 |
|
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PepA | -0.794 |
|
|
Sigma32 | -0.812 |
|
|
ModE | -0.836 |
|
|
AcrR | -0.853 |
|
|
CspA | -0.879 |
|
|
IlvY | -0.879 |
|
|
CueR | -0.881 |
|
|
RbsR | -0.887 |
|
|
MazE-MazF | -0.887 |
|
|
MazE | -0.887 |
|
|
AsnC | -0.899 |
|
|
TyrR | -0.904 |
|
|
DnaA | -0.915 |
|
|
ArgP | -0.923 |
|
|
MprA | -0.968 |
|
|
CusR | -0.981 |
|
|
YedW | -0.981 |
|
|
MarA | -1.008 |
|
|
MetR | -1.045 |
|
|
Zur | -1.051 |
|
|
ArgR | -1.093 |
|
|
Fur | -1.102 |
|
|
HdfR | -1.148 |
|
|
FlhDC | -1.150 |
|
|
PuuR | -1.205 |
|
|
FNR | -1.216 |
|
|
PdhR | -1.299 |
|
|
GadE | -1.396 |
|
|
MlrA | -1.492 |
|
|
HypT | -1.589 |
|
|
Cra | -1.679 |
|
|
ArcA | -1.748 |
|
|
TrpR | -1.779 |
|
|
Sigma24 | -2.272 |
|
|
PurR | -2.492 |
|
|
MalT | -2.589 |
|
|
CysB | -2.749 |
|
|
NtrC | -2.893 |
|
|
Sigma70 | -3.141 |
|