ISMARA results: Pons

Sample name: Pons

Sorted Z-values histogram for the sample Pons

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
CUCCCAA	12.603
REST.p3	9.250	REST
RFX1..5_RFXANK_RFXAP.p2	9.248	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
RREB1.p2	7.786	RREB1
KLF12.p2	7.544	KLF12
JUN.p2	6.770	JUN JUND JUNB
MTF1.p2	6.579	MTF1
MYOD1.p2	6.573	MYOD1
UUUUUGC	6.319
ZIC1..3.p2	6.153	ZIC1 ZIC2 ZIC3
UGUGCUU	6.121
GTF2I.p2	5.866	GTF2I
TGIF1.p2	5.684	TGIF1
HIC1.p2	5.649	HIC1
SMAD1..7,9.p2	5.463	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GGCUCAG	5.156
GGCAGUG	5.024
TLX1..3_NFIC{dimer}.p2	4.730	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
POU5F1.p2	4.714	POU5F1
EVI1.p2	4.680	EVI1
EGR1..3.p2	4.653	EGR3 EGR1 EGR2
NHLH1,2.p2	4.572	NHLH1 NHLH2
TCF4_dimer.p2	4.444	TCF4
TAL1_TCF{3,4,12}.p2	4.369	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NKX2-3_NKX2-5.p2	4.345	NKX2-5 NKX2-3
GTF2A1,2.p2	4.314	GTF2A1 GTF2A2
MZF1.p2	4.201	MZF1
UGCAUAG	4.157
EBF1.p2	3.896	EBF1
FEV.p2	3.833	FEV
CAGCAGG	3.823
GATA1..3.p2	3.719	GATA1 GATA2 GATA3
ALX1.p2	3.707	ALX1
UCCCUUU	3.528
FOXP3.p2	3.504	FOXP3
TBX4,5.p2	3.472	TBX5 TBX4
HOX{A6,A7,B6,B7}.p2	3.386	HOXB6 HOXA7 HOXB7 HOXA6
NR1H4.p2	3.299	NR1H4
FOX{I1,J2}.p2	3.242	FOXI1 FOXJ2
MEF2{A,B,C,D}.p2	3.169	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TFCP2.p2	3.138	TFCP2
STAT1,3.p3	3.016	STAT1 STAT3
SOX{8,9,10}.p2	2.991	SOX9 SOX8 SOX10
LMO2.p2	2.902	LMO2
PAX2.p2	2.894	PAX2
HAND1,2.p2	2.848	HAND1 HAND2
NANOG{mouse}.p2	2.845	NANOG
AUGGCUU	2.843
STAT2,4,6.p2	2.815	STAT2 STAT4 STAT6
CCAGCAU	2.777
LEF1_TCF7_TCF7L1,2.p2	2.691	TCF7 TCF7L2 LEF1 TCF7L1
AAAGUGC	2.611
GGAAGAC	2.590
MYFfamily.p2	2.473	MYOD1 MYF6 MYF5 MYOG
DBP.p2	2.454	DBP
RUNX1..3.p2	2.395	RUNX1 RUNX3 RUNX2
HMX1.p2	2.391	HMX1
HOX{A5,B5}.p2	2.377	HOXB5 HOXA5
IKZF2.p2	2.371	IKZF2
RXR{A,B,G}.p2	2.284	RXRA RXRB RXRG
HNF4A_NR2F1,2.p2	2.280	NR2F1 NR2F2 HNF4A
EN1,2.p2	2.278	EN1 EN2
NR3C1.p2	2.248	NR3C1
GAGAACU	2.243
SRY.p2	2.198	SRY
CUACAGU	2.065
GAGAUGA	2.061
CACAGUG	2.048
UUGGUCC	2.002
GGCAAGA	1.963
HBP1_HMGB_SSRP1_UBTF.p2	1.876	HMGB2 HMGB3 SSRP1 UBTF HBP1
ZNF423.p2	1.865	ZNF423
ZFP161.p2	1.723	ZFP161
GAGGUAG	1.722
GLI1..3.p2	1.714	GLI1 GLI2 GLI3
UGAAAUG	1.675
NANOG.p2	1.673	NANOG
POU1F1.p2	1.664	POU1F1
CDC5L.p2	1.587	CDC5L
MAZ.p2	1.571	MAZ
AAUACUG	1.555
GAUCAGA	1.472
AGCAGCA	1.469
POU5F1_SOX2{dimer}.p2	1.462	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
NR4A2.p2	1.430	NR4A2
STAT5{A,B}.p2	1.403	STAT5B STAT5A
AGCUGCC	1.397
IKZF1.p2	1.368	IKZF1
GUAAACA	1.307
FOX{F1,F2,J1}.p2	1.293	FOXF2 FOXJ1 FOXF1
GUCAGUU	1.277
UUGGCAC	1.276
UAAGACG	1.256
GATA6.p2	1.255	GATA6
GCUGGUG	1.249
RORA.p2	1.248	RORA
POU2F1..3.p2	1.192	POU2F2 POU2F1 POU2F3
UAUUGCU	1.181
SPZ1.p2	1.163	SPZ1
FOS_FOS{B,L1}_JUN{B,D}.p2	1.110	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
UCACAGU	1.105
CGUGUCU	1.102
AUUGCAC	1.079
PAX4.p2	1.075	PAX4
SNAI1..3.p2	1.074	SNAI2 SNAI1 SNAI3
TLX2.p2	1.044	TLX2
NKX2-1,4.p2	1.040	NKX2-1 NKX2-4
ATF2.p2	1.015	ATF2
TEAD1.p2	0.997	TEAD1 TEAD2 TEAD3 TEAD4
EWSR1-FLI1.p2	0.996	FLI1 EWSR1
CCCUGAG	0.987
PDX1.p2	0.963	PDX1
GFI1.p2	0.958	GFI1
ZEB1.p2	0.940	ZEB1
NFIX.p2	0.915	NFIX
AAGUGCU	0.902
PRRX1,2.p2	0.887	PRRX2 PRRX1
PAX6.p2	0.873	PAX6
AIRE.p2	0.869	AIRE
NFIL3.p2	0.868	NFIL3
PAX3,7.p2	0.862	PAX7 PAX3
ACUGCAU	0.784
NR5A1,2.p2	0.778	NR5A1 NR5A2
FOX{C1,C2}.p2	0.755	FOXC1 FOXC2
HLF.p2	0.753	HLF
AGUGCAA	0.740
ACUGGCC	0.725
UGUGCGU	0.706
LHX3,4.p2	0.694	LHX3 LHX4
UGCAUUG	0.685
ZBTB6.p2	0.673	ZBTB6
ACCCUGU	0.595
ACAUUCA	0.588
HNF1A.p2	0.557	HNF1A
FOX{D1,D2}.p2	0.511	FOXD2 FOXD1
UAAGACU	0.502
CUX2.p2	0.492	CUX2
ETS1,2.p2	0.486	ETS2 ETS1
AAGGUGC	0.477
FOXO1,3,4.p2	0.440	FOXO1 FOXO4 FOXO3
GZF1.p2	0.426	GZF1
AUGACAC	0.421
AACAGUC	0.405
POU3F1..4.p2	0.401	POU3F1 POU3F3 POU3F2 POU3F4
POU6F1.p2	0.377	POU6F1
TFEB.p2	0.365	TFEB
HMGA1,2.p2	0.363	HMGA1 HMGA2
SREBF1,2.p2	0.360	SREBF1 SREBF2
UUGUUCG	0.350
SP1.p2	0.348	SP1
GCAGCAU	0.345
AAUCUCU	0.336
RBPJ.p2	0.335	RBPJ
MYBL2.p2	0.325	MYBL2
NFATC1..3.p2	0.307	NFATC3 NFATC2 NFATC1
PAX8.p2	0.305	PAX8
ZNF238.p2	0.287	ZNF238
AR.p2	0.262	AR
GGACGGA	0.211
NKX3-1.p2	0.201	NKX3-1
MSX1,2.p2	0.191	MSX1 MSX2
EOMES.p2	0.173	EOMES
ZNF384.p2	0.172	ZNF384
GUGCAAA	0.157
CGUACCG	0.143
AACGGAA	0.136
AGCAGCG	0.119
ESRRA.p2	0.084	ESRRA
HOXA9_MEIS1.p2	0.060	MEIS1 HOXA9
CAGUGCA	0.041
AAUCUCA	0.041
RXRA_VDR{dimer}.p2	0.028	VDR	$logo of RXRA_VDR{dimer}.p2$
AGGUAGU	-0.024
CEBPA,B_DDIT3.p2	-0.095	DDIT3 CEBPA CEBPB
ACCCGUA	-0.095
MAFB.p2	-0.124	MAFB
AACACUG	-0.133
TFAP2{A,C}.p2	-0.164	TFAP2C TFAP2A
UGACCUA	-0.222
NR6A1.p2	-0.249	NR6A1
FOXL1.p2	-0.272	FOXL1
NKX6-1,2.p2	-0.275	NKX6-1 NKX6-2
SOX2.p2	-0.290	SOX2
AACCGUU	-0.291
GCUACAU	-0.351
GGAGUGU	-0.400
NFE2.p2	-0.423	NFE2
VSX1,2.p2	-0.457	VSX2 VSX1
AACCUGG	-0.475
HSF1,2.p2	-0.499	HSF1 HSF2
AAUGCCC	-0.509
NFE2L1.p2	-0.529	NFE2L1
FOSL2.p2	-0.542	FOSL2
ADNP_IRX_SIX_ZHX.p2	-0.543	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GAUAUGU	-0.545
ARID5B.p2	-0.592	ARID5B
AGCACCA	-0.663
CCUUCAU	-0.714
HOX{A4,D4}.p2	-0.763	HOXA4 HOXD4
CCAGUGU	-0.776
FOXA2.p3	-0.787	FOXA2
TBP.p2	-0.799	TBP
AGCUUAU	-0.861
T.p2	-0.881	T
DMAP1_NCOR{1,2}_SMARC.p2	-0.942	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
SOX5.p2	-0.945	SOX5
CDX1,2,4.p2	-0.976	CDX1 CDX2 CDX4
GFI1B.p2	-1.097	GFI1B
ESR1.p2	-1.130	ESR1
NKX3-2.p2	-1.155	NKX3-2
GUAACAG	-1.342
UUGGCAA	-1.388
CRX.p2	-1.440	CRX
CTCF.p2	-1.554	CTCF
ONECUT1,2.p2	-1.563	ONECUT2 ONECUT1
PITX1..3.p2	-1.613	PITX2 PITX3 PITX1
GAUUGUC	-1.643
GUAGUGU	-1.662
PRDM1.p3	-1.701	PRDM1
AUGGCAC	-1.705
UCCAGUU	-1.744
AUGUGCC	-1.804
NFE2L2.p2	-1.878	NFE2L2
TFAP2B.p2	-1.911	TFAP2B
HES1.p2	-2.056	HES1
ATF6.p2	-2.073	ATF6
UAAUGCU	-2.135
PPARG.p2	-2.203	PPARG
ACAGUAC	-2.204
NFKB1_REL_RELA.p2	-2.253	RELA REL NFKB1
PAX5.p2	-2.304	PAX5
ZBTB16.p2	-2.384	ZBTB16
IRF1,2,7.p3	-2.424	IRF1 IRF2 IRF7
NKX2-2,8.p2	-2.477	NKX2-2 NKX2-8
ZNF148.p2	-2.524	ZNF148
ACAGUAU	-2.539
AGUGGUU	-2.587
TFAP4.p2	-2.676	TFAP4
UCACAUU	-2.704
PBX1.p2	-2.935	PBX1
FOXN1.p2	-2.955	FOXN1
UCAAGUA	-2.961
FOXQ1.p2	-2.983	FOXQ1
PATZ1.p2	-3.219	PATZ1
ATF5_CREB3.p2	-3.267	ATF5 CREB3
CUUUGGU	-3.285
EP300.p2	-3.321	EP300
SRF.p3	-3.370	SRF
KLF4.p3	-3.459	KLF4
SPIB.p2	-3.462	SPIB
HIF1A.p2	-3.635	HIF1A
TP53.p2	-3.638	TP53
BPTF.p2	-3.707	BPTF
BACH2.p2	-3.766	BACH2
FOXD3.p2	-3.799	FOXD3
AHR_ARNT_ARNT2.p2	-3.867	ARNT AHR ARNT2
SOX17.p2	-3.970	SOX17
bHLH_family.p2	-4.069	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
CREB1.p2	-4.072	CREB1
RXRG_dimer.p3	-4.371	NR1H2 RXRA PPARG PPARA RXRB RXRG
GGAAUGU	-4.420
ATF4.p2	-4.454	ATF4
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.778	ARNT MAX MYC USF1 BHLHB2 ARNT2
SPI1.p2	-6.134	SPI1
EHF.p2	-6.262	EHF
MYB.p2	-6.337	MYB
AAGGCAC	-6.597
XBP1.p3	-6.601	XBP1
TFDP1.p2	-7.207	TFDP1
ZNF143.p2	-7.496	ZNF143
E2F1..5.p2	-7.707	E2F4 E2F5 E2F2 E2F1 E2F3
ELK1,4_GABP{A,B1}.p3	-8.771	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ELF1,2,4.p2	-10.291	ELF2 ELF1 ELF4
NRF1.p2	-10.666	NRF1
NFY{A,B,C}.p2	-11.116	NFYC NFYB NFYA
YY1.p2	-14.003	YY1

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Sample name: Pons

Sorted z-values for every WM.