ISMARA results: NCI60_1

Sample name: NCI60_1_KM12

Sorted Z-values histogram for the sample NCI60_1_KM12

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	9.027	YY1
NFY{A,B,C}.p2	8.547	NFYC NFYB NFYA
NRF1.p2	8.070	NRF1
E2F1..5.p2	7.577	E2F4 E2F5 E2F2 E2F1 E2F3
ELF1,2,4.p2	5.580	ELF2 ELF1 ELF4
ZNF143.p2	5.078	ZNF143
ELK1,4_GABP{A,B1}.p3	5.069	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ATF5_CREB3.p2	5.038	ATF5 CREB3
MYB.p2	4.327	MYB
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	4.106	ARNT MAX MYC USF1 BHLHB2 ARNT2
bHLH_family.p2	3.675	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
EHF.p2	3.674	EHF
TFDP1.p2	3.659	TFDP1
ZEB1.p2	3.213	ZEB1
FOXD3.p2	3.211	FOXD3
BACH2.p2	3.165	BACH2
HIF1A.p2	3.144	HIF1A
AHR_ARNT_ARNT2.p2	3.116	ARNT AHR ARNT2
XBP1.p3	3.047	XBP1
BPTF.p2	2.951	BPTF
EP300.p2	2.918	EP300
IKZF1.p2	2.843	IKZF1
FOS_FOS{B,L1}_JUN{B,D}.p2	2.703	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
PAX5.p2	2.680	PAX5
GGAAUGU	2.664
UCAAGUA	2.647
FOXN1.p2	2.596	FOXN1
SNAI1..3.p2	2.523	SNAI2 SNAI1 SNAI3
HES1.p2	2.522	HES1
UCACAUU	2.118
FOXA2.p3	2.045	FOXA2
KLF4.p3	1.956	KLF4
ATF4.p2	1.860	ATF4
UCCAGUU	1.845
ESRRA.p2	1.838	ESRRA
GFI1B.p2	1.826	GFI1B
NKX3-1.p2	1.713	NKX3-1
PBX1.p2	1.701	PBX1
TP53.p2	1.668	TP53
NR4A2.p2	1.449	NR4A2
SPI1.p2	1.429	SPI1
ZNF384.p2	1.385	ZNF384
NR5A1,2.p2	1.354	NR5A1 NR5A2
EWSR1-FLI1.p2	1.341	FLI1 EWSR1
ZBTB16.p2	1.282	ZBTB16
RXRG_dimer.p3	1.257	NR1H2 RXRA PPARG PPARA RXRB RXRG
CCAGUGU	1.170
GCUACAU	1.089
STAT5{A,B}.p2	1.080	STAT5B STAT5A
ACAGUAC	1.067
GGAGUGU	1.038
NKX3-2.p2	1.001	NKX3-2
HOX{A4,D4}.p2	0.980	HOXA4 HOXD4
CREB1.p2	0.957	CREB1
SOX17.p2	0.954	SOX17
GUAGUGU	0.903
UUGUUCG	0.877
ZNF148.p2	0.829	ZNF148
GUAACAG	0.827
CRX.p2	0.825	CRX
AGCUUAU	0.823
SP1.p2	0.777	SP1
ADNP_IRX_SIX_ZHX.p2	0.766	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
PATZ1.p2	0.724	PATZ1
AGCAGCG	0.693
CUUUGGU	0.632
GAUUGUC	0.627
CUACAGU	0.615
AUGGCAC	0.614
UUGGUCC	0.601
ATF2.p2	0.601	ATF2
SOX5.p2	0.601	SOX5
T.p2	0.574	T
AGUGCAA	0.571
PRRX1,2.p2	0.566	PRRX2 PRRX1
AGUGGUU	0.520
AAUCUCA	0.472
UAAGACG	0.398
UAAUGCU	0.391
SOX{8,9,10}.p2	0.371	SOX9 SOX8 SOX10
AAUCUCU	0.364
AACCUGG	0.348
NFE2L1.p2	0.333	NFE2L1
ACAGUAU	0.332
AAGGCAC	0.324
UCACAGU	0.321
MAFB.p2	0.307	MAFB
CAGUGCA	0.241
POU6F1.p2	0.234	POU6F1
SRF.p3	0.207	SRF
GAUAUGU	0.192
HOX{A6,A7,B6,B7}.p2	0.181	HOXB6 HOXA7 HOXB7 HOXA6
NFE2.p2	0.173	NFE2
UGAAAUG	0.163
UUGGCAC	0.161
VSX1,2.p2	0.158	VSX2 VSX1
SREBF1,2.p2	0.149	SREBF1 SREBF2
AAUGCCC	0.141
ACUGCAU	0.137
DMAP1_NCOR{1,2}_SMARC.p2	0.122	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AACCGUU	0.110
ACCCGUA	0.093
PRDM1.p3	0.074	PRDM1
AACAGUC	0.073
CCUUCAU	0.072
ACUGGCC	0.071
GFI1.p2	0.057	GFI1
AUGACAC	0.032
CTCF.p2	0.019	CTCF
LMO2.p2	0.016	LMO2
PAX6.p2	0.013	PAX6
HMGA1,2.p2	0.007	HMGA1 HMGA2
PAX3,7.p2	-0.007	PAX7 PAX3
GUCAGUU	-0.022
PAX8.p2	-0.061	PAX8
ONECUT1,2.p2	-0.078	ONECUT2 ONECUT1
PDX1.p2	-0.101	PDX1
GZF1.p2	-0.108	GZF1
NKX2-2,8.p2	-0.109	NKX2-2 NKX2-8
AUUGCAC	-0.113
GATA6.p2	-0.114	GATA6
POU3F1..4.p2	-0.121	POU3F1 POU3F3 POU3F2 POU3F4
CGUGUCU	-0.123
ACCCUGU	-0.148
UGCAUUG	-0.164
SOX2.p2	-0.200	SOX2
AACGGAA	-0.209
AGCUGCC	-0.212
GCUGGUG	-0.230
UUGGCAA	-0.255
UAAGACU	-0.275
GGACGGA	-0.280
ARID5B.p2	-0.285	ARID5B
CGUACCG	-0.287
HLF.p2	-0.292	HLF
SPIB.p2	-0.328	SPIB
NFE2L2.p2	-0.338	NFE2L2
ATF6.p2	-0.338	ATF6
RXRA_VDR{dimer}.p2	-0.345	VDR	$logo of RXRA_VDR{dimer}.p2$
PITX1..3.p2	-0.348	PITX2 PITX3 PITX1
UGACCUA	-0.356
SPZ1.p2	-0.365	SPZ1
UGUGCGU	-0.372
FOXL1.p2	-0.377	FOXL1
TBP.p2	-0.392	TBP
CEBPA,B_DDIT3.p2	-0.406	DDIT3 CEBPA CEBPB
FOXQ1.p2	-0.411	FOXQ1
FOX{I1,J2}.p2	-0.415	FOXI1 FOXJ2
ZFP161.p2	-0.423	ZFP161
PPARG.p2	-0.436	PPARG
RBPJ.p2	-0.454	RBPJ
EBF1.p2	-0.468	EBF1
FOXO1,3,4.p2	-0.468	FOXO1 FOXO4 FOXO3
TBX4,5.p2	-0.478	TBX5 TBX4
AUGUGCC	-0.495
SRY.p2	-0.510	SRY
MSX1,2.p2	-0.528	MSX1 MSX2
NR6A1.p2	-0.546	NR6A1
GGCAAGA	-0.566
GUAAACA	-0.576
GAGAUGA	-0.584
HNF1A.p2	-0.596	HNF1A
NKX2-1,4.p2	-0.600	NKX2-1 NKX2-4
NFIL3.p2	-0.636	NFIL3
NFIX.p2	-0.655	NFIX
AGGUAGU	-0.659
NFATC1..3.p2	-0.686	NFATC3 NFATC2 NFATC1
UGUGCUU	-0.691
FOX{F1,F2,J1}.p2	-0.761	FOXF2 FOXJ1 FOXF1
FOX{C1,C2}.p2	-0.778	FOXC1 FOXC2
GAGGUAG	-0.784
NKX6-1,2.p2	-0.792	NKX6-1 NKX6-2
TLX2.p2	-0.792	TLX2
AAGUGCU	-0.821
GAGAACU	-0.840
POU5F1_SOX2{dimer}.p2	-0.854	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
UCCCUUU	-0.858
CCCUGAG	-0.887
EN1,2.p2	-0.888	EN1 EN2
CACAGUG	-0.910
GUGCAAA	-0.951
RXR{A,B,G}.p2	-0.985	RXRA RXRB RXRG
GAUCAGA	-0.985
GCAGCAU	-0.996
CDC5L.p2	-1.004	CDC5L
GTF2I.p2	-1.009	GTF2I
NR3C1.p2	-1.013	NR3C1
NKX2-3_NKX2-5.p2	-1.028	NKX2-5 NKX2-3
ZIC1..3.p2	-1.064	ZIC1 ZIC2 ZIC3
TAL1_TCF{3,4,12}.p2	-1.077	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
AR.p2	-1.091	AR
CDX1,2,4.p2	-1.102	CDX1 CDX2 CDX4
MTF1.p2	-1.106	MTF1
AUGGCUU	-1.108
ZBTB6.p2	-1.145	ZBTB6
ZNF238.p2	-1.153	ZNF238
HOXA9_MEIS1.p2	-1.165	MEIS1 HOXA9
ACAUUCA	-1.182
AGCAGCA	-1.194
LEF1_TCF7_TCF7L1,2.p2	-1.203	TCF7 TCF7L2 LEF1 TCF7L1
NR1H4.p2	-1.224	NR1H4
AACACUG	-1.228
LHX3,4.p2	-1.238	LHX3 LHX4
EOMES.p2	-1.307	EOMES
TFAP2B.p2	-1.313	TFAP2B
CUX2.p2	-1.329	CUX2
NANOG.p2	-1.372	NANOG
UGCAUAG	-1.395
UAUUGCU	-1.407
NANOG{mouse}.p2	-1.421	NANOG
TFAP4.p2	-1.431	TFAP4
AAGGUGC	-1.489
CCAGCAU	-1.502
PAX2.p2	-1.517	PAX2
RORA.p2	-1.519	RORA
GTF2A1,2.p2	-1.576	GTF2A1 GTF2A2
STAT1,3.p3	-1.626	STAT1 STAT3
IKZF2.p2	-1.669	IKZF2
FOSL2.p2	-1.675	FOSL2
HSF1,2.p2	-1.675	HSF1 HSF2
DBP.p2	-1.683	DBP
AGCACCA	-1.689
MZF1.p2	-1.691	MZF1
AIRE.p2	-1.715	AIRE
TFAP2{A,C}.p2	-1.770	TFAP2C TFAP2A
GGAAGAC	-1.801
ALX1.p2	-1.816	ALX1
POU2F1..3.p2	-1.918	POU2F2 POU2F1 POU2F3
MYFfamily.p2	-1.933	MYOD1 MYF6 MYF5 MYOG
ESR1.p2	-1.946	ESR1
NFKB1_REL_RELA.p2	-1.972	RELA REL NFKB1
MYBL2.p2	-1.988	MYBL2
MEF2{A,B,C,D}.p2	-1.993	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HNF4A_NR2F1,2.p2	-2.017	NR2F1 NR2F2 HNF4A
GGCAGUG	-2.019
ZNF423.p2	-2.026	ZNF423
JUN.p2	-2.077	JUN JUND JUNB
EGR1..3.p2	-2.141	EGR3 EGR1 EGR2
STAT2,4,6.p2	-2.170	STAT2 STAT4 STAT6
HMX1.p2	-2.177	HMX1
MYOD1.p2	-2.311	MYOD1
POU1F1.p2	-2.378	POU1F1
HOX{A5,B5}.p2	-2.399	HOXB5 HOXA5
PAX4.p2	-2.429	PAX4
HBP1_HMGB_SSRP1_UBTF.p2	-2.441	HMGB2 HMGB3 SSRP1 UBTF HBP1
HIC1.p2	-2.461	HIC1
FOX{D1,D2}.p2	-2.472	FOXD2 FOXD1
REST.p3	-2.494	REST
GLI1..3.p2	-2.527	GLI1 GLI2 GLI3
ETS1,2.p2	-2.595	ETS2 ETS1
POU5F1.p2	-2.670	POU5F1
AAAGUGC	-2.692
CAGCAGG	-2.698
IRF1,2,7.p3	-2.844	IRF1 IRF2 IRF7
MAZ.p2	-2.859	MAZ
EVI1.p2	-2.890	EVI1
FOXP3.p2	-2.909	FOXP3
TCF4_dimer.p2	-2.939	TCF4
NHLH1,2.p2	-3.015	NHLH1 NHLH2
FEV.p2	-3.040	FEV
AAUACUG	-3.134
TEAD1.p2	-3.145	TEAD1 TEAD2 TEAD3 TEAD4
TFEB.p2	-3.176	TFEB
GATA1..3.p2	-3.220	GATA1 GATA2 GATA3
GGCUCAG	-3.224
TFCP2.p2	-3.665	TFCP2
HAND1,2.p2	-3.734	HAND1 HAND2
SMAD1..7,9.p2	-3.842	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
RFX1..5_RFXANK_RFXAP.p2	-3.845	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
TLX1..3_NFIC{dimer}.p2	-3.847	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
RUNX1..3.p2	-4.276	RUNX1 RUNX3 RUNX2
KLF12.p2	-4.738	KLF12
UUUUUGC	-5.067
RREB1.p2	-5.523	RREB1
TGIF1.p2	-5.595	TGIF1
CUCCCAA	-7.156

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Sample name: NCI60_1_KM12

Sorted z-values for every WM.