ISMARA results: SmoothMuscle

Sample name: SmoothMuscle

Sorted Z-values histogram for the sample SmoothMuscle

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
XBP1.p3	17.754	XBP1
TBP.p2	8.543	TBP
ATF6.p2	6.560	ATF6
ZNF238.p2	6.334	ZNF238
TEAD1.p2	5.827	TEAD1 TEAD2 TEAD3 TEAD4
TFAP2{A,C}.p2	5.717	TFAP2C TFAP2A
KLF4.p3	5.675	KLF4
SRF.p3	5.474	SRF
MYFfamily.p2	4.893	MYOD1 MYF6 MYF5 MYOG
AGCACCA	4.506
NR6A1.p2	4.261	NR6A1
STAT1,3.p3	3.976	STAT1 STAT3
AGUGGUU	3.970
AAUACUG	3.938
TLX1..3_NFIC{dimer}.p2	3.904	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
UCCAGUU	3.712
GGAAUGU	3.568
SPIB.p2	3.439	SPIB
ELF1,2,4.p2	3.415	ELF2 ELF1 ELF4
HIF1A.p2	3.369	HIF1A
AHR_ARNT_ARNT2.p2	3.203	ARNT AHR ARNT2
CUUUGGU	3.172
TFAP4.p2	2.970	TFAP4
AAGGCAC	2.959
MZF1.p2	2.783	MZF1
NFE2L1.p2	2.760	NFE2L1
GATA1..3.p2	2.651	GATA1 GATA2 GATA3
NKX3-2.p2	2.487	NKX3-2
ZNF148.p2	2.406	ZNF148
GUAAACA	2.321
ACAGUAU	2.297
UCAAGUA	2.294
TP53.p2	2.268	TP53
HBP1_HMGB_SSRP1_UBTF.p2	2.211	HMGB2 HMGB3 SSRP1 UBTF HBP1
CEBPA,B_DDIT3.p2	2.191	DDIT3 CEBPA CEBPB
NFE2.p2	2.168	NFE2
UCACAUU	2.161
RXR{A,B,G}.p2	2.152	RXRA RXRB RXRG
AACGGAA	2.120
AAGGUGC	2.106
FOS_FOS{B,L1}_JUN{B,D}.p2	2.096	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
GUGCAAA	1.986
ZNF384.p2	1.886	ZNF384
PRDM1.p3	1.884	PRDM1
FOXQ1.p2	1.864	FOXQ1
HOX{A6,A7,B6,B7}.p2	1.858	HOXB6 HOXA7 HOXB7 HOXA6
ZBTB6.p2	1.823	ZBTB6
AUUGCAC	1.819
FEV.p2	1.781	FEV
AAUGCCC	1.774
HIC1.p2	1.774	HIC1
MTF1.p2	1.727	MTF1
CDC5L.p2	1.725	CDC5L
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.651	ARNT MAX MYC USF1 BHLHB2 ARNT2
NFKB1_REL_RELA.p2	1.631	RELA REL NFKB1
GTF2I.p2	1.587	GTF2I
IKZF2.p2	1.567	IKZF2
MYBL2.p2	1.485	MYBL2
POU5F1_SOX2{dimer}.p2	1.417	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GCAGCAU	1.389
CDX1,2,4.p2	1.387	CDX1 CDX2 CDX4
BACH2.p2	1.382	BACH2
EP300.p2	1.294	EP300
NFE2L2.p2	1.291	NFE2L2
PRRX1,2.p2	1.231	PRRX2 PRRX1
FOSL2.p2	1.091	FOSL2
TLX2.p2	1.085	TLX2
CACAGUG	1.063
UGAAAUG	1.062
CTCF.p2	1.049	CTCF
UUGGUCC	1.045
NFIX.p2	1.035	NFIX
STAT2,4,6.p2	1.016	STAT2 STAT4 STAT6
AUGACAC	0.965
PATZ1.p2	0.872	PATZ1
HLF.p2	0.839	HLF
ADNP_IRX_SIX_ZHX.p2	0.837	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GUAGUGU	0.827
FOXL1.p2	0.822	FOXL1
POU3F1..4.p2	0.798	POU3F1 POU3F3 POU3F2 POU3F4
MSX1,2.p2	0.760	MSX1 MSX2
CGUACCG	0.730
TFCP2.p2	0.702	TFCP2
GAGAACU	0.691
NHLH1,2.p2	0.685	NHLH1 NHLH2
PDX1.p2	0.670	PDX1
HNF1A.p2	0.663	HNF1A
T.p2	0.645	T
ESR1.p2	0.618	ESR1
GGCAAGA	0.618
SOX17.p2	0.609	SOX17
AAAGUGC	0.609
UUGGCAC	0.586
ZNF423.p2	0.562	ZNF423
AGGUAGU	0.562
JUN.p2	0.552	JUN JUND JUNB
HMGA1,2.p2	0.539	HMGA1 HMGA2
ACAGUAC	0.536
TFEB.p2	0.531	TFEB
RREB1.p2	0.506	RREB1
LEF1_TCF7_TCF7L1,2.p2	0.487	TCF7 TCF7L2 LEF1 TCF7L1
UAAUGCU	0.478
TCF4_dimer.p2	0.442	TCF4
SOX{8,9,10}.p2	0.424	SOX9 SOX8 SOX10
CCAGUGU	0.408
GFI1.p2	0.393	GFI1
UAAGACG	0.392
EHF.p2	0.367	EHF
TFAP2B.p2	0.355	TFAP2B
CUACAGU	0.330
AACCGUU	0.286
NANOG{mouse}.p2	0.264	NANOG
FOX{F1,F2,J1}.p2	0.217	FOXF2 FOXJ1 FOXF1
NFATC1..3.p2	0.212	NFATC3 NFATC2 NFATC1
AGCAGCG	0.208
ACCCUGU	0.199
POU6F1.p2	0.197	POU6F1
PAX8.p2	0.192	PAX8
EOMES.p2	0.143	EOMES
ATF2.p2	0.136	ATF2
UGACCUA	0.128
GAUAUGU	0.124
GGAGUGU	0.115
HSF1,2.p2	0.094	HSF1 HSF2
GFI1B.p2	0.065	GFI1B
ARID5B.p2	0.051	ARID5B
GGACGGA	0.026
HAND1,2.p2	0.025	HAND1 HAND2
GZF1.p2	0.019	GZF1
PAX6.p2	0.013	PAX6
VSX1,2.p2	0.003	VSX2 VSX1
ATF5_CREB3.p2	0.002	ATF5 CREB3
FOXD3.p2	-0.003	FOXD3
AAUCUCU	-0.008
ACCCGUA	-0.030
FOX{C1,C2}.p2	-0.031	FOXC1 FOXC2
UCCCUUU	-0.043
GTF2A1,2.p2	-0.049	GTF2A1 GTF2A2
ETS1,2.p2	-0.066	ETS2 ETS1
GATA6.p2	-0.070	GATA6
CGUGUCU	-0.094
PAX3,7.p2	-0.111	PAX7 PAX3
CCAGCAU	-0.141
UAAGACU	-0.144
GAGAUGA	-0.151
SREBF1,2.p2	-0.154	SREBF1 SREBF2
UGCAUUG	-0.173
BPTF.p2	-0.181	BPTF
ESRRA.p2	-0.217	ESRRA
EVI1.p2	-0.289	EVI1
AAUCUCA	-0.306
NKX6-1,2.p2	-0.318	NKX6-1 NKX6-2
GCUGGUG	-0.337
UUGUUCG	-0.339
GAGGUAG	-0.349
HNF4A_NR2F1,2.p2	-0.385	NR2F1 NR2F2 HNF4A
PPARG.p2	-0.387	PPARG
SRY.p2	-0.439	SRY
PAX5.p2	-0.455	PAX5
GUAACAG	-0.480
CRX.p2	-0.505	CRX
FOXO1,3,4.p2	-0.562	FOXO1 FOXO4 FOXO3
SPZ1.p2	-0.570	SPZ1
ZBTB16.p2	-0.577	ZBTB16
TAL1_TCF{3,4,12}.p2	-0.583	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GLI1..3.p2	-0.583	GLI1 GLI2 GLI3
AACCUGG	-0.589
NR3C1.p2	-0.591	NR3C1
UGUGCGU	-0.597
GAUCAGA	-0.630
EGR1..3.p2	-0.639	EGR3 EGR1 EGR2
AACACUG	-0.646
TFDP1.p2	-0.668	TFDP1
ZIC1..3.p2	-0.712	ZIC1 ZIC2 ZIC3
DMAP1_NCOR{1,2}_SMARC.p2	-0.713	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
FOX{I1,J2}.p2	-0.727	FOXI1 FOXJ2
AUGUGCC	-0.728
ACUGCAU	-0.768
AGCUGCC	-0.837
ACUGGCC	-0.875
NANOG.p2	-0.877	NANOG
EWSR1-FLI1.p2	-0.905	FLI1 EWSR1
HMX1.p2	-0.906	HMX1
STAT5{A,B}.p2	-0.919	STAT5B STAT5A
AGCAGCA	-0.951
HOX{A5,B5}.p2	-0.976	HOXB5 HOXA5
CCUUCAU	-0.992
HOX{A4,D4}.p2	-0.994	HOXA4 HOXD4
CUX2.p2	-0.997	CUX2
SP1.p2	-0.997	SP1
RXRG_dimer.p3	-1.018	NR1H2 RXRA PPARG PPARA RXRB RXRG
HOXA9_MEIS1.p2	-1.066	MEIS1 HOXA9
NFIL3.p2	-1.072	NFIL3
AUGGCAC	-1.077
GUCAGUU	-1.082
NKX2-3_NKX2-5.p2	-1.110	NKX2-5 NKX2-3
GGAAGAC	-1.114
SPI1.p2	-1.116	SPI1
RBPJ.p2	-1.142	RBPJ
UCACAGU	-1.206
PAX4.p2	-1.251	PAX4
PBX1.p2	-1.265	PBX1
NR5A1,2.p2	-1.272	NR5A1 NR5A2
YY1.p2	-1.302	YY1
AR.p2	-1.378	AR
GAUUGUC	-1.389
UGCAUAG	-1.394
IRF1,2,7.p3	-1.488	IRF1 IRF2 IRF7
PITX1..3.p2	-1.508	PITX2 PITX3 PITX1
AIRE.p2	-1.535	AIRE
POU1F1.p2	-1.592	POU1F1
UUGGCAA	-1.595
GGCUCAG	-1.600
SOX2.p2	-1.638	SOX2
CAGUGCA	-1.686
RORA.p2	-1.701	RORA
FOX{D1,D2}.p2	-1.705	FOXD2 FOXD1
LHX3,4.p2	-1.726	LHX3 LHX4
NKX2-2,8.p2	-1.731	NKX2-2 NKX2-8
DBP.p2	-1.761	DBP
RFX1..5_RFXANK_RFXAP.p2	-1.817	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
IKZF1.p2	-1.826	IKZF1
FOXA2.p3	-1.836	FOXA2
MAZ.p2	-1.846	MAZ
CAGCAGG	-1.868
CCCUGAG	-1.869
AGCUUAU	-1.893
NKX3-1.p2	-1.894	NKX3-1
LMO2.p2	-1.925	LMO2
NR1H4.p2	-1.932	NR1H4
RXRA_VDR{dimer}.p2	-1.943	VDR	$logo of RXRA_VDR{dimer}.p2$
ELK1,4_GABP{A,B1}.p3	-1.959	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
FOXP3.p2	-1.983	FOXP3
SOX5.p2	-2.012	SOX5
AACAGUC	-2.062
ONECUT1,2.p2	-2.126	ONECUT2 ONECUT1
bHLH_family.p2	-2.137	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
KLF12.p2	-2.195	KLF12
SMAD1..7,9.p2	-2.249	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
MAFB.p2	-2.251	MAFB
EBF1.p2	-2.280	EBF1
POU5F1.p2	-2.380	POU5F1
ATF4.p2	-2.446	ATF4
CREB1.p2	-2.664	CREB1
FOXN1.p2	-2.683	FOXN1
HES1.p2	-2.704	HES1
GCUACAU	-2.728
AAGUGCU	-2.731
REST.p3	-2.776	REST
NKX2-1,4.p2	-2.811	NKX2-1 NKX2-4
TBX4,5.p2	-2.828	TBX5 TBX4
ZEB1.p2	-2.835	ZEB1
GGCAGUG	-2.882
AUGGCUU	-3.004
EN1,2.p2	-3.008	EN1 EN2
ALX1.p2	-3.047	ALX1
ZFP161.p2	-3.066	ZFP161
RUNX1..3.p2	-3.069	RUNX1 RUNX3 RUNX2
AGUGCAA	-3.079
NRF1.p2	-3.115	NRF1
UGUGCUU	-3.320
POU2F1..3.p2	-3.327	POU2F2 POU2F1 POU2F3
MYOD1.p2	-3.328	MYOD1
NR4A2.p2	-3.552	NR4A2
CUCCCAA	-3.745
ACAUUCA	-3.800
UAUUGCU	-3.814
MEF2{A,B,C,D}.p2	-3.877	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TGIF1.p2	-3.891	TGIF1
UUUUUGC	-4.397
PAX2.p2	-4.841	PAX2
ZNF143.p2	-5.429	ZNF143
SNAI1..3.p2	-5.518	SNAI2 SNAI1 SNAI3
NFY{A,B,C}.p2	-5.925	NFYC NFYB NFYA
MYB.p2	-6.512	MYB
E2F1..5.p2	-14.194	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: SmoothMuscle

Sorted z-values for every WM.