ISMARA results: ColorectalAdenocarcinoma

Sample name: ColorectalAdenocarcinoma

Sorted Z-values histogram for the sample ColorectalAdenocarcinoma

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
E2F1..5.p2	6.425	E2F4 E2F5 E2F2 E2F1 E2F3
PITX1..3.p2	6.122	PITX2 PITX3 PITX1
ZEB1.p2	6.100	ZEB1
BACH2.p2	4.747	BACH2
NFY{A,B,C}.p2	4.563	NFYC NFYB NFYA
MTF1.p2	4.539	MTF1
ELF1,2,4.p2	4.434	ELF2 ELF1 ELF4
TP53.p2	4.365	TP53
TBP.p2	4.270	TBP
FOS_FOS{B,L1}_JUN{B,D}.p2	4.204	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
EP300.p2	4.178	EP300
TFDP1.p2	3.957	TFDP1
bHLH_family.p2	3.836	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
AHR_ARNT_ARNT2.p2	3.800	ARNT AHR ARNT2
HOX{A6,A7,B6,B7}.p2	3.567	HOXB6 HOXA7 HOXB7 HOXA6
ATF6.p2	3.531	ATF6
HIC1.p2	3.228	HIC1
TFAP2{A,C}.p2	3.221	TFAP2C TFAP2A
CEBPA,B_DDIT3.p2	3.175	DDIT3 CEBPA CEBPB
UCCAGUU	3.055
ESR1.p2	2.983	ESR1
SP1.p2	2.930	SP1
HNF4A_NR2F1,2.p2	2.854	NR2F1 NR2F2 HNF4A
NFE2L1.p2	2.757	NFE2L1
IKZF1.p2	2.620	IKZF1
ZNF148.p2	2.551	ZNF148
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	2.495	ARNT MAX MYC USF1 BHLHB2 ARNT2
HSF1,2.p2	2.445	HSF1 HSF2
ADNP_IRX_SIX_ZHX.p2	2.361	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CUCCCAA	2.246
EN1,2.p2	2.193	EN1 EN2
MYFfamily.p2	2.180	MYOD1 MYF6 MYF5 MYOG
NANOG.p2	2.105	NANOG
PBX1.p2	1.952	PBX1
POU6F1.p2	1.887	POU6F1
SRF.p3	1.855	SRF
GATA6.p2	1.795	GATA6
NANOG{mouse}.p2	1.735	NANOG
ACAGUAC	1.639
SNAI1..3.p2	1.639	SNAI2 SNAI1 SNAI3
GLI1..3.p2	1.620	GLI1 GLI2 GLI3
GFI1B.p2	1.601	GFI1B
LEF1_TCF7_TCF7L1,2.p2	1.576	TCF7 TCF7L2 LEF1 TCF7L1
DBP.p2	1.560	DBP
AAGUGCU	1.551
CCCUGAG	1.444
MYB.p2	1.406	MYB
AAGGCAC	1.376
CUUUGGU	1.375
ZNF423.p2	1.353	ZNF423
HOX{A4,D4}.p2	1.315	HOXA4 HOXD4
GCUGGUG	1.310
HMX1.p2	1.295	HMX1
TFCP2.p2	1.291	TFCP2
HNF1A.p2	1.269	HNF1A
GTF2A1,2.p2	1.266	GTF2A1 GTF2A2
CRX.p2	1.221	CRX
MYOD1.p2	1.220	MYOD1
KLF12.p2	1.148	KLF12
RXRA_VDR{dimer}.p2	1.119	VDR	$logo of RXRA_VDR{dimer}.p2$
POU1F1.p2	1.087	POU1F1
RBPJ.p2	1.067	RBPJ
GFI1.p2	1.059	GFI1
YY1.p2	1.059	YY1
BPTF.p2	1.051	BPTF
PAX5.p2	0.975	PAX5
ATF4.p2	0.927	ATF4
AACCUGG	0.893
FOXA2.p3	0.888	FOXA2
EWSR1-FLI1.p2	0.867	FLI1 EWSR1
CCAGUGU	0.848
NR4A2.p2	0.828	NR4A2
ZBTB6.p2	0.821	ZBTB6
SMAD1..7,9.p2	0.804	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
EOMES.p2	0.798	EOMES
NR5A1,2.p2	0.782	NR5A1 NR5A2
FOSL2.p2	0.749	FOSL2
RXRG_dimer.p3	0.726	NR1H2 RXRA PPARG PPARA RXRB RXRG
FOXD3.p2	0.706	FOXD3
GGAGUGU	0.681
GGACGGA	0.646
CGUGUCU	0.561
AGCAGCA	0.552
UGCAUUG	0.550
CAGCAGG	0.525
NKX2-3_NKX2-5.p2	0.513	NKX2-5 NKX2-3
NFIX.p2	0.509	NFIX
GUAACAG	0.486
FOXQ1.p2	0.459	FOXQ1
ACUGGCC	0.458
PAX8.p2	0.455	PAX8
ZNF238.p2	0.443	ZNF238
NKX3-1.p2	0.439	NKX3-1
PATZ1.p2	0.421	PATZ1
AAUCUCA	0.403
NFIL3.p2	0.394	NFIL3
NFATC1..3.p2	0.390	NFATC3 NFATC2 NFATC1
POU5F1_SOX2{dimer}.p2	0.364	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CREB1.p2	0.363	CREB1
AGUGGUU	0.343
UAAGACU	0.321
ZNF143.p2	0.313	ZNF143
GGAAUGU	0.310
GUAGUGU	0.310
NKX2-1,4.p2	0.265	NKX2-1 NKX2-4
HES1.p2	0.263	HES1
UUGGCAA	0.239
UAUUGCU	0.235
POU2F1..3.p2	0.230	POU2F2 POU2F1 POU2F3
PPARG.p2	0.210	PPARG
GAGGUAG	0.207
EGR1..3.p2	0.192	EGR3 EGR1 EGR2
NFE2L2.p2	0.159	NFE2L2
GAUUGUC	0.154
GAUAUGU	0.152
UGUGCGU	0.130
EVI1.p2	0.125	EVI1
ACCCUGU	0.099
GAGAUGA	0.077
CGUACCG	0.076
HOXA9_MEIS1.p2	0.062	MEIS1 HOXA9
SPI1.p2	0.053	SPI1
PRDM1.p3	0.048	PRDM1
AGCUGCC	0.047
REST.p3	0.042	REST
ACCCGUA	0.041
VSX1,2.p2	0.017	VSX2 VSX1
CUACAGU	0.016
NRF1.p2	0.012	NRF1
GCUACAU	-0.012
CCUUCAU	-0.015
AAAGUGC	-0.022
HBP1_HMGB_SSRP1_UBTF.p2	-0.030	HMGB2 HMGB3 SSRP1 UBTF HBP1
ZIC1..3.p2	-0.036	ZIC1 ZIC2 ZIC3
CACAGUG	-0.064
TEAD1.p2	-0.126	TEAD1 TEAD2 TEAD3 TEAD4
CUX2.p2	-0.155	CUX2
UUGUUCG	-0.157
UGACCUA	-0.177
ACAUUCA	-0.195
UAAGACG	-0.212
ZBTB16.p2	-0.226	ZBTB16
ACUGCAU	-0.228
CAGUGCA	-0.232
FOX{F1,F2,J1}.p2	-0.233	FOXF2 FOXJ1 FOXF1
XBP1.p3	-0.234	XBP1
PAX3,7.p2	-0.248	PAX7 PAX3
AUGGCAC	-0.269
AACCGUU	-0.291
ETS1,2.p2	-0.315	ETS2 ETS1
ONECUT1,2.p2	-0.338	ONECUT2 ONECUT1
AUGUGCC	-0.340
GGAAGAC	-0.361
POU3F1..4.p2	-0.366	POU3F1 POU3F3 POU3F2 POU3F4
GUCAGUU	-0.368
PAX6.p2	-0.383	PAX6
UUGGCAC	-0.399
AUGACAC	-0.403
AR.p2	-0.404	AR
NFKB1_REL_RELA.p2	-0.411	RELA REL NFKB1
LMO2.p2	-0.419	LMO2
GTF2I.p2	-0.438	GTF2I
ACAGUAU	-0.523
STAT2,4,6.p2	-0.523	STAT2 STAT4 STAT6
RORA.p2	-0.526	RORA
HLF.p2	-0.526	HLF
ALX1.p2	-0.556	ALX1
SOX{8,9,10}.p2	-0.558	SOX9 SOX8 SOX10
ATF2.p2	-0.579	ATF2
PRRX1,2.p2	-0.581	PRRX2 PRRX1
TFAP4.p2	-0.591	TFAP4
GZF1.p2	-0.600	GZF1
GAGAACU	-0.604
AACAGUC	-0.614
UGCAUAG	-0.618
NR1H4.p2	-0.620	NR1H4
STAT1,3.p3	-0.623	STAT1 STAT3
GUGCAAA	-0.638
RXR{A,B,G}.p2	-0.638	RXRA RXRB RXRG
MAZ.p2	-0.644	MAZ
ELK1,4_GABP{A,B1}.p3	-0.657	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
FEV.p2	-0.671	FEV
AGCAGCG	-0.691
AACGGAA	-0.712
AIRE.p2	-0.714	AIRE
T.p2	-0.717	T
ARID5B.p2	-0.719	ARID5B
FOX{C1,C2}.p2	-0.750	FOXC1 FOXC2
SRY.p2	-0.824	SRY
AGCUUAU	-0.827
GAUCAGA	-0.883
UUGGUCC	-0.902
SOX2.p2	-0.925	SOX2
GATA1..3.p2	-0.952	GATA1 GATA2 GATA3
FOX{I1,J2}.p2	-0.953	FOXI1 FOXJ2
MEF2{A,B,C,D}.p2	-0.984	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NKX2-2,8.p2	-0.992	NKX2-2 NKX2-8
GGCAGUG	-0.995
AGGUAGU	-1.022
HOX{A5,B5}.p2	-1.024	HOXB5 HOXA5
RREB1.p2	-1.029	RREB1
NR3C1.p2	-1.032	NR3C1
NFE2.p2	-1.049	NFE2
HAND1,2.p2	-1.092	HAND1 HAND2
AAUGCCC	-1.097
PDX1.p2	-1.120	PDX1
EBF1.p2	-1.131	EBF1
NR6A1.p2	-1.149	NR6A1
HIF1A.p2	-1.151	HIF1A
GGCAAGA	-1.182
KLF4.p3	-1.189	KLF4
AAUCUCU	-1.190
UAAUGCU	-1.244
FOXL1.p2	-1.246	FOXL1
UCACAGU	-1.271
CCAGCAU	-1.272
ZNF384.p2	-1.286	ZNF384
TLX1..3_NFIC{dimer}.p2	-1.292	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
AAGGUGC	-1.378
RFX1..5_RFXANK_RFXAP.p2	-1.393	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
EHF.p2	-1.434	EHF
TBX4,5.p2	-1.451	TBX5 TBX4
UCAAGUA	-1.465
ESRRA.p2	-1.509	ESRRA
ATF5_CREB3.p2	-1.512	ATF5 CREB3
CDC5L.p2	-1.527	CDC5L
STAT5{A,B}.p2	-1.532	STAT5B STAT5A
MYBL2.p2	-1.577	MYBL2
FOXO1,3,4.p2	-1.602	FOXO1 FOXO4 FOXO3
FOXN1.p2	-1.608	FOXN1
SREBF1,2.p2	-1.670	SREBF1 SREBF2
MSX1,2.p2	-1.695	MSX1 MSX2
PAX4.p2	-1.715	PAX4
UCCCUUU	-1.736
CTCF.p2	-1.770	CTCF
GUAAACA	-1.771
UGAAAUG	-1.774
FOX{D1,D2}.p2	-1.858	FOXD2 FOXD1
UCACAUU	-1.887
AGUGCAA	-2.026
TCF4_dimer.p2	-2.057	TCF4
TLX2.p2	-2.071	TLX2
FOXP3.p2	-2.169	FOXP3
SPZ1.p2	-2.189	SPZ1
GCAGCAU	-2.286
JUN.p2	-2.352	JUN JUND JUNB
TFEB.p2	-2.352	TFEB
SOX17.p2	-2.355	SOX17
SOX5.p2	-2.394	SOX5
DMAP1_NCOR{1,2}_SMARC.p2	-2.416	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ZFP161.p2	-2.442	ZFP161
AUUGCAC	-2.456
SPIB.p2	-2.465	SPIB
NKX3-2.p2	-2.467	NKX3-2
TGIF1.p2	-2.505	TGIF1
MZF1.p2	-2.541	MZF1
TAL1_TCF{3,4,12}.p2	-2.585	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UUUUUGC	-2.586
LHX3,4.p2	-2.591	LHX3 LHX4
NHLH1,2.p2	-2.611	NHLH1 NHLH2
AGCACCA	-2.718
HMGA1,2.p2	-2.724	HMGA1 HMGA2
RUNX1..3.p2	-2.796	RUNX1 RUNX3 RUNX2
NKX6-1,2.p2	-3.016	NKX6-1 NKX6-2
IKZF2.p2	-3.057	IKZF2
AACACUG	-3.086
IRF1,2,7.p3	-3.116	IRF1 IRF2 IRF7
TFAP2B.p2	-3.125	TFAP2B
GGCUCAG	-3.153
AUGGCUU	-3.259
PAX2.p2	-3.388	PAX2
AAUACUG	-3.432
POU5F1.p2	-3.944	POU5F1
UGUGCUU	-4.181
CDX1,2,4.p2	-4.409	CDX1 CDX2 CDX4
MAFB.p2	-7.601	MAFB

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Sample name: ColorectalAdenocarcinoma

Sorted z-values for every WM.