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GSE67402: E.coli regulatory changes under long-term starvation
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Sample name: 048_hr_rep2
Sorted Z-values for 048_hr_rep2
| WM name | Z-value | Associated genes | Logo |
|---|---|---|---|
| H-NS | 4.425 |
|
|
| Fis | 3.290 |
|
|
| Sigma54 | 2.908 |
|
|
| Sigma28 | 2.329 |
|
|
| AraC | 2.275 |
|
|
| RcsB-BglJ | 2.242 |
|
|
| PhoB | 1.852 |
|
|
| Sigma38 | 1.512 |
|
|
| EvgA | 1.501 |
|
|
| TorR | 1.491 |
|
|
| YdeO | 1.467 |
|
|
| GlpR | 1.453 |
|
|
| NarP | 1.389 |
|
|
| RhaS | 1.332 |
|
|
| RcsB | 1.299 |
|
|
| PaaX | 1.278 |
|
|
| RcsAB | 1.272 |
|
|
| CynR | 1.248 |
|
|
| DsdC | 1.211 |
|
|
| IdnR | 1.175 |
|
|
| StpA | 1.118 |
|
|
| DicA | 1.097 |
|
|
| AllR | 1.071 |
|
|
| FeaR | 1.044 |
|
|
| McbR | 1.029 |
|
|
| DcuR | 1.009 |
|
|
| LexA | 1.008 |
|
|
| Dan | 0.989 |
|
|
| GadE-RcsB | 0.966 |
|
|
| CdaR | 0.956 |
|
|
| LsrR | 0.950 |
|
|
| NanR | 0.911 |
|
|
| AgaR | 0.900 |
|
|
| GntR | 0.896 |
|
|
| MurR | 0.852 |
|
|
| CaiF | 0.841 |
|
|
| MngR | 0.782 |
|
|
| NimR | 0.778 |
|
|
| ExuR | 0.748 |
|
|
| ArgR | 0.736 |
|
|
| RutR | 0.731 |
|
|
| PrpR | 0.729 |
|
|
| CadC | 0.717 |
|
|
| UlaR | 0.701 |
|
|
| XapR | 0.690 |
|
|
| PspF | 0.689 |
|
|
| RcdA | 0.689 |
|
|
| GatR | 0.688 |
|
|
| YiaJ | 0.656 |
|
|
| OmpR | 0.646 |
|
|
| MelR | 0.641 |
|
|
| NarL | 0.641 |
|
|
| UhpA | 0.630 |
|
|
| RclR | 0.628 |
|
|
| EbgR | 0.618 |
|
|
| BolA | 0.604 |
|
|
| TreR | 0.600 |
|
|
| ComR | 0.595 |
|
|
| SoxR | 0.543 |
|
|
| LysR | 0.536 |
|
|
| YpdB | 0.526 |
|
|
| Ada | 0.524 |
|
|
| UxuR | 0.523 |
|
|
| GlrR | 0.513 |
|
|
| MalI | 0.505 |
|
|
| YeiL | 0.499 |
|
|
| AidB | 0.492 |
|
|
| FucR | 0.488 |
|
|
| LacI | 0.482 |
|
|
| GadX | 0.481 |
|
|
| KdpE | 0.477 |
|
|
| DpiA | 0.458 |
|
|
| YjjQ | 0.445 |
|
|
| ZraR | 0.400 |
|
|
| PgrR | 0.397 |
|
|
| GadW | 0.391 |
|
|
| ArsR | 0.365 |
|
|
| NsrR | 0.357 |
|
|
| MhpR | 0.336 |
|
|
| SlyA | 0.331 |
|
|
| GlcC | 0.320 |
|
|
| AllS | 0.308 |
|
|
| MatA | 0.293 |
|
|
| TdcA | 0.281 |
|
|
| BasR | 0.269 |
|
|
| DinJ-YafQ | 0.268 |
|
|
| AppY | 0.266 |
|
|
| NorR | 0.235 |
|
|
| NagC | 0.227 |
|
|
| MarR | 0.225 |
|
|
| BirA | 0.224 |
|
|
| RhaR | 0.220 |
|
|
| AscG | 0.208 |
|
|
| CytR | 0.203 |
|
|
| IclR | 0.182 |
|
|
| XylR | 0.179 |
|
|
| CsgD | 0.171 |
|
|
| YqjI | 0.161 |
|
|
| UvrY | 0.159 |
|
|
| RtcR | 0.156 |
|
|
| FhlA | 0.149 |
|
|
| BluR | 0.142 |
|
|
| HcaR | 0.139 |
|
|
| Cbl | 0.122 |
|
|
| MqsA | 0.120 |
|
|
| MetR | 0.093 |
|
|
| AtoC | 0.088 |
|
|
| HipB | 0.087 |
|
|
| UidR | 0.076 |
|
|
| MntR | 0.072 |
|
|
| BetI | 0.071 |
|
|
| SdiA | 0.067 |
|
|
| HyfR | 0.050 |
|
|
| HU | 0.027 |
|
|
| PutA | 0.016 |
|
|
| AlsR | 0.003 |
|
|
| GalS | -0.004 |
|
|
| GalR | -0.004 |
|
|
| YqhC | -0.005 |
|
|
| NikR | -0.006 |
|
|
| LldR | -0.019 |
|
|
| HipAB | -0.023 |
|
|
| MtlR | -0.024 |
|
|
| Zur | -0.028 |
|
|
| Rob | -0.033 |
|
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| BaeR | -0.040 |
|
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| CpxR | -0.042 |
|
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| NrdR | -0.042 |
|
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| OxyR | -0.052 |
|
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| CsiR | -0.067 |
|
|
| RelB | -0.075 |
|
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| SutR | -0.085 |
|
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| AcrR | -0.093 |
|
|
| MarA | -0.097 |
|
|
| ChbR | -0.109 |
|
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| CreB | -0.117 |
|
|
| CecR | -0.146 |
|
|
| LeuO | -0.160 |
|
|
| ZntR | -0.161 |
|
|
| Nac | -0.167 |
|
|
| FliZ | -0.167 |
|
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| NemR | -0.171 |
|
|
| MraZ | -0.186 |
|
|
| NadR | -0.195 |
|
|
| NhaR | -0.208 |
|
|
| LrhA | -0.222 |
|
|
| Mlc | -0.228 |
|
|
| DeoR | -0.237 |
|
|
| EnvR | -0.238 |
|
|
| IHF | -0.243 |
|
|
| GutM | -0.253 |
|
|
| GcvA | -0.279 |
|
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| AdiY | -0.292 |
|
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| Lrp | -0.324 |
|
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| DhaR | -0.355 |
|
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| KdgR | -0.368 |
|
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| FabR | -0.370 |
|
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| IscR | -0.385 |
|
|
| QseB | -0.387 |
|
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| PhoP | -0.467 |
|
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| IlvY | -0.484 |
|
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| Sigma19 | -0.488 |
|
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| EnvY | -0.497 |
|
|
| YehT | -0.503 |
|
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| SgrR | -0.532 |
|
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| RstA | -0.533 |
|
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| AccB | -0.539 |
|
|
| AsnC | -0.565 |
|
|
| PepA | -0.576 |
|
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| RbsR | -0.657 |
|
|
| DnaA | -0.669 |
|
|
| MprA | -0.688 |
|
|
| MazE-MazF | -0.707 |
|
|
| MazE | -0.707 |
|
|
| CueR | -0.720 |
|
|
| FNR | -0.727 |
|
|
| CusR | -0.727 |
|
|
| YedW | -0.727 |
|
|
| AlaS | -0.759 |
|
|
| ModE | -0.808 |
|
|
| MlrA | -0.864 |
|
|
| ArgP | -0.932 |
|
|
| Fur | -0.962 |
|
|
| FlhDC | -1.015 |
|
|
| PuuR | -1.062 |
|
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| TyrR | -1.068 |
|
|
| CspA | -1.179 |
|
|
| HdfR | -1.190 |
|
|
| CysB | -1.203 |
|
|
| CRP | -1.363 |
|
|
| MetJ | -1.365 |
|
|
| GadE | -1.373 |
|
|
| TrpR | -1.406 |
|
|
| ArcA | -1.560 |
|
|
| SoxS | -1.568 |
|
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| HypT | -1.599 |
|
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| PdhR | -1.746 |
|
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| FadR | -1.998 |
|
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| PurR | -2.034 |
|
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| Sigma32 | -2.052 |
|
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| MalT | -2.725 |
|
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| NtrC | -3.227 |
|
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| Sigma24 | -3.272 |
|
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| Cra | -3.448 |
|
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| Sigma70 | -5.048 |
|
|