ISMARA results: PrefrontalCortex

Sample name: PrefrontalCortex

Sorted Z-values histogram for the sample PrefrontalCortex

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	9.091	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	7.836	REST
KLF12.p2	7.617	KLF12
HOX{A6,A7,B6,B7}.p2	7.164	HOXB6 HOXA7 HOXB7 HOXA6
HIC1.p2	7.141	HIC1
GATA1..3.p2	6.943	GATA1 GATA2 GATA3
EGR1..3.p2	6.603	EGR3 EGR1 EGR2
UGUGCUU	6.320
ZFP161.p2	6.008	ZFP161
JUN.p2	5.742	JUN JUND JUNB
GGCAGUG	5.607
TGIF1.p2	5.418	TGIF1
GUGCAAA	5.394
FOX{I1,J2}.p2	5.342	FOXI1 FOXJ2
MZF1.p2	5.256	MZF1
NHLH1,2.p2	5.191	NHLH1 NHLH2
DBP.p2	5.109	DBP
AAUACUG	5.094
ZIC1..3.p2	5.073	ZIC1 ZIC2 ZIC3
MYOD1.p2	5.036	MYOD1
IKZF2.p2	4.956	IKZF2
MAFB.p2	4.670	MAFB
GTF2I.p2	4.489	GTF2I
MTF1.p2	4.300	MTF1
SOX2.p2	4.279	SOX2
ATF2.p2	4.173	ATF2
POU5F1.p2	4.162	POU5F1
PAX4.p2	3.975	PAX4
UGCAUAG	3.933
MAZ.p2	3.929	MAZ
TAL1_TCF{3,4,12}.p2	3.921	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CAGCAGG	3.909
UUGGUCC	3.883
ACAUUCA	3.859
MEF2{A,B,C,D}.p2	3.760	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GCUGGUG	3.754
TCF4_dimer.p2	3.678	TCF4
SRY.p2	3.578	SRY
AUGGCUU	3.571
LMO2.p2	3.530	LMO2
RREB1.p2	3.526	RREB1
GUCAGUU	3.454
GGAAGAC	3.401
PAX2.p2	3.263	PAX2
CTCF.p2	3.231	CTCF
ESRRA.p2	3.164	ESRRA
TFEB.p2	3.128	TFEB
GGCUCAG	3.078
ZBTB6.p2	3.038	ZBTB6
AUUGCAC	2.999
STAT2,4,6.p2	2.970	STAT2 STAT4 STAT6
SPZ1.p2	2.925	SPZ1
HOX{A5,B5}.p2	2.729	HOXB5 HOXA5
TFCP2.p2	2.692	TFCP2
AGUGCAA	2.678
TBX4,5.p2	2.657	TBX5 TBX4
FOXO1,3,4.p2	2.548	FOXO1 FOXO4 FOXO3
EWSR1-FLI1.p2	2.344	FLI1 EWSR1
SP1.p2	2.338	SP1
TLX1..3_NFIC{dimer}.p2	2.221	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
FOX{D1,D2}.p2	2.205	FOXD2 FOXD1
ALX1.p2	2.149	ALX1
GCUACAU	2.085
GGCAAGA	2.050
CUCCCAA	2.040
SOX{8,9,10}.p2	1.946	SOX9 SOX8 SOX10
UAAGACG	1.904
UUGGCAC	1.880
FEV.p2	1.839	FEV
RXRA_VDR{dimer}.p2	1.819	VDR	$logo of RXRA_VDR{dimer}.p2$
NKX2-3_NKX2-5.p2	1.818	NKX2-5 NKX2-3
CCAGCAU	1.806
SREBF1,2.p2	1.723	SREBF1 SREBF2
TFAP2B.p2	1.656	TFAP2B
GUAAACA	1.636
EVI1.p2	1.571	EVI1
FOXP3.p2	1.524	FOXP3
HBP1_HMGB_SSRP1_UBTF.p2	1.518	HMGB2 HMGB3 SSRP1 UBTF HBP1
ESR1.p2	1.496	ESR1
CAGUGCA	1.478
AGCAGCA	1.477
EBF1.p2	1.471	EBF1
UCACAGU	1.459
SMAD1..7,9.p2	1.448	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
RXR{A,B,G}.p2	1.448	RXRA RXRB RXRG
GAUCAGA	1.445
AAAGUGC	1.370
NFIX.p2	1.345	NFIX
NR3C1.p2	1.318	NR3C1
AAGUGCU	1.305
AACAGUC	1.293
AUGGCAC	1.290
CDC5L.p2	1.266	CDC5L
GFI1.p2	1.260	GFI1
NFIL3.p2	1.229	NFIL3
GFI1B.p2	1.186	GFI1B
HMX1.p2	1.185	HMX1
PRRX1,2.p2	1.154	PRRX2 PRRX1
NR5A1,2.p2	1.125	NR5A1 NR5A2
AAGGUGC	1.121
UAUUGCU	1.101
NFE2L1.p2	1.070	NFE2L1
CUACAGU	1.063
CUX2.p2	1.020	CUX2
HMGA1,2.p2	0.963	HMGA1 HMGA2
IKZF1.p2	0.959	IKZF1
GAGAACU	0.934
HAND1,2.p2	0.925	HAND1 HAND2
UGUGCGU	0.859
PAX3,7.p2	0.836	PAX7 PAX3
UCCCUUU	0.827
AGCUUAU	0.764
NKX6-1,2.p2	0.758	NKX6-1 NKX6-2
UAAGACU	0.721
PBX1.p2	0.708	PBX1
AGCAGCG	0.707
NKX2-2,8.p2	0.626	NKX2-2 NKX2-8
GGACGGA	0.626
LHX3,4.p2	0.607	LHX3 LHX4
AGCUGCC	0.574
NFE2.p2	0.568	NFE2
POU5F1_SOX2{dimer}.p2	0.554	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GGAAUGU	0.538
FOX{F1,F2,J1}.p2	0.486	FOXF2 FOXJ1 FOXF1
FOXL1.p2	0.459	FOXL1
FOXN1.p2	0.453	FOXN1
CDX1,2,4.p2	0.449	CDX1 CDX2 CDX4
GZF1.p2	0.447	GZF1
ACUGCAU	0.427
RORA.p2	0.398	RORA
NR4A2.p2	0.367	NR4A2
STAT1,3.p3	0.343	STAT1 STAT3
POU6F1.p2	0.339	POU6F1
NR6A1.p2	0.333	NR6A1
UUGGCAA	0.326
CGUGUCU	0.323
AACACUG	0.288
ATF4.p2	0.277	ATF4
GCAGCAU	0.275
GTF2A1,2.p2	0.221	GTF2A1 GTF2A2
GAGAUGA	0.220
NR1H4.p2	0.215	NR1H4
AUGACAC	0.204
LEF1_TCF7_TCF7L1,2.p2	0.197	TCF7 TCF7L2 LEF1 TCF7L1
FOS_FOS{B,L1}_JUN{B,D}.p2	0.196	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
CEBPA,B_DDIT3.p2	0.167	DDIT3 CEBPA CEBPB
POU3F1..4.p2	0.162	POU3F1 POU3F3 POU3F2 POU3F4
NFATC1..3.p2	0.160	NFATC3 NFATC2 NFATC1
SOX5.p2	0.114	SOX5
PAX6.p2	0.106	PAX6
AGUGGUU	0.058
AACCGUU	0.035
GAUAUGU	0.025
GLI1..3.p2	0.014	GLI1 GLI2 GLI3
NKX3-1.p2	0.003	NKX3-1
UGCAUUG	-0.038
UUUUUGC	-0.039
PAX8.p2	-0.050	PAX8
CGUACCG	-0.054
NKX3-2.p2	-0.056	NKX3-2
ACUGGCC	-0.064
UGAAAUG	-0.080
ACCCGUA	-0.096
NKX2-1,4.p2	-0.120	NKX2-1 NKX2-4
EOMES.p2	-0.131	EOMES
ARID5B.p2	-0.142	ARID5B
AR.p2	-0.155	AR
TEAD1.p2	-0.189	TEAD1 TEAD2 TEAD3 TEAD4
AGGUAGU	-0.225
AACCUGG	-0.254
GUAGUGU	-0.261
CACAGUG	-0.272
PDX1.p2	-0.289	PDX1
ZNF148.p2	-0.315	ZNF148
SNAI1..3.p2	-0.322	SNAI2 SNAI1 SNAI3
UGACCUA	-0.332
AAUCUCU	-0.360
STAT5{A,B}.p2	-0.375	STAT5B STAT5A
HSF1,2.p2	-0.401	HSF1 HSF2
AIRE.p2	-0.416	AIRE
EN1,2.p2	-0.421	EN1 EN2
UUGUUCG	-0.472
AACGGAA	-0.497
VSX1,2.p2	-0.498	VSX2 VSX1
GGAGUGU	-0.516
UCCAGUU	-0.535
AAUCUCA	-0.560
PAX5.p2	-0.578	PAX5
TLX2.p2	-0.583	TLX2
AAUGCCC	-0.601
HOXA9_MEIS1.p2	-0.605	MEIS1 HOXA9
T.p2	-0.606	T
TFAP2{A,C}.p2	-0.634	TFAP2C TFAP2A
RXRG_dimer.p3	-0.657	NR1H2 RXRA PPARG PPARA RXRB RXRG
MYFfamily.p2	-0.665	MYOD1 MYF6 MYF5 MYOG
GUAACAG	-0.720
PRDM1.p3	-0.726	PRDM1
NANOG.p2	-0.823	NANOG
MSX1,2.p2	-0.832	MSX1 MSX2
CCUUCAU	-0.881
RUNX1..3.p2	-0.897	RUNX1 RUNX3 RUNX2
HOX{A4,D4}.p2	-0.904	HOXA4 HOXD4
NRF1.p2	-0.922	NRF1
MYBL2.p2	-0.983	MYBL2
FOSL2.p2	-1.001	FOSL2
HES1.p2	-1.042	HES1
UCACAUU	-1.098
ZNF384.p2	-1.102	ZNF384
HNF4A_NR2F1,2.p2	-1.114	NR2F1 NR2F2 HNF4A
ETS1,2.p2	-1.116	ETS2 ETS1
ACCCUGU	-1.117
POU1F1.p2	-1.119	POU1F1
CRX.p2	-1.139	CRX
NANOG{mouse}.p2	-1.147	NANOG
ZNF423.p2	-1.148	ZNF423
HIF1A.p2	-1.182	HIF1A
ATF5_CREB3.p2	-1.211	ATF5 CREB3
ACAGUAC	-1.251
NFE2L2.p2	-1.259	NFE2L2
HLF.p2	-1.326	HLF
ZEB1.p2	-1.359	ZEB1
ZNF143.p2	-1.370	ZNF143
RBPJ.p2	-1.394	RBPJ
FOX{C1,C2}.p2	-1.415	FOXC1 FOXC2
SPIB.p2	-1.615	SPIB
FOXQ1.p2	-1.678	FOXQ1
AUGUGCC	-1.683
PPARG.p2	-1.719	PPARG
ONECUT1,2.p2	-1.730	ONECUT2 ONECUT1
GAUUGUC	-1.733
CCAGUGU	-1.844
ADNP_IRX_SIX_ZHX.p2	-2.061	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
KLF4.p3	-2.168	KLF4
BACH2.p2	-2.238	BACH2
CCCUGAG	-2.432
TFAP4.p2	-2.437	TFAP4
CREB1.p2	-2.441	CREB1
ACAGUAU	-2.452
TBP.p2	-2.493	TBP
ATF6.p2	-2.578	ATF6
UAAUGCU	-2.657
DMAP1_NCOR{1,2}_SMARC.p2	-2.751	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
PATZ1.p2	-2.761	PATZ1
EHF.p2	-2.810	EHF
BPTF.p2	-2.829	BPTF
TP53.p2	-2.866	TP53
AHR_ARNT_ARNT2.p2	-3.121	ARNT AHR ARNT2
GAGGUAG	-3.132
UCAAGUA	-3.188
ZNF238.p2	-3.265	ZNF238
AGCACCA	-3.268
CUUUGGU	-3.293
HNF1A.p2	-3.355	HNF1A
IRF1,2,7.p3	-3.453	IRF1 IRF2 IRF7
PITX1..3.p2	-3.508	PITX2 PITX3 PITX1
bHLH_family.p2	-3.563	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
FOXD3.p2	-3.630	FOXD3
ZBTB16.p2	-3.658	ZBTB16
GATA6.p2	-3.746	GATA6
SOX17.p2	-3.746	SOX17
FOXA2.p3	-4.092	FOXA2
POU2F1..3.p2	-4.314	POU2F2 POU2F1 POU2F3
ELK1,4_GABP{A,B1}.p3	-4.362	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
SRF.p3	-4.908	SRF
MYB.p2	-4.914	MYB
XBP1.p3	-4.954	XBP1
NFKB1_REL_RELA.p2	-5.019	RELA REL NFKB1
EP300.p2	-5.152	EP300
NFY{A,B,C}.p2	-5.572	NFYC NFYB NFYA
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-5.950	ARNT MAX MYC USF1 BHLHB2 ARNT2
SPI1.p2	-6.057	SPI1
AAGGCAC	-6.181
YY1.p2	-6.417	YY1
TFDP1.p2	-6.554	TFDP1
ELF1,2,4.p2	-7.652	ELF2 ELF1 ELF4
E2F1..5.p2	-8.724	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: PrefrontalCortex

Sorted z-values for every WM.