ISMARA results: Tonsil

Sample name: Tonsil

Sorted Z-values histogram for the sample Tonsil

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
POU2F1..3.p2	12.435	POU2F2 POU2F1 POU2F3
POU5F1.p2	11.294	POU5F1
NFKB1_REL_RELA.p2	10.233	RELA REL NFKB1
FOSL2.p2	8.683	FOSL2
CUCCCAA	7.670
SPI1.p2	6.596	SPI1
AR.p2	6.452	AR
UUUUUGC	6.071
SNAI1..3.p2	5.698	SNAI2 SNAI1 SNAI3
ZNF148.p2	5.384	ZNF148
ETS1,2.p2	5.359	ETS2 ETS1
RUNX1..3.p2	4.965	RUNX1 RUNX3 RUNX2
PPARG.p2	4.532	PPARG
HAND1,2.p2	4.489	HAND1 HAND2
TBX4,5.p2	4.011	TBX5 TBX4
NKX3-2.p2	3.959	NKX3-2
POU1F1.p2	3.663	POU1F1
NFE2L2.p2	3.649	NFE2L2
FOX{C1,C2}.p2	3.250	FOXC1 FOXC2
CCCUGAG	3.234
NR3C1.p2	3.231	NR3C1
IRF1,2,7.p3	3.219	IRF1 IRF2 IRF7
ZBTB16.p2	3.192	ZBTB16
TGIF1.p2	3.123	TGIF1
PRDM1.p3	3.101	PRDM1
GATA6.p2	3.025	GATA6
NFATC1..3.p2	3.010	NFATC3 NFATC2 NFATC1
CDC5L.p2	2.944	CDC5L
RBPJ.p2	2.923	RBPJ
LMO2.p2	2.918	LMO2
MEF2{A,B,C,D}.p2	2.819	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
DMAP1_NCOR{1,2}_SMARC.p2	2.786	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
SPIB.p2	2.785	SPIB
T.p2	2.689	T
POU5F1_SOX2{dimer}.p2	2.664	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
KLF12.p2	2.546	KLF12
SMAD1..7,9.p2	2.530	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TLX2.p2	2.525	TLX2
HBP1_HMGB_SSRP1_UBTF.p2	2.490	HMGB2 HMGB3 SSRP1 UBTF HBP1
TFCP2.p2	2.459	TFCP2
NR1H4.p2	2.325	NR1H4
AAAGUGC	2.288
TFDP1.p2	2.225	TFDP1
HNF4A_NR2F1,2.p2	2.166	NR2F1 NR2F2 HNF4A
NANOG{mouse}.p2	2.156	NANOG
ONECUT1,2.p2	2.086	ONECUT2 ONECUT1
POU6F1.p2	2.050	POU6F1
ATF6.p2	2.043	ATF6
NR6A1.p2	2.007	NR6A1
FOXP3.p2	1.992	FOXP3
CUX2.p2	1.952	CUX2
LHX3,4.p2	1.946	LHX3 LHX4
ESR1.p2	1.886	ESR1
FEV.p2	1.700	FEV
UAUUGCU	1.686
TBP.p2	1.636	TBP
PATZ1.p2	1.631	PATZ1
GAGAUGA	1.559
HOXA9_MEIS1.p2	1.549	MEIS1 HOXA9
CTCF.p2	1.500	CTCF
RXRG_dimer.p3	1.441	NR1H2 RXRA PPARG PPARA RXRB RXRG
NKX2-1,4.p2	1.368	NKX2-1 NKX2-4
FOXL1.p2	1.362	FOXL1
FOX{F1,F2,J1}.p2	1.323	FOXF2 FOXJ1 FOXF1
ZNF423.p2	1.269	ZNF423
MZF1.p2	1.200	MZF1
UAAUGCU	1.174
RORA.p2	1.150	RORA
TLX1..3_NFIC{dimer}.p2	1.106	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
EN1,2.p2	1.093	EN1 EN2
AAGUGCU	1.091
AIRE.p2	1.090	AIRE
MYOD1.p2	1.072	MYOD1
MTF1.p2	1.062	MTF1
AGCUUAU	1.053
EBF1.p2	1.010	EBF1
CACAGUG	0.975
AUGUGCC	0.968
GAUCAGA	0.947
MAZ.p2	0.920	MAZ
PITX1..3.p2	0.911	PITX2 PITX3 PITX1
AGCUGCC	0.848
GGCUCAG	0.828
VSX1,2.p2	0.819	VSX2 VSX1
ACCCUGU	0.819
CCAGCAU	0.785
GTF2A1,2.p2	0.757	GTF2A1 GTF2A2
NR4A2.p2	0.755	NR4A2
GLI1..3.p2	0.729	GLI1 GLI2 GLI3
MYFfamily.p2	0.719	MYOD1 MYF6 MYF5 MYOG
AHR_ARNT_ARNT2.p2	0.718	ARNT AHR ARNT2
AGCAGCG	0.696
TFAP4.p2	0.686	TFAP4
HOX{A5,B5}.p2	0.676	HOXB5 HOXA5
ZEB1.p2	0.655	ZEB1
POU3F1..4.p2	0.640	POU3F1 POU3F3 POU3F2 POU3F4
EP300.p2	0.622	EP300
TFEB.p2	0.620	TFEB
NKX2-2,8.p2	0.611	NKX2-2 NKX2-8
UGUGCUU	0.592
ACAGUAU	0.576
SOX17.p2	0.575	SOX17
STAT1,3.p3	0.574	STAT1 STAT3
GUAGUGU	0.554
AAUGCCC	0.538
NANOG.p2	0.522	NANOG
AUGACAC	0.478
STAT5{A,B}.p2	0.474	STAT5B STAT5A
RXRA_VDR{dimer}.p2	0.465	VDR	$logo of RXRA_VDR{dimer}.p2$
AAUCUCU	0.458
ACAUUCA	0.406
AAUCUCA	0.394
EVI1.p2	0.392	EVI1
AACCGUU	0.383
IKZF2.p2	0.379	IKZF2
FOXD3.p2	0.366	FOXD3
UUGGCAC	0.363
UCCCUUU	0.360
AACCUGG	0.319
CRX.p2	0.318	CRX
ACAGUAC	0.297
AUGGCAC	0.289
ALX1.p2	0.284	ALX1
PDX1.p2	0.279	PDX1
CAGCAGG	0.266
AGCACCA	0.259
FOX{D1,D2}.p2	0.245	FOXD2 FOXD1
MYBL2.p2	0.223	MYBL2
ACUGCAU	0.204
ACUGGCC	0.185
GAGAACU	0.183
TAL1_TCF{3,4,12}.p2	0.164	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
CEBPA,B_DDIT3.p2	0.138	DDIT3 CEBPA CEBPB
TCF4_dimer.p2	0.133	TCF4
FOXA2.p3	0.132	FOXA2
GAUAUGU	0.111
CGUACCG	0.085
GAUUGUC	0.084
UGCAUUG	0.071
GGAAGAC	0.065
UGACCUA	0.059
EGR1..3.p2	0.057	EGR3 EGR1 EGR2
UGCAUAG	0.057
CREB1.p2	0.036	CREB1
GUAACAG	0.031
GATA1..3.p2	0.025	GATA1 GATA2 GATA3
ZNF238.p2	-0.010	ZNF238
NKX2-3_NKX2-5.p2	-0.014	NKX2-5 NKX2-3
ACCCGUA	-0.028
AACACUG	-0.077
GAGGUAG	-0.080
AUGGCUU	-0.097
PAX6.p2	-0.098	PAX6
PAX8.p2	-0.100	PAX8
FOXQ1.p2	-0.103	FOXQ1
PAX3,7.p2	-0.110	PAX7 PAX3
CUUUGGU	-0.112
CGUGUCU	-0.138
JUN.p2	-0.159	JUN JUND JUNB
GGACGGA	-0.198
SREBF1,2.p2	-0.202	SREBF1 SREBF2
GTF2I.p2	-0.252	GTF2I
BACH2.p2	-0.262	BACH2
GCAGCAU	-0.266
GFI1B.p2	-0.268	GFI1B
GZF1.p2	-0.276	GZF1
ARID5B.p2	-0.310	ARID5B
ATF4.p2	-0.323	ATF4
SRF.p3	-0.331	SRF
ZFP161.p2	-0.386	ZFP161
UGUGCGU	-0.403
UCAAGUA	-0.418
GUCAGUU	-0.422
AAGGUGC	-0.433
PAX4.p2	-0.458	PAX4
SOX5.p2	-0.469	SOX5
UUGUUCG	-0.497
CAGUGCA	-0.607
NFE2.p2	-0.626	NFE2
UAAGACU	-0.628
ZBTB6.p2	-0.670	ZBTB6
SOX2.p2	-0.670	SOX2
FOXO1,3,4.p2	-0.683	FOXO1 FOXO4 FOXO3
CCUUCAU	-0.698
AACGGAA	-0.746
CDX1,2,4.p2	-0.747	CDX1 CDX2 CDX4
AUUGCAC	-0.793
HSF1,2.p2	-0.818	HSF1 HSF2
TFAP2{A,C}.p2	-0.823	TFAP2C TFAP2A
UGAAAUG	-0.844
CUACAGU	-0.852
GCUACAU	-0.873
RREB1.p2	-0.897	RREB1
UAAGACG	-0.916
NFIL3.p2	-0.923	NFIL3
HNF1A.p2	-0.946	HNF1A
NKX3-1.p2	-0.953	NKX3-1
HLF.p2	-0.986	HLF
REST.p3	-1.016	REST
GGAGUGU	-1.019
EOMES.p2	-1.033	EOMES
UCACAUU	-1.076
NR5A1,2.p2	-1.096	NR5A1 NR5A2
HMGA1,2.p2	-1.155	HMGA1 HMGA2
E2F1..5.p2	-1.231	E2F4 E2F5 E2F2 E2F1 E2F3
MSX1,2.p2	-1.235	MSX1 MSX2
NKX6-1,2.p2	-1.237	NKX6-1 NKX6-2
GGCAAGA	-1.242
GGCAGUG	-1.246
HMX1.p2	-1.264	HMX1
ADNP_IRX_SIX_ZHX.p2	-1.264	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
UUGGUCC	-1.270
ELF1,2,4.p2	-1.307	ELF2 ELF1 ELF4
AGGUAGU	-1.325
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.326	ARNT MAX MYC USF1 BHLHB2 ARNT2
AGUGGUU	-1.332
GUGCAAA	-1.366
GCUGGUG	-1.373
UUGGCAA	-1.374
ZNF384.p2	-1.394	ZNF384
UCACAGU	-1.423
AACAGUC	-1.425
MAFB.p2	-1.465	MAFB
TP53.p2	-1.501	TP53
CCAGUGU	-1.521
NFE2L1.p2	-1.525	NFE2L1
TEAD1.p2	-1.544	TEAD1 TEAD2 TEAD3 TEAD4
AAGGCAC	-1.566
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.601	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
FOXN1.p2	-1.705	FOXN1
AGUGCAA	-1.712
ATF2.p2	-1.719	ATF2
EHF.p2	-1.734	EHF
FOX{I1,J2}.p2	-1.756	FOXI1 FOXJ2
DBP.p2	-1.761	DBP
IKZF1.p2	-1.810	IKZF1
GUAAACA	-1.818
PBX1.p2	-1.818	PBX1
LEF1_TCF7_TCF7L1,2.p2	-1.819	TCF7 TCF7L2 LEF1 TCF7L1
SPZ1.p2	-1.936	SPZ1
PAX5.p2	-2.002	PAX5
UCCAGUU	-2.056
HIC1.p2	-2.062	HIC1
EWSR1-FLI1.p2	-2.096	FLI1 EWSR1
PAX2.p2	-2.257	PAX2
HOX{A4,D4}.p2	-2.287	HOXA4 HOXD4
ZIC1..3.p2	-2.357	ZIC1 ZIC2 ZIC3
RXR{A,B,G}.p2	-2.480	RXRA RXRB RXRG
KLF4.p3	-2.615	KLF4
PRRX1,2.p2	-2.659	PRRX2 PRRX1
AAUACUG	-2.744
HES1.p2	-2.757	HES1
SRY.p2	-2.793	SRY
NFIX.p2	-2.872	NFIX
ESRRA.p2	-2.989	ESRRA
GFI1.p2	-2.999	GFI1
NHLH1,2.p2	-3.023	NHLH1 NHLH2
NFY{A,B,C}.p2	-3.036	NFYC NFYB NFYA
AGCAGCA	-3.053
BPTF.p2	-3.053	BPTF
STAT2,4,6.p2	-3.210	STAT2 STAT4 STAT6
GGAAUGU	-3.384
XBP1.p3	-3.407	XBP1
YY1.p2	-3.490	YY1
SOX{8,9,10}.p2	-3.805	SOX9 SOX8 SOX10
bHLH_family.p2	-3.820	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
HIF1A.p2	-3.868	HIF1A
HOX{A6,A7,B6,B7}.p2	-4.419	HOXB6 HOXA7 HOXB7 HOXA6
TFAP2B.p2	-4.653	TFAP2B
ATF5_CREB3.p2	-4.804	ATF5 CREB3
ELK1,4_GABP{A,B1}.p3	-5.154	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	-5.188	MYB
RFX1..5_RFXANK_RFXAP.p2	-6.104	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
SP1.p2	-6.565	SP1
ZNF143.p2	-7.563	ZNF143
NRF1.p2	-9.176	NRF1

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Sample name: Tonsil

Sorted z-values for every WM.