ISMARA results: WholeBrain

Sample name: WholeBrain

Sorted Z-values histogram for the sample WholeBrain

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
REST.p3	9.655	REST
RFX1..5_RFXANK_RFXAP.p2	8.822	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MAFB.p2	7.124	MAFB
NHLH1,2.p2	7.038	NHLH1 NHLH2
ZFP161.p2	7.031	ZFP161
ESRRA.p2	6.809	ESRRA
GGCAGUG	6.760
KLF12.p2	6.357	KLF12
HOX{A6,A7,B6,B7}.p2	5.942	HOXB6 HOXA7 HOXB7 HOXA6
JUN.p2	5.833	JUN JUND JUNB
MTF1.p2	5.766	MTF1
UGUGCUU	5.747
CAGCAGG	5.704
ATF2.p2	5.584	ATF2
FOX{I1,J2}.p2	5.483	FOXI1 FOXJ2
GATA1..3.p2	5.355	GATA1 GATA2 GATA3
HIC1.p2	5.028	HIC1
MYOD1.p2	4.785	MYOD1
MEF2{A,B,C,D}.p2	4.684	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NR5A1,2.p2	4.684	NR5A1 NR5A2
RREB1.p2	4.269	RREB1
TCF4_dimer.p2	4.135	TCF4
SOX2.p2	4.129	SOX2
TGIF1.p2	3.960	TGIF1
GUGCAAA	3.939
EGR1..3.p2	3.890	EGR3 EGR1 EGR2
SP1.p2	3.881	SP1
PAX4.p2	3.830	PAX4
GGAAGAC	3.760
PAX2.p2	3.669	PAX2
AAUACUG	3.663
EWSR1-FLI1.p2	3.584	FLI1 EWSR1
DBP.p2	3.551	DBP
ZBTB6.p2	3.522	ZBTB6
NFIX.p2	3.331	NFIX
SRY.p2	3.326	SRY
UUGGCAC	3.250
GGCUCAG	3.233
MZF1.p2	3.168	MZF1
TAL1_TCF{3,4,12}.p2	3.076	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
HOX{A5,B5}.p2	2.951	HOXB5 HOXA5
ZIC1..3.p2	2.774	ZIC1 ZIC2 ZIC3
POU5F1.p2	2.774	POU5F1
UGCAUAG	2.754
AGUGCAA	2.687
SOX{8,9,10}.p2	2.682	SOX9 SOX8 SOX10
CTCF.p2	2.652	CTCF
TFEB.p2	2.579	TFEB
UAUUGCU	2.536
TFAP2B.p2	2.532	TFAP2B
SPZ1.p2	2.530	SPZ1
TFCP2.p2	2.482	TFCP2
AUGGCUU	2.411
FOXO1,3,4.p2	2.383	FOXO1 FOXO4 FOXO3
MAZ.p2	2.373	MAZ
LMO2.p2	2.122	LMO2
GUAAACA	2.115
ACAUUCA	2.103
AGCAGCA	2.002
GCUACAU	1.998
GUCAGUU	1.970
GFI1.p2	1.907	GFI1
UAAGACG	1.898
SMAD1..7,9.p2	1.840	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GTF2I.p2	1.839	GTF2I
POU5F1_SOX2{dimer}.p2	1.809	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
HAND1,2.p2	1.793	HAND1 HAND2
FOXP3.p2	1.757	FOXP3
PBX1.p2	1.754	PBX1
AACAGUC	1.688
NKX2-3_NKX2-5.p2	1.648	NKX2-5 NKX2-3
GCUGGUG	1.629
GLI1..3.p2	1.610	GLI1 GLI2 GLI3
UUGGUCC	1.568
GGCAAGA	1.522
HMGA1,2.p2	1.517	HMGA1 HMGA2
IKZF2.p2	1.502	IKZF2
NFIL3.p2	1.489	NFIL3
EVI1.p2	1.473	EVI1
STAT2,4,6.p2	1.409	STAT2 STAT4 STAT6
NFE2L1.p2	1.400	NFE2L1
AGCAGCG	1.354
NRF1.p2	1.331	NRF1
AAGUGCU	1.329
AUUGCAC	1.295
UCACAGU	1.294
CCAGCAU	1.283
NANOG.p2	1.221	NANOG
GTF2A1,2.p2	1.188	GTF2A1 GTF2A2
GFI1B.p2	1.142	GFI1B
TBX4,5.p2	1.133	TBX5 TBX4
HIF1A.p2	1.129	HIF1A
GAUCAGA	1.120
HSF1,2.p2	1.091	HSF1 HSF2
PAX3,7.p2	1.073	PAX7 PAX3
CEBPA,B_DDIT3.p2	1.040	DDIT3 CEBPA CEBPB
IKZF1.p2	0.945	IKZF1
MYFfamily.p2	0.938	MYOD1 MYF6 MYF5 MYOG
ESR1.p2	0.890	ESR1
NR3C1.p2	0.877	NR3C1
ALX1.p2	0.865	ALX1
FOX{F1,F2,J1}.p2	0.860	FOXF2 FOXJ1 FOXF1
CRX.p2	0.855	CRX
UGUGCGU	0.825
GZF1.p2	0.800	GZF1
GGACGGA	0.798
NR1H4.p2	0.795	NR1H4
HBP1_HMGB_SSRP1_UBTF.p2	0.791	HMGB2 HMGB3 SSRP1 UBTF HBP1
SREBF1,2.p2	0.788	SREBF1 SREBF2
EOMES.p2	0.742	EOMES
RXR{A,B,G}.p2	0.649	RXRA RXRB RXRG
NR4A2.p2	0.636	NR4A2
TBP.p2	0.626	TBP
NKX3-2.p2	0.607	NKX3-2
AAAGUGC	0.596
TLX1..3_NFIC{dimer}.p2	0.582	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
RUNX1..3.p2	0.576	RUNX1 RUNX3 RUNX2
ZNF143.p2	0.576	ZNF143
AACGGAA	0.553
EBF1.p2	0.551	EBF1
RORA.p2	0.535	RORA
STAT1,3.p3	0.533	STAT1 STAT3
ATF4.p2	0.530	ATF4
TP53.p2	0.518	TP53
HES1.p2	0.508	HES1
ZEB1.p2	0.504	ZEB1
GAGAACU	0.498
UCCCUUU	0.488
RXRA_VDR{dimer}.p2	0.483	VDR	$logo of RXRA_VDR{dimer}.p2$
ACUGGCC	0.470
FEV.p2	0.449	FEV
POU6F1.p2	0.426	POU6F1
STAT5{A,B}.p2	0.425	STAT5B STAT5A
CDX1,2,4.p2	0.424	CDX1 CDX2 CDX4
NKX3-1.p2	0.410	NKX3-1
CUX2.p2	0.390	CUX2
UGCAUUG	0.310
CGUGUCU	0.287
CUACAGU	0.230
AUGGCAC	0.208
NANOG{mouse}.p2	0.196	NANOG
ZNF423.p2	0.160	ZNF423
POU3F1..4.p2	0.125	POU3F1 POU3F3 POU3F2 POU3F4
AACCGUU	0.079
AUGACAC	0.067
AR.p2	0.045	AR
UAAGACU	0.044
PAX8.p2	0.017	PAX8
GAUAUGU	0.012
PAX6.p2	-0.025	PAX6
ARID5B.p2	-0.054	ARID5B
CAGUGCA	-0.058
CDC5L.p2	-0.068	CDC5L
ATF5_CREB3.p2	-0.069	ATF5 CREB3
AGCUGCC	-0.069
PDX1.p2	-0.075	PDX1
ACCCGUA	-0.079
HOXA9_MEIS1.p2	-0.089	MEIS1 HOXA9
NR6A1.p2	-0.108	NR6A1
AGGUAGU	-0.117
CACAGUG	-0.120
GGAGUGU	-0.144
LHX3,4.p2	-0.150	LHX3 LHX4
HMX1.p2	-0.167	HMX1
AAGGUGC	-0.171
EP300.p2	-0.199	EP300
GGAAUGU	-0.219
ACCCUGU	-0.257
FOX{D1,D2}.p2	-0.267	FOXD2 FOXD1
NKX6-1,2.p2	-0.296	NKX6-1 NKX6-2
GAGAUGA	-0.319
CGUACCG	-0.335
NKX2-1,4.p2	-0.339	NKX2-1 NKX2-4
FOXN1.p2	-0.342	FOXN1
HNF4A_NR2F1,2.p2	-0.359	NR2F1 NR2F2 HNF4A
NFE2.p2	-0.360	NFE2
UGACCUA	-0.378
AAUCUCU	-0.398
PRDM1.p3	-0.400	PRDM1
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.446	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AIRE.p2	-0.467	AIRE
PRRX1,2.p2	-0.493	PRRX2 PRRX1
AAUCUCA	-0.508
NKX2-2,8.p2	-0.511	NKX2-2 NKX2-8
AAUGCCC	-0.602
GCAGCAU	-0.620
MSX1,2.p2	-0.625	MSX1 MSX2
AACCUGG	-0.660
FOXL1.p2	-0.660	FOXL1
BACH2.p2	-0.660	BACH2
ACUGCAU	-0.680
NFE2L2.p2	-0.696	NFE2L2
ADNP_IRX_SIX_ZHX.p2	-0.746	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
GUAGUGU	-0.779
UGAAAUG	-0.783
bHLH_family.p2	-0.794	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
VSX1,2.p2	-0.832	VSX2 VSX1
FOX{C1,C2}.p2	-0.834	FOXC1 FOXC2
HOX{A4,D4}.p2	-0.902	HOXA4 HOXD4
UUGGCAA	-1.052
SPIB.p2	-1.091	SPIB
ZNF384.p2	-1.110	ZNF384
CCCUGAG	-1.128
GAUUGUC	-1.186
T.p2	-1.212	T
GUAACAG	-1.227
EN1,2.p2	-1.229	EN1 EN2
CCAGUGU	-1.277
YY1.p2	-1.319	YY1
UCACAUU	-1.339
AACACUG	-1.356
UCCAGUU	-1.358
PATZ1.p2	-1.381	PATZ1
POU1F1.p2	-1.389	POU1F1
TFAP2{A,C}.p2	-1.391	TFAP2C TFAP2A
ACAGUAC	-1.471
MYBL2.p2	-1.472	MYBL2
AGCUUAU	-1.472
LEF1_TCF7_TCF7L1,2.p2	-1.473	TCF7 TCF7L2 LEF1 TCF7L1
CCUUCAU	-1.478
AUGUGCC	-1.485
ETS1,2.p2	-1.568	ETS2 ETS1
ZNF238.p2	-1.589	ZNF238
SOX5.p2	-1.589	SOX5
FOSL2.p2	-1.626	FOSL2
UUGUUCG	-1.661
SNAI1..3.p2	-1.735	SNAI2 SNAI1 SNAI3
PAX5.p2	-1.843	PAX5
RXRG_dimer.p3	-1.853	NR1H2 RXRA PPARG PPARA RXRB RXRG
UAAUGCU	-1.891
ELK1,4_GABP{A,B1}.p3	-1.909	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NFATC1..3.p2	-1.915	NFATC3 NFATC2 NFATC1
AGUGGUU	-1.942
PPARG.p2	-2.036	PPARG
BPTF.p2	-2.043	BPTF
ZNF148.p2	-2.111	ZNF148
FOXQ1.p2	-2.169	FOXQ1
TEAD1.p2	-2.201	TEAD1 TEAD2 TEAD3 TEAD4
ONECUT1,2.p2	-2.358	ONECUT2 ONECUT1
EHF.p2	-2.360	EHF
HLF.p2	-2.372	HLF
ACAGUAU	-2.669
TLX2.p2	-2.696	TLX2
GATA6.p2	-2.699	GATA6
DMAP1_NCOR{1,2}_SMARC.p2	-2.727	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
CUCCCAA	-2.772
AGCACCA	-2.834
AHR_ARNT_ARNT2.p2	-2.886	ARNT AHR ARNT2
ATF6.p2	-3.006	ATF6
SRF.p3	-3.010	SRF
GAGGUAG	-3.275
HNF1A.p2	-3.331	HNF1A
SOX17.p2	-3.350	SOX17
KLF4.p3	-3.380	KLF4
TFAP4.p2	-3.594	TFAP4
FOXA2.p3	-3.617	FOXA2
POU2F1..3.p2	-3.782	POU2F2 POU2F1 POU2F3
FOXD3.p2	-3.960	FOXD3
ZBTB16.p2	-4.274	ZBTB16
RBPJ.p2	-4.317	RBPJ
XBP1.p3	-4.423	XBP1
PITX1..3.p2	-4.499	PITX2 PITX3 PITX1
CREB1.p2	-4.600	CREB1
UCAAGUA	-4.689
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.724	ARNT MAX MYC USF1 BHLHB2 ARNT2
NFY{A,B,C}.p2	-4.825	NFYC NFYB NFYA
CUUUGGU	-4.874
IRF1,2,7.p3	-4.934	IRF1 IRF2 IRF7
UUUUUGC	-5.372
NFKB1_REL_RELA.p2	-5.828	RELA REL NFKB1
SPI1.p2	-5.988	SPI1
MYB.p2	-6.004	MYB
ELF1,2,4.p2	-6.795	ELF2 ELF1 ELF4
AAGGCAC	-8.287
TFDP1.p2	-8.777	TFDP1
E2F1..5.p2	-10.018	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: WholeBrain

Sorted z-values for every WM.