ISMARA results: Lung

Sample name: Lung

Sorted Z-values histogram for the sample Lung

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
TBP.p2	10.219	TBP
HIC1.p2	7.538	HIC1
TFCP2.p2	7.398	TFCP2
POU2F1..3.p2	6.875	POU2F2 POU2F1 POU2F3
FOSL2.p2	6.469	FOSL2
TLX1..3_NFIC{dimer}.p2	6.363	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ZNF148.p2	5.420	ZNF148
ETS1,2.p2	5.264	ETS2 ETS1
NFIX.p2	5.111	NFIX
AR.p2	5.077	AR
MYFfamily.p2	4.941	MYOD1 MYF6 MYF5 MYOG
ESR1.p2	4.939	ESR1
EP300.p2	4.855	EP300
RUNX1..3.p2	4.771	RUNX1 RUNX3 RUNX2
CAGCAGG	4.729
GTF2A1,2.p2	4.715	GTF2A1 GTF2A2
HNF4A_NR2F1,2.p2	4.708	NR2F1 NR2F2 HNF4A
GLI1..3.p2	4.461	GLI1 GLI2 GLI3
HAND1,2.p2	4.419	HAND1 HAND2
TEAD1.p2	4.402	TEAD1 TEAD2 TEAD3 TEAD4
AAGGCAC	4.198
NR3C1.p2	4.159	NR3C1
SMAD1..7,9.p2	4.145	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
FEV.p2	4.123	FEV
TGIF1.p2	4.100	TGIF1
KLF12.p2	4.081	KLF12
NFKB1_REL_RELA.p2	3.603	RELA REL NFKB1
SP1.p2	3.546	SP1
TFEB.p2	3.537	TFEB
ZFP161.p2	3.498	ZFP161
PPARG.p2	3.400	PPARG
RXRA_VDR{dimer}.p2	3.392	VDR	$logo of RXRA_VDR{dimer}.p2$
CCCUGAG	3.363
NR5A1,2.p2	3.304	NR5A1 NR5A2
SRF.p3	3.285	SRF
STAT1,3.p3	3.283	STAT1 STAT3
SPIB.p2	3.273	SPIB
GGCAGUG	3.267
STAT2,4,6.p2	3.220	STAT2 STAT4 STAT6
FOX{D1,D2}.p2	3.220	FOXD2 FOXD1
HOX{A5,B5}.p2	3.177	HOXB5 HOXA5
POU5F1.p2	2.999	POU5F1
MEF2{A,B,C,D}.p2	2.963	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NHLH1,2.p2	2.891	NHLH1 NHLH2
NFATC1..3.p2	2.704	NFATC3 NFATC2 NFATC1
NFE2L1.p2	2.627	NFE2L1
FOX{C1,C2}.p2	2.621	FOXC1 FOXC2
FOXA2.p3	2.543	FOXA2
BACH2.p2	2.446	BACH2
PITX1..3.p2	2.438	PITX2 PITX3 PITX1
TFAP2{A,C}.p2	2.433	TFAP2C TFAP2A
CCAGUGU	2.404
KLF4.p3	2.391	KLF4
RXR{A,B,G}.p2	2.360	RXRA RXRB RXRG
NR6A1.p2	2.273	NR6A1
SNAI1..3.p2	2.239	SNAI2 SNAI1 SNAI3
ZBTB6.p2	2.220	ZBTB6
TFAP4.p2	2.210	TFAP4
CCAGCAU	2.202
ZNF238.p2	2.157	ZNF238
ATF2.p2	2.155	ATF2
NR1H4.p2	2.149	NR1H4
ZNF423.p2	2.124	ZNF423
JUN.p2	2.085	JUN JUND JUNB
AIRE.p2	2.047	AIRE
TP53.p2	2.026	TP53
POU6F1.p2	1.982	POU6F1
ZEB1.p2	1.951	ZEB1
MTF1.p2	1.905	MTF1
HBP1_HMGB_SSRP1_UBTF.p2	1.811	HMGB2 HMGB3 SSRP1 UBTF HBP1
EBF1.p2	1.791	EBF1
MAZ.p2	1.758	MAZ
GATA1..3.p2	1.707	GATA1 GATA2 GATA3
PAX4.p2	1.660	PAX4
IRF1,2,7.p3	1.647	IRF1 IRF2 IRF7
CTCF.p2	1.586	CTCF
EOMES.p2	1.553	EOMES
CDX1,2,4.p2	1.538	CDX1 CDX2 CDX4
AAAGUGC	1.521
PRDM1.p3	1.368	PRDM1
GAUUGUC	1.362
GGCUCAG	1.359
FOX{F1,F2,J1}.p2	1.359	FOXF2 FOXJ1 FOXF1
MYOD1.p2	1.357	MYOD1
RREB1.p2	1.304	RREB1
ADNP_IRX_SIX_ZHX.p2	1.295	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
NANOG{mouse}.p2	1.280	NANOG
GGAAGAC	1.232
GGACGGA	1.204
POU5F1_SOX2{dimer}.p2	1.188	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
TCF4_dimer.p2	1.164	TCF4
FOXO1,3,4.p2	1.156	FOXO1 FOXO4 FOXO3
NANOG.p2	1.145	NANOG
LMO2.p2	1.142	LMO2
ACCCUGU	1.041
CGUACCG	1.027
CDC5L.p2	1.004	CDC5L
GFI1B.p2	0.973	GFI1B
EN1,2.p2	0.972	EN1 EN2
HOXA9_MEIS1.p2	0.970	MEIS1 HOXA9
HNF1A.p2	0.934	HNF1A
AGCACCA	0.932
FOX{I1,J2}.p2	0.924	FOXI1 FOXJ2
CEBPA,B_DDIT3.p2	0.907	DDIT3 CEBPA CEBPB
T.p2	0.895	T
AUUGCAC	0.876
CGUGUCU	0.852
UAAUGCU	0.835
UUGGCAC	0.809
HMX1.p2	0.783	HMX1
SREBF1,2.p2	0.760	SREBF1 SREBF2
CUUUGGU	0.737
AAGUGCU	0.727
GATA6.p2	0.723	GATA6
ACAGUAC	0.710
POU3F1..4.p2	0.686	POU3F1 POU3F3 POU3F2 POU3F4
NFIL3.p2	0.678	NFIL3
AGCAGCG	0.637
AGUGCAA	0.609
CACAGUG	0.606
GCUACAU	0.598
ATF6.p2	0.590	ATF6
CRX.p2	0.580	CRX
VSX1,2.p2	0.572	VSX2 VSX1
ONECUT1,2.p2	0.552	ONECUT2 ONECUT1
GAUCAGA	0.541
GUAGUGU	0.527
GGAGUGU	0.517
UGCAUUG	0.475
AUGUGCC	0.433
NKX3-2.p2	0.427	NKX3-2
GUGCAAA	0.416
CUCCCAA	0.413
AGCUUAU	0.404
FOS_FOS{B,L1}_JUN{B,D}.p2	0.386	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NKX2-3_NKX2-5.p2	0.329	NKX2-5 NKX2-3
TFAP2B.p2	0.323	TFAP2B
NR4A2.p2	0.300	NR4A2
TLX2.p2	0.263	TLX2
UUGGCAA	0.243
MSX1,2.p2	0.198	MSX1 MSX2
PAX8.p2	0.194	PAX8
GGCAAGA	0.192
RORA.p2	0.185	RORA
PAX3,7.p2	0.146	PAX7 PAX3
UGUGCGU	0.143
DBP.p2	0.132	DBP
ARID5B.p2	0.121	ARID5B
UCCAGUU	0.100
TAL1_TCF{3,4,12}.p2	0.092	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UGCAUAG	0.077
LHX3,4.p2	0.068	LHX3 LHX4
AACGGAA	0.039
NFE2.p2	0.034	NFE2
POU1F1.p2	0.026	POU1F1
AAGGUGC	0.009
AAUGCCC	0.008
ACCCGUA	0.001
GZF1.p2	-0.041	GZF1
PATZ1.p2	-0.106	PATZ1
PBX1.p2	-0.111	PBX1
EWSR1-FLI1.p2	-0.111	FLI1 EWSR1
ATF4.p2	-0.113	ATF4
DMAP1_NCOR{1,2}_SMARC.p2	-0.145	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
UGACCUA	-0.155
IKZF1.p2	-0.170	IKZF1
GAGAACU	-0.214
AACCUGG	-0.229
HOX{A6,A7,B6,B7}.p2	-0.236	HOXB6 HOXA7 HOXB7 HOXA6
NKX2-1,4.p2	-0.250	NKX2-1 NKX2-4
GAGAUGA	-0.269
GAUAUGU	-0.280
ACUGGCC	-0.311
RXRG_dimer.p3	-0.315	NR1H2 RXRA PPARG PPARA RXRB RXRG
CUX2.p2	-0.343	CUX2
XBP1.p3	-0.344	XBP1
PDX1.p2	-0.422	PDX1
AUGGCAC	-0.426
ACAGUAU	-0.437
AAUCUCA	-0.462
PAX6.p2	-0.464	PAX6
AACCGUU	-0.528
CCUUCAU	-0.581
UAAGACU	-0.597
NKX6-1,2.p2	-0.628	NKX6-1 NKX6-2
FOXP3.p2	-0.644	FOXP3
LEF1_TCF7_TCF7L1,2.p2	-0.726	TCF7 TCF7L2 LEF1 TCF7L1
UCCCUUU	-0.782
GUAACAG	-0.787
GUCAGUU	-0.793
NFY{A,B,C}.p2	-0.803	NFYC NFYB NFYA
AGGUAGU	-0.860
AGCAGCA	-0.922
GCUGGUG	-1.024
SOX2.p2	-1.037	SOX2
HIF1A.p2	-1.054	HIF1A
AGUGGUU	-1.074
NKX3-1.p2	-1.124	NKX3-1
ZNF384.p2	-1.156	ZNF384
AACAGUC	-1.195
AHR_ARNT_ARNT2.p2	-1.197	ARNT AHR ARNT2
EVI1.p2	-1.229	EVI1
bHLH_family.p2	-1.238	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
AAUCUCU	-1.270
UAUUGCU	-1.281
CUACAGU	-1.306
AGCUGCC	-1.308
HMGA1,2.p2	-1.427	HMGA1 HMGA2
SPZ1.p2	-1.466	SPZ1
ACUGCAU	-1.483
SOX17.p2	-1.534	SOX17
GAGGUAG	-1.534
RFX1..5_RFXANK_RFXAP.p2	-1.548	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
CREB1.p2	-1.549	CREB1
FOXQ1.p2	-1.554	FOXQ1
UUGGUCC	-1.609
AUGACAC	-1.621
UAAGACG	-1.638
SOX5.p2	-1.668	SOX5
REST.p3	-1.700	REST
AAUACUG	-1.738
SRY.p2	-1.751	SRY
SPI1.p2	-1.769	SPI1
ALX1.p2	-1.808	ALX1
FOXD3.p2	-1.813	FOXD3
HLF.p2	-1.823	HLF
NKX2-2,8.p2	-1.859	NKX2-2 NKX2-8
HOX{A4,D4}.p2	-1.879	HOXA4 HOXD4
HSF1,2.p2	-1.962	HSF1 HSF2
RBPJ.p2	-2.000	RBPJ
SOX{8,9,10}.p2	-2.095	SOX9 SOX8 SOX10
ACAUUCA	-2.318
GCAGCAU	-2.402
PAX5.p2	-2.512	PAX5
AUGGCUU	-2.526
TBX4,5.p2	-2.576	TBX5 TBX4
MYBL2.p2	-2.590	MYBL2
UCACAGU	-2.630
UUGUUCG	-2.681
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-2.688	ARNT MAX MYC USF1 BHLHB2 ARNT2
GTF2I.p2	-2.704	GTF2I
EGR1..3.p2	-2.705	EGR3 EGR1 EGR2
GGAAUGU	-2.707
FOXN1.p2	-2.760	FOXN1
IKZF2.p2	-2.783	IKZF2
BPTF.p2	-2.873	BPTF
HES1.p2	-2.913	HES1
FOXL1.p2	-2.917	FOXL1
UCACAUU	-2.951
CAGUGCA	-3.016
NFE2L2.p2	-3.165	NFE2L2
ESRRA.p2	-3.499	ESRRA
MZF1.p2	-3.780	MZF1
STAT5{A,B}.p2	-3.820	STAT5B STAT5A
PAX2.p2	-3.894	PAX2
ELF1,2,4.p2	-3.954	ELF2 ELF1 ELF4
ZIC1..3.p2	-4.087	ZIC1 ZIC2 ZIC3
GFI1.p2	-4.347	GFI1
UGUGCUU	-4.512
UGAAAUG	-4.728
GUAAACA	-4.769
EHF.p2	-4.924	EHF
AACACUG	-5.213
ATF5_CREB3.p2	-5.266	ATF5 CREB3
YY1.p2	-5.348	YY1
UUUUUGC	-5.546
PRRX1,2.p2	-6.009	PRRX2 PRRX1
MAFB.p2	-6.010	MAFB
ZBTB16.p2	-6.095	ZBTB16
ZNF143.p2	-6.561	ZNF143
ELK1,4_GABP{A,B1}.p3	-6.587	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
UCAAGUA	-6.788
TFDP1.p2	-6.840	TFDP1
NRF1.p2	-9.137	NRF1
MYB.p2	-11.724	MYB
E2F1..5.p2	-12.311	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: Lung

Sorted z-values for every WM.