ISMARA results: Uterus

Sample name: Uterus

Sorted Z-values histogram for the sample Uterus

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
SRF.p3	12.458	SRF
TEAD1.p2	6.294	TEAD1 TEAD2 TEAD3 TEAD4
HBP1_HMGB_SSRP1_UBTF.p2	5.588	HMGB2 HMGB3 SSRP1 UBTF HBP1
PRDM1.p3	5.099	PRDM1
ZNF384.p2	5.042	ZNF384
NFATC1..3.p2	4.921	NFATC3 NFATC2 NFATC1
FOX{D1,D2}.p2	4.698	FOXD2 FOXD1
AAUACUG	4.597
TFAP4.p2	4.503	TFAP4
ATF6.p2	4.410	ATF6
GUAGUGU	4.398
MAZ.p2	4.325	MAZ
STAT2,4,6.p2	4.155	STAT2 STAT4 STAT6
UUUUUGC	4.047
TFAP2{A,C}.p2	3.898	TFAP2C TFAP2A
MZF1.p2	3.895	MZF1
AGCACCA	3.643
GATA1..3.p2	3.486	GATA1 GATA2 GATA3
AAGGCAC	3.439
TFEB.p2	3.327	TFEB
HOX{A6,A7,B6,B7}.p2	3.167	HOXB6 HOXA7 HOXB7 HOXA6
MEF2{A,B,C,D}.p2	3.065	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
ATF2.p2	3.049	ATF2
ZNF238.p2	3.033	ZNF238
FOSL2.p2	3.030	FOSL2
MYFfamily.p2	2.877	MYOD1 MYF6 MYF5 MYOG
TLX1..3_NFIC{dimer}.p2	2.821	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
EGR1..3.p2	2.803	EGR3 EGR1 EGR2
NFIX.p2	2.759	NFIX
ACAGUAU	2.701
GUGCAAA	2.686
POU6F1.p2	2.677	POU6F1
AGCUUAU	2.668
CUUUGGU	2.647
FOXO1,3,4.p2	2.548	FOXO1 FOXO4 FOXO3
DBP.p2	2.364	DBP
POU3F1..4.p2	2.364	POU3F1 POU3F3 POU3F2 POU3F4
KLF12.p2	2.312	KLF12
RXRG_dimer.p3	2.173	NR1H2 RXRA PPARG PPARA RXRB RXRG
ONECUT1,2.p2	2.169	ONECUT2 ONECUT1
HSF1,2.p2	2.005	HSF1 HSF2
PPARG.p2	1.986	PPARG
TFCP2.p2	1.973	TFCP2
NHLH1,2.p2	1.962	NHLH1 NHLH2
NR6A1.p2	1.941	NR6A1
SREBF1,2.p2	1.906	SREBF1 SREBF2
UGCAUAG	1.879
AUGGCAC	1.772
AACCUGG	1.685
AAGUGCU	1.644
AGUGGUU	1.639
AUGUGCC	1.595
VSX1,2.p2	1.554	VSX2 VSX1
NKX3-2.p2	1.551	NKX3-2
GCUACAU	1.539
GAUUGUC	1.465
NKX6-1,2.p2	1.463	NKX6-1 NKX6-2
IKZF2.p2	1.443	IKZF2
ESR1.p2	1.434	ESR1
ACAUUCA	1.405
UUGGCAA	1.371
NFKB1_REL_RELA.p2	1.329	RELA REL NFKB1
TLX2.p2	1.321	TLX2
UAAUGCU	1.295
XBP1.p3	1.294	XBP1
AUUGCAC	1.183
CAGUGCA	1.121
FOS_FOS{B,L1}_JUN{B,D}.p2	1.082	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
TBP.p2	1.080	TBP
GTF2I.p2	1.076	GTF2I
ATF4.p2	1.071	ATF4
AR.p2	1.070	AR
ACAGUAC	1.023
POU5F1_SOX2{dimer}.p2	1.014	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
TFAP2B.p2	0.991	TFAP2B
CCAGUGU	0.977
GAUAUGU	0.960
RXR{A,B,G}.p2	0.935	RXRA RXRB RXRG
AGCAGCG	0.918
RBPJ.p2	0.826	RBPJ
MSX1,2.p2	0.818	MSX1 MSX2
AAGGUGC	0.814
CDX1,2,4.p2	0.809	CDX1 CDX2 CDX4
CTCF.p2	0.761	CTCF
TGIF1.p2	0.743	TGIF1
EP300.p2	0.742	EP300
FOX{C1,C2}.p2	0.711	FOXC1 FOXC2
CREB1.p2	0.710	CREB1
FOXL1.p2	0.692	FOXL1
TFDP1.p2	0.689	TFDP1
GUAAACA	0.676
UUGUUCG	0.674
GUAACAG	0.628
EOMES.p2	0.582	EOMES
PBX1.p2	0.558	PBX1
ZFP161.p2	0.550	ZFP161
NR3C1.p2	0.545	NR3C1
RORA.p2	0.501	RORA
FOX{F1,F2,J1}.p2	0.496	FOXF2 FOXJ1 FOXF1
PRRX1,2.p2	0.487	PRRX2 PRRX1
GFI1B.p2	0.483	GFI1B
PAX4.p2	0.481	PAX4
GGAAUGU	0.467
BACH2.p2	0.464	BACH2
ACUGCAU	0.456
AAUGCCC	0.429
HIC1.p2	0.427	HIC1
POU2F1..3.p2	0.427	POU2F2 POU2F1 POU2F3
CCAGCAU	0.419
UGAAAUG	0.405
CUCCCAA	0.367
GAGAACU	0.350
GAUCAGA	0.284
GGCAAGA	0.268
SRY.p2	0.264	SRY
NFE2L1.p2	0.253	NFE2L1
ACUGGCC	0.250
ZNF148.p2	0.250	ZNF148
CGUACCG	0.218
HMGA1,2.p2	0.207	HMGA1 HMGA2
RXRA_VDR{dimer}.p2	0.196	VDR	$logo of RXRA_VDR{dimer}.p2$
FEV.p2	0.185	FEV
FOXA2.p3	0.160	FOXA2
UUGGUCC	0.148
BPTF.p2	0.139	BPTF
AGGUAGU	0.136
CRX.p2	0.129	CRX
UCCAGUU	0.111
UCACAGU	0.110
PAX8.p2	0.094	PAX8
AACAGUC	0.087
HNF1A.p2	0.086	HNF1A
NANOG{mouse}.p2	0.082	NANOG
HOXA9_MEIS1.p2	0.079	MEIS1 HOXA9
CGUGUCU	0.068
AHR_ARNT_ARNT2.p2	0.050	ARNT AHR ARNT2
POU5F1.p2	0.043	POU5F1
MYBL2.p2	0.039	MYBL2
GTF2A1,2.p2	0.039	GTF2A1 GTF2A2
UGUGCGU	0.023
AUGGCUU	-0.011
AACCGUU	-0.015
TAL1_TCF{3,4,12}.p2	-0.034	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
UUGGCAC	-0.045
TCF4_dimer.p2	-0.045	TCF4
UAAGACU	-0.053
ACCCGUA	-0.058
SPIB.p2	-0.059	SPIB
GZF1.p2	-0.063	GZF1
MAFB.p2	-0.072	MAFB
RFX1..5_RFXANK_RFXAP.p2	-0.104	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
AACACUG	-0.122
ZIC1..3.p2	-0.122	ZIC1 ZIC2 ZIC3
AIRE.p2	-0.137	AIRE
SOX2.p2	-0.142	SOX2
GGACGGA	-0.158
ALX1.p2	-0.178	ALX1
GLI1..3.p2	-0.181	GLI1 GLI2 GLI3
FOXN1.p2	-0.185	FOXN1
UAAGACG	-0.188
STAT1,3.p3	-0.189	STAT1 STAT3
EVI1.p2	-0.191	EVI1
NR1H4.p2	-0.193	NR1H4
SOX5.p2	-0.198	SOX5
PAX3,7.p2	-0.255	PAX7 PAX3
POU1F1.p2	-0.260	POU1F1
ARID5B.p2	-0.276	ARID5B
GAGGUAG	-0.284
ETS1,2.p2	-0.285	ETS2 ETS1
JUN.p2	-0.290	JUN JUND JUNB
MTF1.p2	-0.307	MTF1
ELF1,2,4.p2	-0.332	ELF2 ELF1 ELF4
CUACAGU	-0.346
NFE2.p2	-0.371	NFE2
CDC5L.p2	-0.375	CDC5L
LMO2.p2	-0.379	LMO2
CAGCAGG	-0.422
PDX1.p2	-0.426	PDX1
GFI1.p2	-0.437	GFI1
AAUCUCA	-0.520
HOX{A5,B5}.p2	-0.526	HOXB5 HOXA5
AGCUGCC	-0.529
SP1.p2	-0.542	SP1
LEF1_TCF7_TCF7L1,2.p2	-0.549	TCF7 TCF7L2 LEF1 TCF7L1
SOX17.p2	-0.549	SOX17
NR5A1,2.p2	-0.556	NR5A1 NR5A2
AUGACAC	-0.580
RUNX1..3.p2	-0.592	RUNX1 RUNX3 RUNX2
UGACCUA	-0.602
SPZ1.p2	-0.635	SPZ1
MYOD1.p2	-0.658	MYOD1
TP53.p2	-0.678	TP53
GGAAGAC	-0.696
AAUCUCU	-0.700
HOX{A4,D4}.p2	-0.704	HOXA4 HOXD4
GGAGUGU	-0.729
GUCAGUU	-0.731
ATF5_CREB3.p2	-0.735	ATF5 CREB3
UGUGCUU	-0.736
AAAGUGC	-0.746
AGUGCAA	-0.756
AACGGAA	-0.775
NKX2-1,4.p2	-0.790	NKX2-1 NKX2-4
RREB1.p2	-0.799	RREB1
HAND1,2.p2	-0.806	HAND1 HAND2
EN1,2.p2	-0.861	EN1 EN2
SMAD1..7,9.p2	-0.862	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GCAGCAU	-0.879
FOX{I1,J2}.p2	-0.908	FOXI1 FOXJ2
UAUUGCU	-0.940
UCACAUU	-0.941
GATA6.p2	-0.947	GATA6
GAGAUGA	-0.948
UCCCUUU	-0.976
CEBPA,B_DDIT3.p2	-0.990	DDIT3 CEBPA CEBPB
HLF.p2	-1.036	HLF
ADNP_IRX_SIX_ZHX.p2	-1.043	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
PAX6.p2	-1.061	PAX6
LHX3,4.p2	-1.071	LHX3 LHX4
KLF4.p3	-1.125	KLF4
SPI1.p2	-1.143	SPI1
STAT5{A,B}.p2	-1.219	STAT5B STAT5A
FOXD3.p2	-1.252	FOXD3
IRF1,2,7.p3	-1.253	IRF1 IRF2 IRF7
FOXQ1.p2	-1.293	FOXQ1
CCUUCAU	-1.306
GCUGGUG	-1.338
GGCAGUG	-1.354
PATZ1.p2	-1.359	PATZ1
ZBTB6.p2	-1.365	ZBTB6
NKX3-1.p2	-1.384	NKX3-1
UGCAUUG	-1.396
NANOG.p2	-1.419	NANOG
UCAAGUA	-1.449
PITX1..3.p2	-1.486	PITX2 PITX3 PITX1
T.p2	-1.512	T
PAX5.p2	-1.536	PAX5
CACAGUG	-1.571
FOXP3.p2	-1.592	FOXP3
EWSR1-FLI1.p2	-1.602	FLI1 EWSR1
ZBTB16.p2	-1.636	ZBTB16
HMX1.p2	-1.668	HMX1
CUX2.p2	-1.716	CUX2
HNF4A_NR2F1,2.p2	-1.902	NR2F1 NR2F2 HNF4A
PAX2.p2	-2.112	PAX2
ACCCUGU	-2.113
ZNF423.p2	-2.133	ZNF423
AGCAGCA	-2.169
NFIL3.p2	-2.218	NFIL3
SOX{8,9,10}.p2	-2.281	SOX9 SOX8 SOX10
NKX2-2,8.p2	-2.284	NKX2-2 NKX2-8
GGCUCAG	-2.360
SNAI1..3.p2	-2.501	SNAI2 SNAI1 SNAI3
TBX4,5.p2	-2.551	TBX5 TBX4
bHLH_family.p2	-2.745	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NKX2-3_NKX2-5.p2	-2.757	NKX2-5 NKX2-3
CCCUGAG	-2.762
ZNF143.p2	-2.988	ZNF143
REST.p3	-2.999	REST
NRF1.p2	-3.029	NRF1
ZEB1.p2	-3.056	ZEB1
MYB.p2	-3.080	MYB
EHF.p2	-3.080	EHF
NR4A2.p2	-3.188	NR4A2
HIF1A.p2	-3.388	HIF1A
E2F1..5.p2	-3.568	E2F4 E2F5 E2F2 E2F1 E2F3
ESRRA.p2	-3.631	ESRRA
EBF1.p2	-3.765	EBF1
NFY{A,B,C}.p2	-4.346	NFYC NFYB NFYA
HES1.p2	-4.411	HES1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.584	ARNT MAX MYC USF1 BHLHB2 ARNT2
DMAP1_NCOR{1,2}_SMARC.p2	-4.648	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
IKZF1.p2	-4.705	IKZF1
NFE2L2.p2	-4.892	NFE2L2
YY1.p2	-5.538	YY1
ELK1,4_GABP{A,B1}.p3	-6.215	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$

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Sample name: Uterus

Sorted z-values for every WM.