ISMARA results: Thyroid

Sample name: Thyroid

Sorted Z-values histogram for the sample Thyroid

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
MEF2{A,B,C,D}.p2	7.351	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NFIX.p2	6.244	NFIX
TBP.p2	6.034	TBP
SRF.p3	4.769	SRF
ESR1.p2	4.556	ESR1
AAGGCAC	4.347
MYFfamily.p2	4.116	MYOD1 MYF6 MYF5 MYOG
NR5A1,2.p2	3.928	NR5A1 NR5A2
SNAI1..3.p2	3.841	SNAI2 SNAI1 SNAI3
AR.p2	3.788	AR
FOXA2.p3	3.541	FOXA2
TFAP2{A,C}.p2	3.531	TFAP2C TFAP2A
TCF4_dimer.p2	3.328	TCF4
TLX1..3_NFIC{dimer}.p2	3.296	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
POU2F1..3.p2	3.273	POU2F2 POU2F1 POU2F3
ACAGUAU	3.222
SREBF1,2.p2	3.154	SREBF1 SREBF2
MTF1.p2	3.122	MTF1
POU6F1.p2	3.112	POU6F1
TFAP4.p2	3.110	TFAP4
TEAD1.p2	3.039	TEAD1 TEAD2 TEAD3 TEAD4
SP1.p2	3.017	SP1
CCAGUGU	2.975
UCCAGUU	2.974
HBP1_HMGB_SSRP1_UBTF.p2	2.942	HMGB2 HMGB3 SSRP1 UBTF HBP1
GUAGUGU	2.915
MAZ.p2	2.881	MAZ
NKX6-1,2.p2	2.750	NKX6-1 NKX6-2
DBP.p2	2.710	DBP
CREB1.p2	2.636	CREB1
FOSL2.p2	2.453	FOSL2
MYOD1.p2	2.275	MYOD1
CUUUGGU	2.255
GGAAUGU	2.199
PRDM1.p3	2.110	PRDM1
CDC5L.p2	2.090	CDC5L
NR4A2.p2	2.082	NR4A2
NHLH1,2.p2	2.072	NHLH1 NHLH2
AGCUUAU	2.010
NKX2-1,4.p2	1.975	NKX2-1 NKX2-4
PAX2.p2	1.962	PAX2
POU5F1.p2	1.901	POU5F1
HSF1,2.p2	1.899	HSF1 HSF2
FOXO1,3,4.p2	1.899	FOXO1 FOXO4 FOXO3
PPARG.p2	1.891	PPARG
TGIF1.p2	1.834	TGIF1
CDX1,2,4.p2	1.833	CDX1 CDX2 CDX4
SMAD1..7,9.p2	1.807	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TP53.p2	1.762	TP53
ATF2.p2	1.749	ATF2
AGUGCAA	1.746
ATF6.p2	1.741	ATF6
AUGGCAC	1.705
TFEB.p2	1.705	TFEB
FOX{D1,D2}.p2	1.663	FOXD2 FOXD1
CRX.p2	1.569	CRX
ZNF423.p2	1.566	ZNF423
ACAGUAC	1.491
TFCP2.p2	1.430	TFCP2
HOX{A5,B5}.p2	1.421	HOXB5 HOXA5
RFX1..5_RFXANK_RFXAP.p2	1.389	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
RORA.p2	1.358	RORA
BACH2.p2	1.348	BACH2
HMGA1,2.p2	1.342	HMGA1 HMGA2
ZBTB6.p2	1.318	ZBTB6
TFAP2B.p2	1.235	TFAP2B
NFATC1..3.p2	1.206	NFATC3 NFATC2 NFATC1
EVI1.p2	1.167	EVI1
NR3C1.p2	1.141	NR3C1
VSX1,2.p2	1.136	VSX2 VSX1
ONECUT1,2.p2	1.125	ONECUT2 ONECUT1
HIC1.p2	1.106	HIC1
HIF1A.p2	1.086	HIF1A
IKZF2.p2	1.082	IKZF2
XBP1.p3	1.079	XBP1
UAAUGCU	1.078
AAGGUGC	1.065
ETS1,2.p2	1.057	ETS2 ETS1
HOX{A6,A7,B6,B7}.p2	1.036	HOXB6 HOXA7 HOXB7 HOXA6
FOX{C1,C2}.p2	1.035	FOXC1 FOXC2
UUGGCAA	1.026
AUGUGCC	1.022
ZNF384.p2	1.012	ZNF384
RXRG_dimer.p3	0.997	NR1H2 RXRA PPARG PPARA RXRB RXRG
AAGUGCU	0.953
EP300.p2	0.933	EP300
GLI1..3.p2	0.923	GLI1 GLI2 GLI3
FOXN1.p2	0.896	FOXN1
EOMES.p2	0.867	EOMES
NR1H4.p2	0.851	NR1H4
AAUGCCC	0.850
MSX1,2.p2	0.826	MSX1 MSX2
UGAAAUG	0.789
GCUACAU	0.778
LEF1_TCF7_TCF7L1,2.p2	0.770	TCF7 TCF7L2 LEF1 TCF7L1
NR6A1.p2	0.766	NR6A1
AGUGGUU	0.761
HOX{A4,D4}.p2	0.760	HOXA4 HOXD4
CCAGCAU	0.722
TLX2.p2	0.662	TLX2
FOS_FOS{B,L1}_JUN{B,D}.p2	0.654	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
GFI1B.p2	0.652	GFI1B
GGACGGA	0.652
HNF4A_NR2F1,2.p2	0.645	NR2F1 NR2F2 HNF4A
UUGUUCG	0.632
UAAGACU	0.611
NANOG{mouse}.p2	0.604	NANOG
HLF.p2	0.601	HLF
ATF4.p2	0.590	ATF4
CGUACCG	0.585
AUUGCAC	0.585
RXRA_VDR{dimer}.p2	0.545	VDR	$logo of RXRA_VDR{dimer}.p2$
ZEB1.p2	0.508	ZEB1
MAFB.p2	0.466	MAFB
ZFP161.p2	0.454	ZFP161
BPTF.p2	0.448	BPTF
EGR1..3.p2	0.418	EGR3 EGR1 EGR2
HAND1,2.p2	0.413	HAND1 HAND2
ACAUUCA	0.406
EN1,2.p2	0.388	EN1 EN2
EWSR1-FLI1.p2	0.381	FLI1 EWSR1
KLF12.p2	0.348	KLF12
FOXL1.p2	0.346	FOXL1
CCUUCAU	0.301
GAUCAGA	0.293
UGCAUAG	0.283
GTF2A1,2.p2	0.272	GTF2A1 GTF2A2
AAAGUGC	0.262
SPZ1.p2	0.205	SPZ1
STAT5{A,B}.p2	0.175	STAT5B STAT5A
CTCF.p2	0.174	CTCF
UUGGCAC	0.153
UAUUGCU	0.150
UAAGACG	0.144
ACUGGCC	0.140
FOX{I1,J2}.p2	0.122	FOXI1 FOXJ2
PAX8.p2	0.104	PAX8
AGCAGCG	0.084
HOXA9_MEIS1.p2	0.082	MEIS1 HOXA9
UUUUUGC	0.061
EHF.p2	0.059	EHF
SOX5.p2	0.055	SOX5
PAX5.p2	0.037	PAX5
ACCCGUA	0.034
POU1F1.p2	0.033	POU1F1
NKX3-2.p2	0.014	NKX3-2
TBX4,5.p2	0.007	TBX5 TBX4
AACCUGG	0.004
AAUACUG	-0.018
PAX3,7.p2	-0.049	PAX7 PAX3
UGUGCGU	-0.052
AAUCUCU	-0.064
ARID5B.p2	-0.082	ARID5B
AACCGUU	-0.084
SRY.p2	-0.149	SRY
FOX{F1,F2,J1}.p2	-0.151	FOXF2 FOXJ1 FOXF1
GZF1.p2	-0.172	GZF1
GAUUGUC	-0.186
PATZ1.p2	-0.216	PATZ1
ACUGCAU	-0.217
PRRX1,2.p2	-0.230	PRRX2 PRRX1
NFY{A,B,C}.p2	-0.240	NFYC NFYB NFYA
GAUAUGU	-0.245
GUGCAAA	-0.249
AUGACAC	-0.255
AIRE.p2	-0.282	AIRE
AAUCUCA	-0.298
CEBPA,B_DDIT3.p2	-0.336	DDIT3 CEBPA CEBPB
POU3F1..4.p2	-0.345	POU3F1 POU3F3 POU3F2 POU3F4
AGCAGCA	-0.349
NFKB1_REL_RELA.p2	-0.351	RELA REL NFKB1
GGAGUGU	-0.384
GUCAGUU	-0.387
NANOG.p2	-0.394	NANOG
GAGAACU	-0.395
GAGAUGA	-0.402
GGCAAGA	-0.428
GATA1..3.p2	-0.435	GATA1 GATA2 GATA3
STAT2,4,6.p2	-0.466	STAT2 STAT4 STAT6
CGUGUCU	-0.468
STAT1,3.p3	-0.499	STAT1 STAT3
UGACCUA	-0.500
ZNF238.p2	-0.526	ZNF238
FOXP3.p2	-0.543	FOXP3
PAX4.p2	-0.552	PAX4
CACAGUG	-0.558
CAGUGCA	-0.559
RXR{A,B,G}.p2	-0.565	RXRA RXRB RXRG
KLF4.p3	-0.598	KLF4
T.p2	-0.637	T
ALX1.p2	-0.649	ALX1
UUGGUCC	-0.716
CUCCCAA	-0.741
POU5F1_SOX2{dimer}.p2	-0.768	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOXD3.p2	-0.770	FOXD3
NKX3-1.p2	-0.779	NKX3-1
SOX2.p2	-0.794	SOX2
AACGGAA	-0.824
ACCCUGU	-0.840
HNF1A.p2	-0.857	HNF1A
GUAACAG	-0.859
PBX1.p2	-0.871	PBX1
AHR_ARNT_ARNT2.p2	-0.872	ARNT AHR ARNT2
UGCAUUG	-0.877
MZF1.p2	-0.888	MZF1
CAGCAGG	-0.891
GGCAGUG	-0.896
PAX6.p2	-0.900	PAX6
GATA6.p2	-0.907	GATA6
GCUGGUG	-0.915
AGGUAGU	-0.929
MYBL2.p2	-0.992	MYBL2
DMAP1_NCOR{1,2}_SMARC.p2	-1.005	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GFI1.p2	-1.026	GFI1
ZNF148.p2	-1.118	ZNF148
CUACAGU	-1.131
RBPJ.p2	-1.166	RBPJ
UCCCUUU	-1.180
TAL1_TCF{3,4,12}.p2	-1.181	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
IKZF1.p2	-1.197	IKZF1
LMO2.p2	-1.201	LMO2
NFIL3.p2	-1.201	NFIL3
NRF1.p2	-1.210	NRF1
SOX{8,9,10}.p2	-1.223	SOX9 SOX8 SOX10
UCACAUU	-1.255
RREB1.p2	-1.306	RREB1
YY1.p2	-1.334	YY1
JUN.p2	-1.381	JUN JUND JUNB
CUX2.p2	-1.416	CUX2
HMX1.p2	-1.455	HMX1
PDX1.p2	-1.543	PDX1
ATF5_CREB3.p2	-1.558	ATF5 CREB3
FOXQ1.p2	-1.620	FOXQ1
RUNX1..3.p2	-1.747	RUNX1 RUNX3 RUNX2
EBF1.p2	-1.762	EBF1
UCACAGU	-1.791
AACACUG	-1.842
NKX2-3_NKX2-5.p2	-1.844	NKX2-5 NKX2-3
ELK1,4_GABP{A,B1}.p3	-1.872	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ELF1,2,4.p2	-1.887	ELF2 ELF1 ELF4
AUGGCUU	-1.959
GGAAGAC	-1.986
GAGGUAG	-2.099
SOX17.p2	-2.173	SOX17
NFE2L2.p2	-2.178	NFE2L2
NKX2-2,8.p2	-2.339	NKX2-2 NKX2-8
UGUGCUU	-2.441
REST.p3	-2.530	REST
NFE2L1.p2	-2.687	NFE2L1
LHX3,4.p2	-2.726	LHX3 LHX4
ADNP_IRX_SIX_ZHX.p2	-2.826	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GTF2I.p2	-2.828	GTF2I
ZBTB16.p2	-2.929	ZBTB16
AACAGUC	-2.954
CCCUGAG	-3.026
GCAGCAU	-3.086
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.112	ARNT MAX MYC USF1 BHLHB2 ARNT2
ZIC1..3.p2	-3.146	ZIC1 ZIC2 ZIC3
SPIB.p2	-3.198	SPIB
ESRRA.p2	-3.261	ESRRA
HES1.p2	-3.324	HES1
FEV.p2	-3.594	FEV
SPI1.p2	-3.624	SPI1
AGCACCA	-3.636
GGCUCAG	-3.683
IRF1,2,7.p3	-3.765	IRF1 IRF2 IRF7
GUAAACA	-3.811
ZNF143.p2	-3.900	ZNF143
NFE2.p2	-4.190	NFE2
UCAAGUA	-4.373
bHLH_family.p2	-4.745	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
AGCUGCC	-4.940
PITX1..3.p2	-5.126	PITX2 PITX3 PITX1
TFDP1.p2	-5.373	TFDP1
E2F1..5.p2	-6.956	E2F4 E2F5 E2F2 E2F1 E2F3
MYB.p2	-8.723	MYB

ISMARA

Project

Navigation

Downloads

Sample name: Thyroid

Sorted z-values for every WM.