ISMARA results: TrigeminalGanglion

Sample name: TrigeminalGanglion

Sorted Z-values histogram for the sample TrigeminalGanglion

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
UUUUUGC	13.786
CUCCCAA	12.870
TLX1..3_NFIC{dimer}.p2	7.311	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
KLF12.p2	5.708	KLF12
MYFfamily.p2	5.523	MYOD1 MYF6 MYF5 MYOG
EVI1.p2	5.233	EVI1
GTF2A1,2.p2	5.082	GTF2A1 GTF2A2
HIC1.p2	5.035	HIC1
SMAD1..7,9.p2	4.870	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GTF2I.p2	4.851	GTF2I
RREB1.p2	4.733	RREB1
MTF1.p2	4.693	MTF1
SNAI1..3.p2	4.534	SNAI2 SNAI1 SNAI3
UCCCUUU	4.459
POU1F1.p2	4.457	POU1F1
JUN.p2	4.259	JUN JUND JUNB
LEF1_TCF7_TCF7L1,2.p2	4.236	TCF7 TCF7L2 LEF1 TCF7L1
TGIF1.p2	4.020	TGIF1
NANOG{mouse}.p2	3.932	NANOG
GAGGUAG	3.898
TEAD1.p2	3.876	TEAD1 TEAD2 TEAD3 TEAD4
NR1H4.p2	3.858	NR1H4
RFX1..5_RFXANK_RFXAP.p2	3.719	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
STAT1,3.p3	3.702	STAT1 STAT3
GATA6.p2	3.683	GATA6
HNF1A.p2	3.599	HNF1A
ZIC1..3.p2	3.468	ZIC1 ZIC2 ZIC3
FOXP3.p2	3.432	FOXP3
UGAAAUG	3.211
REST.p3	3.200	REST
NKX2-3_NKX2-5.p2	3.193	NKX2-5 NKX2-3
EN1,2.p2	3.151	EN1 EN2
FOXA2.p3	3.100	FOXA2
AAAGUGC	2.870
MYOD1.p2	2.859	MYOD1
POU2F1..3.p2	2.815	POU2F2 POU2F1 POU2F3
STAT2,4,6.p2	2.814	STAT2 STAT4 STAT6
RBPJ.p2	2.811	RBPJ
NHLH1,2.p2	2.760	NHLH1 NHLH2
ZNF238.p2	2.716	ZNF238
GGCUCAG	2.712
TFCP2.p2	2.709	TFCP2
FOX{D1,D2}.p2	2.598	FOXD2 FOXD1
CCCUGAG	2.570
UGUGCUU	2.512
POU5F1.p2	2.501	POU5F1
SRY.p2	2.495	SRY
HAND1,2.p2	2.452	HAND1 HAND2
MZF1.p2	2.416	MZF1
EBF1.p2	2.393	EBF1
AGCACCA	2.366
RUNX1..3.p2	2.356	RUNX1 RUNX3 RUNX2
TBP.p2	2.335	TBP
TCF4_dimer.p2	2.329	TCF4
NFATC1..3.p2	2.302	NFATC3 NFATC2 NFATC1
RXR{A,B,G}.p2	2.281	RXRA RXRB RXRG
GAGAUGA	2.229
UUGUUCG	2.191
FEV.p2	2.183	FEV
GGCAGUG	2.127
ALX1.p2	2.067	ALX1
GUAAACA	2.044
HMX1.p2	1.974	HMX1
NKX2-1,4.p2	1.967	NKX2-1 NKX2-4
TBX4,5.p2	1.930	TBX5 TBX4
GAGAACU	1.910
AGCUGCC	1.884
UGCAUAG	1.880
GATA1..3.p2	1.843	GATA1 GATA2 GATA3
ZNF384.p2	1.836	ZNF384
CACAGUG	1.687
AIRE.p2	1.672	AIRE
SRF.p3	1.641	SRF
PAX6.p2	1.579	PAX6
AAGUGCU	1.545
ATF6.p2	1.537	ATF6
NFKB1_REL_RELA.p2	1.511	RELA REL NFKB1
TLX2.p2	1.509	TLX2
NFIL3.p2	1.488	NFIL3
ZEB1.p2	1.427	ZEB1
HBP1_HMGB_SSRP1_UBTF.p2	1.408	HMGB2 HMGB3 SSRP1 UBTF HBP1
AGCAGCA	1.365
CCAGCAU	1.321
ETS1,2.p2	1.312	ETS2 ETS1
AAUCUCU	1.301
LHX3,4.p2	1.267	LHX3 LHX4
MSX1,2.p2	1.266	MSX1 MSX2
HMGA1,2.p2	1.256	HMGA1 HMGA2
GAUCAGA	1.242
POU6F1.p2	1.236	POU6F1
CGUGUCU	1.227
TAL1_TCF{3,4,12}.p2	1.219	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NR3C1.p2	1.195	NR3C1
HLF.p2	1.155	HLF
POU3F1..4.p2	1.140	POU3F1 POU3F3 POU3F2 POU3F4
AGUGCAA	1.138
MYBL2.p2	1.129	MYBL2
HNF4A_NR2F1,2.p2	1.094	NR2F1 NR2F2 HNF4A
PDX1.p2	1.066	PDX1
PRRX1,2.p2	1.008	PRRX2 PRRX1
HSF1,2.p2	0.985	HSF1 HSF2
AACACUG	0.961
CAGCAGG	0.933
TFAP4.p2	0.919	TFAP4
GUCAGUU	0.906
MEF2{A,B,C,D}.p2	0.899	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
FOXL1.p2	0.898	FOXL1
UCACAGU	0.889
PAX2.p2	0.872	PAX2
POU5F1_SOX2{dimer}.p2	0.827	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
HOXA9_MEIS1.p2	0.824	MEIS1 HOXA9
RORA.p2	0.822	RORA
CUACAGU	0.801
AUGGCUU	0.779
AAUACUG	0.779
ACCCUGU	0.762
FOS_FOS{B,L1}_JUN{B,D}.p2	0.755	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
FOX{C1,C2}.p2	0.754	FOXC1 FOXC2
RXRA_VDR{dimer}.p2	0.752	VDR	$logo of RXRA_VDR{dimer}.p2$
UAAGACU	0.726
CDC5L.p2	0.698	CDC5L
NFIX.p2	0.677	NFIX
CUUUGGU	0.664
AUGACAC	0.664
MAZ.p2	0.632	MAZ
IKZF1.p2	0.614	IKZF1
EOMES.p2	0.579	EOMES
GGCAAGA	0.576
IRF1,2,7.p3	0.571	IRF1 IRF2 IRF7
STAT5{A,B}.p2	0.570	STAT5B STAT5A
UCAAGUA	0.509
ACUGCAU	0.455
PAX8.p2	0.411	PAX8
AR.p2	0.410	AR
AAUCUCA	0.408
UUGGUCC	0.395
UUGGCAA	0.384
AGGUAGU	0.373
TFEB.p2	0.355	TFEB
T.p2	0.347	T
PPARG.p2	0.342	PPARG
ZNF423.p2	0.333	ZNF423
CDX1,2,4.p2	0.324	CDX1 CDX2 CDX4
UGUGCGU	0.321
AGCUUAU	0.282
UAUUGCU	0.271
FOX{F1,F2,J1}.p2	0.264	FOXF2 FOXJ1 FOXF1
AAUGCCC	0.261
AUUGCAC	0.236
FOSL2.p2	0.234	FOSL2
AACCUGG	0.206
ADNP_IRX_SIX_ZHX.p2	0.204	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CCAGUGU	0.195
HOX{A5,B5}.p2	0.194	HOXB5 HOXA5
FOX{I1,J2}.p2	0.193	FOXI1 FOXJ2
GLI1..3.p2	0.124	GLI1 GLI2 GLI3
AHR_ARNT_ARNT2.p2	0.107	ARNT AHR ARNT2
AAGGCAC	0.103
PAX3,7.p2	0.080	PAX7 PAX3
NANOG.p2	0.075	NANOG
NKX3-1.p2	0.065	NKX3-1
AUGUGCC	0.062
UAAUGCU	0.051
DBP.p2	0.014	DBP
SPZ1.p2	0.010	SPZ1
HOX{A4,D4}.p2	0.001	HOXA4 HOXD4
ACAUUCA	-0.027
AGCAGCG	-0.027
CEBPA,B_DDIT3.p2	-0.038	DDIT3 CEBPA CEBPB
ACCCGUA	-0.041
GGACGGA	-0.046
CGUACCG	-0.065
GGAAGAC	-0.097
TFAP2{A,C}.p2	-0.108	TFAP2C TFAP2A
GAUAUGU	-0.119
PITX1..3.p2	-0.121	PITX2 PITX3 PITX1
FOXQ1.p2	-0.194	FOXQ1
GCUACAU	-0.209
VSX1,2.p2	-0.230	VSX2 VSX1
GFI1.p2	-0.241	GFI1
IKZF2.p2	-0.264	IKZF2
UGACCUA	-0.279
GCUGGUG	-0.284
NR6A1.p2	-0.298	NR6A1
ACUGGCC	-0.338
AAGGUGC	-0.345
EGR1..3.p2	-0.346	EGR3 EGR1 EGR2
UGCAUUG	-0.348
SOX5.p2	-0.348	SOX5
AACGGAA	-0.385
GAUUGUC	-0.444
CRX.p2	-0.454	CRX
ONECUT1,2.p2	-0.539	ONECUT2 ONECUT1
GZF1.p2	-0.547	GZF1
UUGGCAC	-0.577
SREBF1,2.p2	-0.582	SREBF1 SREBF2
AACCGUU	-0.612
ACAGUAU	-0.613
ACAGUAC	-0.620
ZBTB6.p2	-0.636	ZBTB6
UAAGACG	-0.670
CCUUCAU	-0.677
GFI1B.p2	-0.718	GFI1B
GCAGCAU	-0.723
NKX6-1,2.p2	-0.742	NKX6-1 NKX6-2
NFE2.p2	-0.753	NFE2
SOX{8,9,10}.p2	-0.820	SOX9 SOX8 SOX10
FOXO1,3,4.p2	-0.824	FOXO1 FOXO4 FOXO3
EWSR1-FLI1.p2	-0.943	FLI1 EWSR1
AACAGUC	-1.028
DMAP1_NCOR{1,2}_SMARC.p2	-1.038	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GGAGUGU	-1.058
ESR1.p2	-1.070	ESR1
CAGUGCA	-1.078
CREB1.p2	-1.106	CREB1
CUX2.p2	-1.109	CUX2
GUAACAG	-1.149
EP300.p2	-1.182	EP300
PRDM1.p3	-1.191	PRDM1
ARID5B.p2	-1.234	ARID5B
LMO2.p2	-1.312	LMO2
NR4A2.p2	-1.469	NR4A2
ZBTB16.p2	-1.513	ZBTB16
NFE2L1.p2	-1.563	NFE2L1
ZFP161.p2	-1.603	ZFP161
KLF4.p3	-1.623	KLF4
AUGGCAC	-1.669
UCCAGUU	-1.672
ATF2.p2	-1.762	ATF2
HOX{A6,A7,B6,B7}.p2	-1.876	HOXB6 HOXA7 HOXB7 HOXA6
FOXD3.p2	-2.048	FOXD3
PAX4.p2	-2.092	PAX4
SOX2.p2	-2.221	SOX2
GUAGUGU	-2.228
SOX17.p2	-2.262	SOX17
PAX5.p2	-2.374	PAX5
NKX2-2,8.p2	-2.383	NKX2-2 NKX2-8
UCACAUU	-2.407
AGUGGUU	-2.466
SP1.p2	-2.584	SP1
NKX3-2.p2	-2.650	NKX3-2
NR5A1,2.p2	-2.663	NR5A1 NR5A2
SPI1.p2	-2.664	SPI1
PATZ1.p2	-2.814	PATZ1
SPIB.p2	-2.891	SPIB
FOXN1.p2	-2.930	FOXN1
ZNF148.p2	-2.968	ZNF148
CTCF.p2	-3.019	CTCF
RXRG_dimer.p3	-3.094	NR1H2 RXRA PPARG PPARA RXRB RXRG
TFAP2B.p2	-3.096	TFAP2B
PBX1.p2	-3.133	PBX1
GUGCAAA	-3.372
E2F1..5.p2	-3.732	E2F4 E2F5 E2F2 E2F1 E2F3
BACH2.p2	-3.932	BACH2
HES1.p2	-3.977	HES1
TP53.p2	-4.038	TP53
NFE2L2.p2	-4.049	NFE2L2
TFDP1.p2	-4.348	TFDP1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.379	ARNT MAX MYC USF1 BHLHB2 ARNT2
bHLH_family.p2	-4.627	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ATF4.p2	-4.841	ATF4
HIF1A.p2	-4.991	HIF1A
BPTF.p2	-5.260	BPTF
ATF5_CREB3.p2	-5.551	ATF5 CREB3
EHF.p2	-5.617	EHF
MAFB.p2	-6.039	MAFB
MYB.p2	-6.245	MYB
ESRRA.p2	-6.391	ESRRA
XBP1.p3	-7.317	XBP1
ELF1,2,4.p2	-7.665	ELF2 ELF1 ELF4
GGAAUGU	-7.797
NFY{A,B,C}.p2	-8.299	NFYC NFYB NFYA
ELK1,4_GABP{A,B1}.p3	-10.094	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ZNF143.p2	-10.741	ZNF143
NRF1.p2	-16.838	NRF1
YY1.p2	-17.330	YY1

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Sample name: TrigeminalGanglion

Sorted z-values for every WM.