ISMARA results: Amygdala

Sample name: Amygdala

Sorted Z-values histogram for the sample Amygdala

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	9.950	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	9.297	REST
HIC1.p2	8.059	HIC1
MAFB.p2	7.947	MAFB
HOX{A6,A7,B6,B7}.p2	7.073	HOXB6 HOXA7 HOXB7 HOXA6
EGR1..3.p2	6.703	EGR3 EGR1 EGR2
ATF2.p2	6.384	ATF2
UGUGCUU	6.206
ZFP161.p2	6.027	ZFP161
MYOD1.p2	5.954	MYOD1
SOX2.p2	5.799	SOX2
NHLH1,2.p2	5.674	NHLH1 NHLH2
KLF12.p2	5.502	KLF12
AAUACUG	5.186
GGCAGUG	5.083
GATA1..3.p2	5.051	GATA1 GATA2 GATA3
TGIF1.p2	5.006	TGIF1
MZF1.p2	4.669	MZF1
MTF1.p2	4.394	MTF1
GTF2I.p2	4.355	GTF2I
ZBTB6.p2	4.289	ZBTB6
ZIC1..3.p2	4.276	ZIC1 ZIC2 ZIC3
DBP.p2	4.211	DBP
FOX{I1,J2}.p2	4.077	FOXI1 FOXJ2
TCF4_dimer.p2	4.010	TCF4
UUGGUCC	3.951
ACAUUCA	3.893
GUGCAAA	3.774
IKZF2.p2	3.716	IKZF2
SRY.p2	3.661	SRY
AGUGCAA	3.639
RREB1.p2	3.567	RREB1
MEF2{A,B,C,D}.p2	3.519	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
JUN.p2	3.415	JUN JUND JUNB
GUAAACA	3.380
GUCAGUU	3.355
NFIX.p2	3.345	NFIX
TAL1_TCF{3,4,12}.p2	3.257	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UGCAUAG	3.238
ESRRA.p2	3.188	ESRRA
PAX2.p2	3.066	PAX2
UAAGACG	2.993
TFEB.p2	2.967	TFEB
SPZ1.p2	2.962	SPZ1
TFAP2B.p2	2.923	TFAP2B
CTCF.p2	2.862	CTCF
STAT2,4,6.p2	2.845	STAT2 STAT4 STAT6
HSF1,2.p2	2.715	HSF1 HSF2
EWSR1-FLI1.p2	2.710	FLI1 EWSR1
UUGGCAC	2.708
LMO2.p2	2.657	LMO2
POU5F1.p2	2.602	POU5F1
ALX1.p2	2.599	ALX1
SMAD1..7,9.p2	2.584	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
AUGGCUU	2.551
SOX{8,9,10}.p2	2.539	SOX9 SOX8 SOX10
EVI1.p2	2.305	EVI1
AUUGCAC	2.181
AGCAGCA	2.095
PAX4.p2	2.068	PAX4
TFCP2.p2	2.064	TFCP2
CEBPA,B_DDIT3.p2	2.062	DDIT3 CEBPA CEBPB
HOX{A5,B5}.p2	2.018	HOXB5 HOXA5
AAGUGCU	2.015
GFI1.p2	1.995	GFI1
HMGA1,2.p2	1.982	HMGA1 HMGA2
NR5A1,2.p2	1.919	NR5A1 NR5A2
GCUACAU	1.887
MAZ.p2	1.878	MAZ
ATF5_CREB3.p2	1.860	ATF5 CREB3
GGAAUGU	1.844
CAGCAGG	1.809
SP1.p2	1.767	SP1
GAUCAGA	1.759
PRRX1,2.p2	1.727	PRRX2 PRRX1
POU5F1_SOX2{dimer}.p2	1.618	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
AUGGCAC	1.604
TBX4,5.p2	1.585	TBX5 TBX4
SREBF1,2.p2	1.527	SREBF1 SREBF2
UCACAGU	1.519
UAAGACU	1.504
CUCCCAA	1.499
NFIL3.p2	1.477	NFIL3
NFE2L1.p2	1.471	NFE2L1
CCAGCAU	1.435
FOXO1,3,4.p2	1.386	FOXO1 FOXO4 FOXO3
EOMES.p2	1.382	EOMES
GGAAGAC	1.372
CDC5L.p2	1.323	CDC5L
EBF1.p2	1.295	EBF1
UAUUGCU	1.293
GGCUCAG	1.232
AAAGUGC	1.222
GCUGGUG	1.221
HAND1,2.p2	1.210	HAND1 HAND2
UGAAAUG	1.209
FOXP3.p2	1.184	FOXP3
NKX3-1.p2	1.155	NKX3-1
GLI1..3.p2	1.137	GLI1 GLI2 GLI3
ZNF423.p2	1.105	ZNF423
HBP1_HMGB_SSRP1_UBTF.p2	1.067	HMGB2 HMGB3 SSRP1 UBTF HBP1
TLX1..3_NFIC{dimer}.p2	1.043	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
AGGUAGU	1.020
ATF4.p2	0.963	ATF4
CAGUGCA	0.959
NKX2-3_NKX2-5.p2	0.945	NKX2-5 NKX2-3
MYFfamily.p2	0.939	MYOD1 MYF6 MYF5 MYOG
NKX3-2.p2	0.921	NKX3-2
AACAGUC	0.898
CDX1,2,4.p2	0.894	CDX1 CDX2 CDX4
NR3C1.p2	0.821	NR3C1
UGUGCGU	0.801
FOX{F1,F2,J1}.p2	0.767	FOXF2 FOXJ1 FOXF1
ACUGCAU	0.754
PAX3,7.p2	0.744	PAX7 PAX3
UCCCUUU	0.724
GGACGGA	0.718
GAGAACU	0.696
STAT5{A,B}.p2	0.690	STAT5B STAT5A
NKX6-1,2.p2	0.679	NKX6-1 NKX6-2
GFI1B.p2	0.596	GFI1B
ACUGGCC	0.564
GZF1.p2	0.561	GZF1
ESR1.p2	0.532	ESR1
NR4A2.p2	0.508	NR4A2
CUACAGU	0.505
POU6F1.p2	0.499	POU6F1
AACGGAA	0.480
GGCAAGA	0.431
ZNF384.p2	0.411	ZNF384
NANOG.p2	0.397	NANOG
FOXN1.p2	0.382	FOXN1
AGCAGCG	0.370
SNAI1..3.p2	0.358	SNAI2 SNAI1 SNAI3
AACACUG	0.355
HOXA9_MEIS1.p2	0.280	MEIS1 HOXA9
FOXL1.p2	0.244	FOXL1
AACCGUU	0.234
CUX2.p2	0.221	CUX2
HES1.p2	0.196	HES1
FEV.p2	0.189	FEV
AUGACAC	0.182
RXRA_VDR{dimer}.p2	0.182	VDR	$logo of RXRA_VDR{dimer}.p2$
AAUCUCU	0.179
GAUAUGU	0.173
PAX8.p2	0.134	PAX8
AIRE.p2	0.132	AIRE
ZEB1.p2	0.117	ZEB1
PAX6.p2	0.110	PAX6
CRX.p2	0.110	CRX
HOX{A4,D4}.p2	0.100	HOXA4 HOXD4
HIF1A.p2	0.086	HIF1A
STAT1,3.p3	0.071	STAT1 STAT3
POU3F1..4.p2	0.051	POU3F1 POU3F3 POU3F2 POU3F4
RORA.p2	-0.025	RORA
UUUUUGC	-0.037
PDX1.p2	-0.041	PDX1
CGUGUCU	-0.058
ACCCGUA	-0.065
LEF1_TCF7_TCF7L1,2.p2	-0.109	TCF7 TCF7L2 LEF1 TCF7L1
AR.p2	-0.110	AR
PBX1.p2	-0.124	PBX1
GGAGUGU	-0.129
UUGGCAA	-0.132
AAUCUCA	-0.199
NKX2-2,8.p2	-0.227	NKX2-2 NKX2-8
GUAGUGU	-0.230
VSX1,2.p2	-0.235	VSX2 VSX1
AACCUGG	-0.240
AAUGCCC	-0.316
GAGAUGA	-0.318
NR6A1.p2	-0.320	NR6A1
NFE2L2.p2	-0.324	NFE2L2
NR1H4.p2	-0.324	NR1H4
NKX2-1,4.p2	-0.370	NKX2-1 NKX2-4
PAX5.p2	-0.443	PAX5
MSX1,2.p2	-0.476	MSX1 MSX2
RXR{A,B,G}.p2	-0.552	RXRA RXRB RXRG
ETS1,2.p2	-0.555	ETS2 ETS1
FOSL2.p2	-0.573	FOSL2
UGCAUUG	-0.576
ACAGUAC	-0.606
NFATC1..3.p2	-0.613	NFATC3 NFATC2 NFATC1
POU1F1.p2	-0.624	POU1F1
LHX3,4.p2	-0.672	LHX3 LHX4
NFE2.p2	-0.673	NFE2
GTF2A1,2.p2	-0.684	GTF2A1 GTF2A2
NANOG{mouse}.p2	-0.692	NANOG
ARID5B.p2	-0.703	ARID5B
ACCCUGU	-0.712
FOX{C1,C2}.p2	-0.727	FOXC1 FOXC2
CGUACCG	-0.797
AAGGUGC	-0.803
NRF1.p2	-0.823	NRF1
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.823	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
UGACCUA	-0.825
IKZF1.p2	-0.888	IKZF1
ZNF148.p2	-0.905	ZNF148
CCUUCAU	-1.005
GUAACAG	-1.017
TFAP2{A,C}.p2	-1.036	TFAP2C TFAP2A
RUNX1..3.p2	-1.043	RUNX1 RUNX3 RUNX2
MYBL2.p2	-1.044	MYBL2
UUGUUCG	-1.116
PRDM1.p3	-1.120	PRDM1
FOX{D1,D2}.p2	-1.127	FOXD2 FOXD1
CACAGUG	-1.154
AGCUUAU	-1.164
UCACAUU	-1.173
TBP.p2	-1.190	TBP
HNF4A_NR2F1,2.p2	-1.216	NR2F1 NR2F2 HNF4A
UAAUGCU	-1.240
GCAGCAU	-1.257
RXRG_dimer.p3	-1.271	NR1H2 RXRA PPARG PPARA RXRB RXRG
AUGUGCC	-1.305
PATZ1.p2	-1.310	PATZ1
EN1,2.p2	-1.341	EN1 EN2
HMX1.p2	-1.349	HMX1
CCAGUGU	-1.388
PPARG.p2	-1.402	PPARG
T.p2	-1.414	T
BACH2.p2	-1.438	BACH2
BPTF.p2	-1.475	BPTF
FOXA2.p3	-1.620	FOXA2
ATF6.p2	-1.622	ATF6
TP53.p2	-1.641	TP53
AGUGGUU	-1.659
TEAD1.p2	-1.725	TEAD1 TEAD2 TEAD3 TEAD4
SPIB.p2	-1.815	SPIB
GAUUGUC	-1.836
ONECUT1,2.p2	-1.876	ONECUT2 ONECUT1
UCCAGUU	-1.942
AGCUGCC	-2.013
ACAGUAU	-2.069
AHR_ARNT_ARNT2.p2	-2.114	ARNT AHR ARNT2
FOXQ1.p2	-2.121	FOXQ1
DMAP1_NCOR{1,2}_SMARC.p2	-2.127	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
HLF.p2	-2.230	HLF
KLF4.p3	-2.308	KLF4
UCAAGUA	-2.340
ZNF143.p2	-2.352	ZNF143
SOX5.p2	-2.359	SOX5
TLX2.p2	-2.386	TLX2
ZBTB16.p2	-2.632	ZBTB16
ADNP_IRX_SIX_ZHX.p2	-2.672	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
RBPJ.p2	-2.777	RBPJ
ZNF238.p2	-2.827	ZNF238
HNF1A.p2	-2.967	HNF1A
TFAP4.p2	-2.979	TFAP4
GAGGUAG	-3.103
EP300.p2	-3.179	EP300
FOXD3.p2	-3.358	FOXD3
EHF.p2	-3.381	EHF
YY1.p2	-3.397	YY1
GATA6.p2	-3.617	GATA6
SOX17.p2	-4.135	SOX17
AGCACCA	-4.241
CREB1.p2	-4.299	CREB1
SRF.p3	-4.350	SRF
E2F1..5.p2	-4.351	E2F4 E2F5 E2F2 E2F1 E2F3
ELK1,4_GABP{A,B1}.p3	-4.390	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
bHLH_family.p2	-4.592	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
CCCUGAG	-4.654
IRF1,2,7.p3	-4.704	IRF1 IRF2 IRF7
POU2F1..3.p2	-4.893	POU2F2 POU2F1 POU2F3
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.918	ARNT MAX MYC USF1 BHLHB2 ARNT2
CUUUGGU	-5.001
MYB.p2	-5.118	MYB
XBP1.p3	-5.123	XBP1
NFKB1_REL_RELA.p2	-5.273	RELA REL NFKB1
NFY{A,B,C}.p2	-5.747	NFYC NFYB NFYA
AAGGCAC	-5.922
SPI1.p2	-6.538	SPI1
TFDP1.p2	-6.777	TFDP1
PITX1..3.p2	-7.388	PITX2 PITX3 PITX1
ELF1,2,4.p2	-7.585	ELF2 ELF1 ELF4

ISMARA

Project

Navigation

Downloads

Sample name: Amygdala

Sorted z-values for every WM.