ISMARA results: AdrenalCortex

Sample name: AdrenalCortex

Sorted Z-values histogram for the sample AdrenalCortex

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
CUCCCAA	11.547
RREB1.p2	5.781	RREB1
TLX1..3_NFIC{dimer}.p2	5.626	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
RXR{A,B,G}.p2	5.205	RXRA RXRB RXRG
GATA6.p2	5.039	GATA6
TEAD1.p2	5.031	TEAD1 TEAD2 TEAD3 TEAD4
TBP.p2	4.977	TBP
TFAP4.p2	4.581	TFAP4
MYOD1.p2	4.195	MYOD1
TGIF1.p2	3.864	TGIF1
SRF.p3	3.860	SRF
MTF1.p2	3.737	MTF1
HMX1.p2	3.543	HMX1
EN1,2.p2	3.464	EN1 EN2
POU1F1.p2	3.454	POU1F1
HOX{A5,B5}.p2	3.409	HOXB5 HOXA5
EVI1.p2	3.360	EVI1
TFEB.p2	3.301	TFEB
UUUUUGC	3.226
TBX4,5.p2	3.074	TBX5 TBX4
HIC1.p2	3.071	HIC1
MYFfamily.p2	3.067	MYOD1 MYF6 MYF5 MYOG
STAT2,4,6.p2	3.023	STAT2 STAT4 STAT6
CAGCAGG	2.969
ZIC1..3.p2	2.942	ZIC1 ZIC2 ZIC3
TFCP2.p2	2.916	TFCP2
LEF1_TCF7_TCF7L1,2.p2	2.903	TCF7 TCF7L2 LEF1 TCF7L1
CCCUGAG	2.811
UCCCUUU	2.787
RXRA_VDR{dimer}.p2	2.753	VDR	$logo of RXRA_VDR{dimer}.p2$
GGCAGUG	2.733
ZNF423.p2	2.633	ZNF423
KLF12.p2	2.605	KLF12
SMAD1..7,9.p2	2.560	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
ATF6.p2	2.548	ATF6
HNF4A_NR2F1,2.p2	2.415	NR2F1 NR2F2 HNF4A
GATA1..3.p2	2.397	GATA1 GATA2 GATA3
CACAGUG	2.340
NFE2L1.p2	2.335	NFE2L1
NR3C1.p2	2.329	NR3C1
CGUGUCU	2.322
REST.p3	2.273	REST
UAUUGCU	2.271
ALX1.p2	2.245	ALX1
AUGGCUU	2.221
HNF1A.p2	2.202	HNF1A
GGCUCAG	2.197
JUN.p2	2.164	JUN JUND JUNB
NANOG{mouse}.p2	2.127	NANOG
GTF2A1,2.p2	2.108	GTF2A1 GTF2A2
HBP1_HMGB_SSRP1_UBTF.p2	2.047	HMGB2 HMGB3 SSRP1 UBTF HBP1
GAGGUAG	2.006
RFX1..5_RFXANK_RFXAP.p2	1.994	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
RORA.p2	1.894	RORA
NR6A1.p2	1.863	NR6A1
LHX3,4.p2	1.850	LHX3 LHX4
STAT1,3.p3	1.826	STAT1 STAT3
MAZ.p2	1.821	MAZ
TLX2.p2	1.771	TLX2
CCAGCAU	1.741
HAND1,2.p2	1.725	HAND1 HAND2
SNAI1..3.p2	1.717	SNAI2 SNAI1 SNAI3
UUGUUCG	1.679
ATF5_CREB3.p2	1.671	ATF5 CREB3
FOXP3.p2	1.669	FOXP3
NKX2-3_NKX2-5.p2	1.664	NKX2-5 NKX2-3
HSF1,2.p2	1.623	HSF1 HSF2
TCF4_dimer.p2	1.619	TCF4
GAUUGUC	1.612
GTF2I.p2	1.548	GTF2I
AAAGUGC	1.484
EBF1.p2	1.479	EBF1
FOXQ1.p2	1.433	FOXQ1
FOS_FOS{B,L1}_JUN{B,D}.p2	1.406	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NKX2-1,4.p2	1.386	NKX2-1 NKX2-4
POU6F1.p2	1.370	POU6F1
ZNF384.p2	1.319	ZNF384
AAUCUCU	1.304
UGAAAUG	1.295
POU3F1..4.p2	1.240	POU3F1 POU3F3 POU3F2 POU3F4
DBP.p2	1.165	DBP
RBPJ.p2	1.163	RBPJ
AAGUGCU	1.161
HLF.p2	1.149	HLF
NFKB1_REL_RELA.p2	1.104	RELA REL NFKB1
IKZF1.p2	1.053	IKZF1
NFATC1..3.p2	1.052	NFATC3 NFATC2 NFATC1
TFAP2{A,C}.p2	1.048	TFAP2C TFAP2A
FOXA2.p3	0.983	FOXA2
NR5A1,2.p2	0.926	NR5A1 NR5A2
AGCAGCG	0.893
NR1H4.p2	0.890	NR1H4
ACCCUGU	0.889
CREB1.p2	0.889	CREB1
FOX{D1,D2}.p2	0.881	FOXD2 FOXD1
GFI1B.p2	0.855	GFI1B
STAT5{A,B}.p2	0.845	STAT5B STAT5A
VSX1,2.p2	0.828	VSX2 VSX1
AAUGCCC	0.822
GZF1.p2	0.813	GZF1
MZF1.p2	0.799	MZF1
GUAGUGU	0.787
TAL1_TCF{3,4,12}.p2	0.785	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GAGAACU	0.768
AAGGCAC	0.750
GGACGGA	0.743
ACAGUAC	0.738
HES1.p2	0.699	HES1
AACACUG	0.688
AAGGUGC	0.676
ZEB1.p2	0.668	ZEB1
PAX3,7.p2	0.661	PAX7 PAX3
GLI1..3.p2	0.640	GLI1 GLI2 GLI3
FOSL2.p2	0.620	FOSL2
AUGUGCC	0.619
AUUGCAC	0.587
SRY.p2	0.561	SRY
HOXA9_MEIS1.p2	0.558	MEIS1 HOXA9
AHR_ARNT_ARNT2.p2	0.529	ARNT AHR ARNT2
EOMES.p2	0.527	EOMES
CUACAGU	0.525
UAAGACU	0.496
POU2F1..3.p2	0.474	POU2F2 POU2F1 POU2F3
AIRE.p2	0.384	AIRE
FOXL1.p2	0.378	FOXL1
FOX{F1,F2,J1}.p2	0.377	FOXF2 FOXJ1 FOXF1
GAGAUGA	0.376
UAAUGCU	0.363
MSX1,2.p2	0.354	MSX1 MSX2
FOX{I1,J2}.p2	0.349	FOXI1 FOXJ2
FOX{C1,C2}.p2	0.337	FOXC1 FOXC2
ETS1,2.p2	0.320	ETS2 ETS1
UGUGCUU	0.312
UGUGCGU	0.271
CGUACCG	0.266
AUGACAC	0.266
POU5F1.p2	0.241	POU5F1
PAX8.p2	0.234	PAX8
AR.p2	0.228	AR
CUUUGGU	0.219
GAUCAGA	0.213
SOX{8,9,10}.p2	0.163	SOX9 SOX8 SOX10
ONECUT1,2.p2	0.162	ONECUT2 ONECUT1
ACAGUAU	0.158
UGCAUUG	0.148
GCUGGUG	0.146
CCUUCAU	0.141
AAUCUCA	0.138
AACGGAA	0.108
ESR1.p2	0.098	ESR1
FEV.p2	0.085	FEV
ACUGGCC	0.065
PAX6.p2	0.056	PAX6
HMGA1,2.p2	0.033	HMGA1 HMGA2
PRDM1.p3	0.031	PRDM1
PITX1..3.p2	0.007	PITX2 PITX3 PITX1
CDC5L.p2	0.005	CDC5L
NKX6-1,2.p2	-0.003	NKX6-1 NKX6-2
POU5F1_SOX2{dimer}.p2	-0.021	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
ACCCGUA	-0.023
GGCAAGA	-0.031
UUGGCAC	-0.044
FOXD3.p2	-0.066	FOXD3
NANOG.p2	-0.076	NANOG
AACCUGG	-0.081
FOXO1,3,4.p2	-0.102	FOXO1 FOXO4 FOXO3
NFIL3.p2	-0.119	NFIL3
GUAAACA	-0.125
EGR1..3.p2	-0.139	EGR3 EGR1 EGR2
MYBL2.p2	-0.145	MYBL2
CTCF.p2	-0.155	CTCF
GCUACAU	-0.246
UGCAUAG	-0.251
HOX{A6,A7,B6,B7}.p2	-0.267	HOXB6 HOXA7 HOXB7 HOXA6
CCAGUGU	-0.273
UGACCUA	-0.301
RXRG_dimer.p3	-0.309	NR1H2 RXRA PPARG PPARA RXRB RXRG
NR4A2.p2	-0.349	NR4A2
PDX1.p2	-0.351	PDX1
UCACAGU	-0.364
AAUACUG	-0.403
AACCGUU	-0.405
GAUAUGU	-0.439
IKZF2.p2	-0.439	IKZF2
HOX{A4,D4}.p2	-0.481	HOXA4 HOXD4
UUGGCAA	-0.484
AGCUUAU	-0.559
RUNX1..3.p2	-0.587	RUNX1 RUNX3 RUNX2
BPTF.p2	-0.612	BPTF
ZNF238.p2	-0.633	ZNF238
NKX3-1.p2	-0.656	NKX3-1
AGCAGCA	-0.660
ACUGCAU	-0.688
TFAP2B.p2	-0.709	TFAP2B
AGCACCA	-0.712
UCAAGUA	-0.726
AGUGCAA	-0.731
ACAUUCA	-0.736
ZBTB6.p2	-0.750	ZBTB6
FOXN1.p2	-0.757	FOXN1
CRX.p2	-0.762	CRX
AGCUGCC	-0.793
UUGGUCC	-0.824
GGAGUGU	-0.831
SOX5.p2	-0.899	SOX5
SPZ1.p2	-0.905	SPZ1
CEBPA,B_DDIT3.p2	-0.920	DDIT3 CEBPA CEBPB
PATZ1.p2	-0.951	PATZ1
PRRX1,2.p2	-0.957	PRRX2 PRRX1
ZBTB16.p2	-1.021	ZBTB16
NFIX.p2	-1.118	NFIX
SP1.p2	-1.123	SP1
PPARG.p2	-1.151	PPARG
MEF2{A,B,C,D}.p2	-1.168	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GUAACAG	-1.190
bHLH_family.p2	-1.213	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ATF2.p2	-1.216	ATF2
ADNP_IRX_SIX_ZHX.p2	-1.222	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CAGUGCA	-1.228
GGAAGAC	-1.229
EWSR1-FLI1.p2	-1.266	FLI1 EWSR1
GUGCAAA	-1.364
IRF1,2,7.p3	-1.406	IRF1 IRF2 IRF7
CDX1,2,4.p2	-1.437	CDX1 CDX2 CDX4
NFE2.p2	-1.451	NFE2
AGGUAGU	-1.470
CUX2.p2	-1.476	CUX2
UAAGACG	-1.525
PAX2.p2	-1.528	PAX2
GUCAGUU	-1.541
AACAGUC	-1.570
UCCAGUU	-1.585
TP53.p2	-1.617	TP53
ARID5B.p2	-1.645	ARID5B
GFI1.p2	-1.679	GFI1
T.p2	-1.698	T
SOX17.p2	-1.883	SOX17
SREBF1,2.p2	-1.904	SREBF1 SREBF2
ATF4.p2	-1.914	ATF4
NFE2L2.p2	-1.954	NFE2L2
AUGGCAC	-1.999
NHLH1,2.p2	-2.072	NHLH1 NHLH2
DMAP1_NCOR{1,2}_SMARC.p2	-2.172	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AGUGGUU	-2.203
LMO2.p2	-2.337	LMO2
PAX4.p2	-2.367	PAX4
NKX2-2,8.p2	-2.422	NKX2-2 NKX2-8
EP300.p2	-2.434	EP300
XBP1.p3	-2.526	XBP1
ZNF148.p2	-2.527	ZNF148
NKX3-2.p2	-2.541	NKX3-2
UCACAUU	-2.663
GCAGCAU	-2.683
PBX1.p2	-2.713	PBX1
SPIB.p2	-2.841	SPIB
KLF4.p3	-2.877	KLF4
ZFP161.p2	-3.040	ZFP161
PAX5.p2	-3.208	PAX5
ESRRA.p2	-3.217	ESRRA
SPI1.p2	-3.377	SPI1
MAFB.p2	-3.431	MAFB
BACH2.p2	-3.447	BACH2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.080	ARNT MAX MYC USF1 BHLHB2 ARNT2
SOX2.p2	-4.113	SOX2
EHF.p2	-4.179	EHF
GGAAUGU	-4.666
ELF1,2,4.p2	-4.670	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	-5.049	NFYC NFYB NFYA
HIF1A.p2	-5.097	HIF1A
NRF1.p2	-6.836	NRF1
ZNF143.p2	-7.060	ZNF143
TFDP1.p2	-7.147	TFDP1
ELK1,4_GABP{A,B1}.p3	-7.483	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
E2F1..5.p2	-7.679	E2F4 E2F5 E2F2 E2F1 E2F3
MYB.p2	-8.380	MYB
YY1.p2	-13.248	YY1

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Sample name: AdrenalCortex

Sorted z-values for every WM.