ISMARA results: NCI60_1

Sample name: NCI60_1_M14

Sorted Z-values histogram for the sample NCI60_1_M14

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
NRF1.p2	6.781	NRF1
E2F1..5.p2	6.483	E2F4 E2F5 E2F2 E2F1 E2F3
NFY{A,B,C}.p2	6.309	NFYC NFYB NFYA
ELK1,4_GABP{A,B1}.p3	5.749	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
TFDP1.p2	5.603	TFDP1
ELF1,2,4.p2	4.696	ELF2 ELF1 ELF4
XBP1.p3	3.949	XBP1
KLF4.p3	3.894	KLF4
ZNF143.p2	3.763	ZNF143
GGAAUGU	3.341
EHF.p2	3.279	EHF
AAGGCAC	3.274
bHLH_family.p2	3.251	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
PAX5.p2	3.159	PAX5
MYB.p2	3.094	MYB
HIF1A.p2	2.884	HIF1A
ATF4.p2	2.717	ATF4
ESRRA.p2	2.698	ESRRA
FOXN1.p2	2.436	FOXN1
YY1.p2	2.427	YY1
BACH2.p2	2.380	BACH2
UCAAGUA	2.321
GUGCAAA	2.266
AHR_ARNT_ARNT2.p2	2.248	ARNT AHR ARNT2
BPTF.p2	2.244	BPTF
AACACUG	2.164
PBX1.p2	2.081	PBX1
HMGA1,2.p2	2.014	HMGA1 HMGA2
HOX{A6,A7,B6,B7}.p2	2.004	HOXB6 HOXA7 HOXB7 HOXA6
AGUGGUU	1.939
GUAGUGU	1.908
TFEB.p2	1.811	TFEB
HOX{A4,D4}.p2	1.792	HOXA4 HOXD4
NFATC1..3.p2	1.771	NFATC3 NFATC2 NFATC1
MSX1,2.p2	1.692	MSX1 MSX2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.674	ARNT MAX MYC USF1 BHLHB2 ARNT2
UUGGCAA	1.584
TP53.p2	1.544	TP53
ATF5_CREB3.p2	1.533	ATF5 CREB3
NANOG.p2	1.477	NANOG
NFE2.p2	1.475	NFE2
NFE2L2.p2	1.464	NFE2L2
ACAGUAU	1.305
SOX17.p2	1.299	SOX17
EWSR1-FLI1.p2	1.292	FLI1 EWSR1
ARID5B.p2	1.287	ARID5B
SPI1.p2	1.226	SPI1
TFAP2B.p2	1.201	TFAP2B
GUAACAG	1.199
ESR1.p2	1.177	ESR1
ACAGUAC	1.116
SREBF1,2.p2	1.036	SREBF1 SREBF2
ONECUT1,2.p2	1.014	ONECUT2 ONECUT1
EP300.p2	0.977	EP300
GCUGGUG	0.945
CAGUGCA	0.939
RBPJ.p2	0.884	RBPJ
UGAAAUG	0.843
AAUGCCC	0.842
FOXD3.p2	0.840	FOXD3
UCCAGUU	0.840
PRRX1,2.p2	0.833	PRRX2 PRRX1
CREB1.p2	0.779	CREB1
MAFB.p2	0.751	MAFB
NKX2-2,8.p2	0.686	NKX2-2 NKX2-8
CCAGUGU	0.679
CTCF.p2	0.678	CTCF
CCUUCAU	0.640
UUGGUCC	0.634
AGCUUAU	0.613
PRDM1.p3	0.607	PRDM1
LHX3,4.p2	0.606	LHX3 LHX4
AACCUGG	0.596
GGCAAGA	0.575
FOS_FOS{B,L1}_JUN{B,D}.p2	0.572	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NR6A1.p2	0.570	NR6A1
GFI1.p2	0.567	GFI1
HES1.p2	0.518	HES1
GGAGUGU	0.480
GFI1B.p2	0.437	GFI1B
NKX6-1,2.p2	0.411	NKX6-1 NKX6-2
AAUACUG	0.387
CUACAGU	0.366
HMX1.p2	0.352	HMX1
PAX6.p2	0.332	PAX6
NKX3-2.p2	0.332	NKX3-2
CCAGCAU	0.306
CUUUGGU	0.279
AGCACCA	0.267
AACCGUU	0.250
UAAGACG	0.250
CDX1,2,4.p2	0.242	CDX1 CDX2 CDX4
FOXQ1.p2	0.186	FOXQ1
ACAUUCA	0.173
CRX.p2	0.162	CRX
ZNF238.p2	0.157	ZNF238
SRY.p2	0.142	SRY
GZF1.p2	0.138	GZF1
UGCAUUG	0.138
ZNF384.p2	0.126	ZNF384
GAUUGUC	0.121
HIC1.p2	0.095	HIC1
ACCCGUA	0.081
CGUGUCU	0.077
UCACAUU	0.071
NR3C1.p2	0.060	NR3C1
AUGACAC	0.058
AAUCUCA	0.056
SP1.p2	0.042	SP1
EOMES.p2	0.031	EOMES
NFE2L1.p2	0.028	NFE2L1
RXRG_dimer.p3	0.015	NR1H2 RXRA PPARG PPARA RXRB RXRG
UGACCUA	0.009
UUUUUGC	-0.059
AUGGCAC	-0.072
NR5A1,2.p2	-0.078	NR5A1 NR5A2
AUGUGCC	-0.110
IRF1,2,7.p3	-0.110	IRF1 IRF2 IRF7
ACUGCAU	-0.120
IKZF2.p2	-0.124	IKZF2
NKX3-1.p2	-0.125	NKX3-1
PAX3,7.p2	-0.148	PAX7 PAX3
ZIC1..3.p2	-0.165	ZIC1 ZIC2 ZIC3
GGAAGAC	-0.173
GAUAUGU	-0.185
GCUACAU	-0.185
SOX2.p2	-0.191	SOX2
UGUGCUU	-0.195
PAX8.p2	-0.212	PAX8
HOXA9_MEIS1.p2	-0.220	MEIS1 HOXA9
AAGGUGC	-0.229
ACUGGCC	-0.237
GCAGCAU	-0.247
AGCAGCG	-0.262
SOX{8,9,10}.p2	-0.278	SOX9 SOX8 SOX10
UGUGCGU	-0.278
POU3F1..4.p2	-0.304	POU3F1 POU3F3 POU3F2 POU3F4
T.p2	-0.306	T
ZNF148.p2	-0.308	ZNF148
AAAGUGC	-0.312
SPZ1.p2	-0.333	SPZ1
CGUACCG	-0.348
AAUCUCU	-0.362
PDX1.p2	-0.364	PDX1
ZBTB16.p2	-0.366	ZBTB16
MYBL2.p2	-0.383	MYBL2
ZEB1.p2	-0.384	ZEB1
AACGGAA	-0.392
NHLH1,2.p2	-0.412	NHLH1 NHLH2
UCACAGU	-0.414
FOSL2.p2	-0.417	FOSL2
TAL1_TCF{3,4,12}.p2	-0.445	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GATA1..3.p2	-0.502	GATA1 GATA2 GATA3
LEF1_TCF7_TCF7L1,2.p2	-0.505	TCF7 TCF7L2 LEF1 TCF7L1
CEBPA,B_DDIT3.p2	-0.521	DDIT3 CEBPA CEBPB
UAUUGCU	-0.529
PAX4.p2	-0.530	PAX4
TFAP4.p2	-0.532	TFAP4
HBP1_HMGB_SSRP1_UBTF.p2	-0.547	HMGB2 HMGB3 SSRP1 UBTF HBP1
AACAGUC	-0.550
ADNP_IRX_SIX_ZHX.p2	-0.597	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CAGCAGG	-0.615
AUGGCUU	-0.620
CUX2.p2	-0.622	CUX2
GAUCAGA	-0.643
GUAAACA	-0.693
AGGUAGU	-0.703
NKX2-3_NKX2-5.p2	-0.708	NKX2-5 NKX2-3
IKZF1.p2	-0.721	IKZF1
SOX5.p2	-0.721	SOX5
GGCAGUG	-0.724
STAT2,4,6.p2	-0.725	STAT2 STAT4 STAT6
UAAGACU	-0.745
PATZ1.p2	-0.762	PATZ1
FOXP3.p2	-0.766	FOXP3
GGACGGA	-0.777
FOXO1,3,4.p2	-0.817	FOXO1 FOXO4 FOXO3
VSX1,2.p2	-0.821	VSX2 VSX1
RXR{A,B,G}.p2	-0.847	RXRA RXRB RXRG
NFIX.p2	-0.897	NFIX
UUGGCAC	-0.905
AAGUGCU	-0.909
MEF2{A,B,C,D}.p2	-0.922	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
DBP.p2	-0.959	DBP
GAGAACU	-0.975
POU6F1.p2	-0.985	POU6F1
ATF6.p2	-0.998	ATF6
SPIB.p2	-1.007	SPIB
AGUGCAA	-1.044
DMAP1_NCOR{1,2}_SMARC.p2	-1.055	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CCCUGAG	-1.074
ZNF423.p2	-1.117	ZNF423
UUGUUCG	-1.131
FOX{F1,F2,J1}.p2	-1.149	FOXF2 FOXJ1 FOXF1
STAT5{A,B}.p2	-1.174	STAT5B STAT5A
UAAUGCU	-1.185
CDC5L.p2	-1.191	CDC5L
PITX1..3.p2	-1.206	PITX2 PITX3 PITX1
TEAD1.p2	-1.223	TEAD1 TEAD2 TEAD3 TEAD4
FOX{I1,J2}.p2	-1.227	FOXI1 FOXJ2
RORA.p2	-1.250	RORA
PPARG.p2	-1.256	PPARG
TLX2.p2	-1.285	TLX2
FOX{D1,D2}.p2	-1.313	FOXD2 FOXD1
NKX2-1,4.p2	-1.339	NKX2-1 NKX2-4
ACCCUGU	-1.364
SRF.p3	-1.365	SRF
GUCAGUU	-1.401
ZBTB6.p2	-1.419	ZBTB6
FOXA2.p3	-1.420	FOXA2
HLF.p2	-1.451	HLF
ZFP161.p2	-1.462	ZFP161
ATF2.p2	-1.473	ATF2
UGCAUAG	-1.479
UCCCUUU	-1.554
RXRA_VDR{dimer}.p2	-1.598	VDR	$logo of RXRA_VDR{dimer}.p2$
RFX1..5_RFXANK_RFXAP.p2	-1.616	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
AGCUGCC	-1.636
HSF1,2.p2	-1.679	HSF1 HSF2
ETS1,2.p2	-1.705	ETS2 ETS1
EGR1..3.p2	-1.706	EGR3 EGR1 EGR2
AR.p2	-1.726	AR
STAT1,3.p3	-1.736	STAT1 STAT3
TLX1..3_NFIC{dimer}.p2	-1.737	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
AUUGCAC	-1.767
RUNX1..3.p2	-1.775	RUNX1 RUNX3 RUNX2
LMO2.p2	-1.783	LMO2
ALX1.p2	-1.791	ALX1
EBF1.p2	-1.805	EBF1
GTF2A1,2.p2	-1.809	GTF2A1 GTF2A2
NFIL3.p2	-1.844	NFIL3
PAX2.p2	-1.888	PAX2
GAGGUAG	-1.901
JUN.p2	-1.931	JUN JUND JUNB
MAZ.p2	-1.973	MAZ
NR1H4.p2	-2.005	NR1H4
NR4A2.p2	-2.032	NR4A2
FOX{C1,C2}.p2	-2.140	FOXC1 FOXC2
POU5F1_SOX2{dimer}.p2	-2.206	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CUCCCAA	-2.262
GAGAUGA	-2.285
MYOD1.p2	-2.287	MYOD1
HNF4A_NR2F1,2.p2	-2.289	NR2F1 NR2F2 HNF4A
GTF2I.p2	-2.311	GTF2I
NANOG{mouse}.p2	-2.317	NANOG
FOXL1.p2	-2.338	FOXL1
NFKB1_REL_RELA.p2	-2.398	RELA REL NFKB1
TFAP2{A,C}.p2	-2.404	TFAP2C TFAP2A
MZF1.p2	-2.524	MZF1
POU1F1.p2	-2.551	POU1F1
EN1,2.p2	-2.579	EN1 EN2
AGCAGCA	-2.631
REST.p3	-2.763	REST
HOX{A5,B5}.p2	-2.765	HOXB5 HOXA5
RREB1.p2	-2.920	RREB1
AIRE.p2	-2.929	AIRE
GLI1..3.p2	-2.934	GLI1 GLI2 GLI3
TCF4_dimer.p2	-3.123	TCF4
TGIF1.p2	-3.212	TGIF1
HNF1A.p2	-3.292	HNF1A
GATA6.p2	-3.364	GATA6
CACAGUG	-3.497
POU5F1.p2	-3.607	POU5F1
MTF1.p2	-3.884	MTF1
POU2F1..3.p2	-3.905	POU2F2 POU2F1 POU2F3
GGCUCAG	-4.048
TFCP2.p2	-4.076	TFCP2
HAND1,2.p2	-4.117	HAND1 HAND2
EVI1.p2	-4.182	EVI1
MYFfamily.p2	-4.366	MYOD1 MYF6 MYF5 MYOG
KLF12.p2	-4.520	KLF12
FEV.p2	-4.753	FEV
SNAI1..3.p2	-4.877	SNAI2 SNAI1 SNAI3
SMAD1..7,9.p2	-5.065	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TBP.p2	-5.232	TBP
TBX4,5.p2	-5.382	TBX5 TBX4

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Sample name: NCI60_1_M14

Sorted z-values for every WM.