ISMARA results: bonemarrow

Sample name: bonemarrow

Sorted Z-values histogram for the sample bonemarrow

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
POU2F1..3.p2	11.698	POU2F2 POU2F1 POU2F3
GATA6.p2	9.758	GATA6
TBP.p2	9.144	TBP
ETS1,2.p2	9.135	ETS2 ETS1
HAND1,2.p2	8.825	HAND1 HAND2
POU5F1.p2	7.160	POU5F1
RUNX1..3.p2	6.958	RUNX1 RUNX3 RUNX2
FOSL2.p2	6.533	FOSL2
NFKB1_REL_RELA.p2	5.861	RELA REL NFKB1
CCCUGAG	5.304
GTF2A1,2.p2	5.279	GTF2A1 GTF2A2
KLF12.p2	4.803	KLF12
TFCP2.p2	4.724	TFCP2
PITX1..3.p2	4.704	PITX2 PITX3 PITX1
AR.p2	4.503	AR
SPI1.p2	4.359	SPI1
POU1F1.p2	4.329	POU1F1
FEV.p2	4.168	FEV
AIRE.p2	4.045	AIRE
MYOD1.p2	3.989	MYOD1
HNF4A_NR2F1,2.p2	3.921	NR2F1 NR2F2 HNF4A
MYFfamily.p2	3.893	MYOD1 MYF6 MYF5 MYOG
EVI1.p2	3.817	EVI1
GAGGUAG	3.731
SNAI1..3.p2	3.708	SNAI2 SNAI1 SNAI3
GGCUCAG	3.676
ADNP_IRX_SIX_ZHX.p2	3.668	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CAGCAGG	3.525
FOXP3.p2	3.286	FOXP3
NFE2L2.p2	3.254	NFE2L2
TCF4_dimer.p2	3.183	TCF4
TGIF1.p2	3.114	TGIF1
RREB1.p2	3.007	RREB1
SPIB.p2	2.925	SPIB
GGAAGAC	2.909
CUCCCAA	2.908
STAT1,3.p3	2.903	STAT1 STAT3
SMAD1..7,9.p2	2.821	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HNF1A.p2	2.809	HNF1A
TFEB.p2	2.763	TFEB
ATF6.p2	2.716	ATF6
PATZ1.p2	2.638	PATZ1
DMAP1_NCOR{1,2}_SMARC.p2	2.594	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
FOX{C1,C2}.p2	2.470	FOXC1 FOXC2
EOMES.p2	2.456	EOMES
PPARG.p2	2.401	PPARG
ZNF423.p2	2.302	ZNF423
EN1,2.p2	2.205	EN1 EN2
NANOG{mouse}.p2	2.156	NANOG
NR5A1,2.p2	2.125	NR5A1 NR5A2
ZFP161.p2	2.108	ZFP161
NR3C1.p2	2.077	NR3C1
NFIL3.p2	1.956	NFIL3
TBX4,5.p2	1.938	TBX5 TBX4
NR1H4.p2	1.921	NR1H4
HIC1.p2	1.907	HIC1
CUUUGGU	1.870
GAGAUGA	1.830
ALX1.p2	1.809	ALX1
NANOG.p2	1.788	NANOG
GLI1..3.p2	1.748	GLI1 GLI2 GLI3
T.p2	1.712	T
IRF1,2,7.p3	1.677	IRF1 IRF2 IRF7
CEBPA,B_DDIT3.p2	1.665	DDIT3 CEBPA CEBPB
POU5F1_SOX2{dimer}.p2	1.654	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GGCAGUG	1.634
IKZF1.p2	1.631	IKZF1
FOXA2.p3	1.609	FOXA2
EP300.p2	1.589	EP300
NKX3-2.p2	1.541	NKX3-2
FOXL1.p2	1.452	FOXL1
UCCCUUU	1.415
NFIX.p2	1.410	NFIX
RXRA_VDR{dimer}.p2	1.408	VDR	$logo of RXRA_VDR{dimer}.p2$
HLF.p2	1.406	HLF
AAAGUGC	1.313
AGCUGCC	1.289
TFAP4.p2	1.274	TFAP4
CRX.p2	1.260	CRX
GTF2I.p2	1.251	GTF2I
GAUUGUC	1.247
SOX17.p2	1.138	SOX17
UAAUGCU	1.136
TP53.p2	1.132	TP53
FOX{F1,F2,J1}.p2	1.127	FOXF2 FOXJ1 FOXF1
CACAGUG	1.110
UGUGCUU	1.104
RORA.p2	1.091	RORA
UGCAUAG	1.073
AUGUGCC	1.059
ZNF148.p2	1.043	ZNF148
ZNF238.p2	1.023	ZNF238
REST.p3	0.999	REST
NR6A1.p2	0.984	NR6A1
CUX2.p2	0.974	CUX2
FOX{D1,D2}.p2	0.939	FOXD2 FOXD1
HOX{A5,B5}.p2	0.916	HOXB5 HOXA5
GAUCAGA	0.914
TLX2.p2	0.907	TLX2
MEF2{A,B,C,D}.p2	0.890	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HMX1.p2	0.886	HMX1
NFY{A,B,C}.p2	0.880	NFYC NFYB NFYA
GAGAACU	0.853
CDX1,2,4.p2	0.819	CDX1 CDX2 CDX4
ONECUT1,2.p2	0.808	ONECUT2 ONECUT1
SPZ1.p2	0.797	SPZ1
MYBL2.p2	0.796	MYBL2
ACCCUGU	0.775
NKX3-1.p2	0.749	NKX3-1
LHX3,4.p2	0.689	LHX3 LHX4
BACH2.p2	0.666	BACH2
NKX2-1,4.p2	0.662	NKX2-1 NKX2-4
CDC5L.p2	0.660	CDC5L
UAUUGCU	0.635
VSX1,2.p2	0.627	VSX2 VSX1
GGACGGA	0.608
SOX5.p2	0.548	SOX5
TLX1..3_NFIC{dimer}.p2	0.543	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
TFAP2{A,C}.p2	0.518	TFAP2C TFAP2A
AAGUGCU	0.509
HBP1_HMGB_SSRP1_UBTF.p2	0.473	HMGB2 HMGB3 SSRP1 UBTF HBP1
FOX{I1,J2}.p2	0.454	FOXI1 FOXJ2
POU6F1.p2	0.407	POU6F1
FOXO1,3,4.p2	0.394	FOXO1 FOXO4 FOXO3
PAX8.p2	0.389	PAX8
ACAUUCA	0.388
AGCAGCG	0.364
NKX2-3_NKX2-5.p2	0.359	NKX2-5 NKX2-3
UUGUUCG	0.355
CGUACCG	0.351
EBF1.p2	0.307	EBF1
PAX6.p2	0.292	PAX6
NR4A2.p2	0.285	NR4A2
AUGACAC	0.281
ZEB1.p2	0.237	ZEB1
GUAAACA	0.199
GATA1..3.p2	0.171	GATA1 GATA2 GATA3
GGAGUGU	0.154
AAUCUCU	0.147
AAUCUCA	0.137
UUGGCAC	0.125
PDX1.p2	0.080	PDX1
AGUGCAA	0.071
GAUAUGU	0.063
UGUGCGU	0.039
AACGGAA	0.027
CCAGCAU	0.024
CGUGUCU	0.020
ACCCGUA	-0.011
LEF1_TCF7_TCF7L1,2.p2	-0.027	TCF7 TCF7L2 LEF1 TCF7L1
EGR1..3.p2	-0.046	EGR3 EGR1 EGR2
ACUGGCC	-0.086
PAX3,7.p2	-0.098	PAX7 PAX3
UGACCUA	-0.120
MSX1,2.p2	-0.145	MSX1 MSX2
CCUUCAU	-0.146
AACCGUU	-0.162
EWSR1-FLI1.p2	-0.163	FLI1 EWSR1
HOXA9_MEIS1.p2	-0.202	MEIS1 HOXA9
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-0.241	ARNT MAX MYC USF1 BHLHB2 ARNT2
PAX4.p2	-0.247	PAX4
ZIC1..3.p2	-0.269	ZIC1 ZIC2 ZIC3
RXRG_dimer.p3	-0.270	NR1H2 RXRA PPARG PPARA RXRB RXRG
LMO2.p2	-0.271	LMO2
FOXN1.p2	-0.281	FOXN1
UCACAUU	-0.288
AUGGCUU	-0.300
AGCUUAU	-0.311
AGCACCA	-0.351
JUN.p2	-0.358	JUN JUND JUNB
AGCAGCA	-0.391
GCUACAU	-0.409
STAT5{A,B}.p2	-0.415	STAT5B STAT5A
AGGUAGU	-0.419
AAGGUGC	-0.442
TEAD1.p2	-0.469	TEAD1 TEAD2 TEAD3 TEAD4
AAUGCCC	-0.473
MAZ.p2	-0.503	MAZ
GFI1B.p2	-0.507	GFI1B
ARID5B.p2	-0.509	ARID5B
GGCAAGA	-0.522
AACCUGG	-0.523
RBPJ.p2	-0.558	RBPJ
GCAGCAU	-0.571
CAGUGCA	-0.620
UGCAUUG	-0.639
GUAACAG	-0.663
ESR1.p2	-0.671	ESR1
GCUGGUG	-0.736
UAAGACU	-0.748
AACAGUC	-0.758
FOXQ1.p2	-0.758	FOXQ1
ZBTB16.p2	-0.775	ZBTB16
TFDP1.p2	-0.837	TFDP1
ACUGCAU	-0.857
NFE2L1.p2	-0.859	NFE2L1
AUGGCAC	-0.866
DBP.p2	-0.872	DBP
TAL1_TCF{3,4,12}.p2	-0.904	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
AAGGCAC	-1.000
GZF1.p2	-1.014	GZF1
NFE2.p2	-1.016	NFE2
HOX{A4,D4}.p2	-1.043	HOXA4 HOXD4
MTF1.p2	-1.058	MTF1
IKZF2.p2	-1.066	IKZF2
PBX1.p2	-1.129	PBX1
CUACAGU	-1.151
UAAGACG	-1.152
AACACUG	-1.174
PAX2.p2	-1.175	PAX2
UCACAGU	-1.199
UCAAGUA	-1.236
ESRRA.p2	-1.262	ESRRA
UUUUUGC	-1.263
UUGGUCC	-1.310
HMGA1,2.p2	-1.355	HMGA1 HMGA2
ACAGUAU	-1.358
SP1.p2	-1.368	SP1
UUGGCAA	-1.400
UGAAAUG	-1.429
NHLH1,2.p2	-1.435	NHLH1 NHLH2
SRF.p3	-1.440	SRF
NKX6-1,2.p2	-1.536	NKX6-1 NKX6-2
RXR{A,B,G}.p2	-1.624	RXRA RXRB RXRG
ATF2.p2	-1.650	ATF2
ACAGUAC	-1.703
SOX2.p2	-1.710	SOX2
ZBTB6.p2	-1.749	ZBTB6
ATF4.p2	-1.749	ATF4
GUAGUGU	-1.763
NFATC1..3.p2	-1.774	NFATC3 NFATC2 NFATC1
SREBF1,2.p2	-1.792	SREBF1 SREBF2
POU3F1..4.p2	-1.834	POU3F1 POU3F3 POU3F2 POU3F4
GUCAGUU	-1.856
E2F1..5.p2	-1.884	E2F4 E2F5 E2F2 E2F1 E2F3
AUUGCAC	-1.904
MAFB.p2	-2.024	MAFB
CCAGUGU	-2.028
NKX2-2,8.p2	-2.034	NKX2-2 NKX2-8
ELF1,2,4.p2	-2.050	ELF2 ELF1 ELF4
PRDM1.p3	-2.260	PRDM1
AGUGGUU	-2.298
MZF1.p2	-2.307	MZF1
UCCAGUU	-2.310
AHR_ARNT_ARNT2.p2	-2.391	ARNT AHR ARNT2
TFAP2B.p2	-2.674	TFAP2B
SRY.p2	-2.764	SRY
GUGCAAA	-2.797
CREB1.p2	-2.815	CREB1
BPTF.p2	-2.834	BPTF
FOXD3.p2	-2.846	FOXD3
PAX5.p2	-2.851	PAX5
CTCF.p2	-2.943	CTCF
STAT2,4,6.p2	-3.092	STAT2 STAT4 STAT6
ZNF384.p2	-3.120	ZNF384
HIF1A.p2	-3.124	HIF1A
SOX{8,9,10}.p2	-3.260	SOX9 SOX8 SOX10
HSF1,2.p2	-3.294	HSF1 HSF2
RFX1..5_RFXANK_RFXAP.p2	-3.374	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
AAUACUG	-3.485
ATF5_CREB3.p2	-3.729	ATF5 CREB3
bHLH_family.p2	-4.044	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
GFI1.p2	-4.176	GFI1
KLF4.p3	-4.399	KLF4
PRRX1,2.p2	-4.411	PRRX2 PRRX1
XBP1.p3	-4.459	XBP1
HOX{A6,A7,B6,B7}.p2	-4.573	HOXB6 HOXA7 HOXB7 HOXA6
HES1.p2	-4.667	HES1
MYB.p2	-4.678	MYB
FOS_FOS{B,L1}_JUN{B,D}.p2	-4.842	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
GGAAUGU	-5.402
EHF.p2	-5.419	EHF
ZNF143.p2	-6.922	ZNF143
YY1.p2	-10.662	YY1
ELK1,4_GABP{A,B1}.p3	-10.703	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NRF1.p2	-13.608	NRF1

ISMARA

Project

Navigation

Downloads

Sample name: bonemarrow

Sorted z-values for every WM.