ISMARA results: cerebellum

Sample name: cerebellum

Sorted Z-values histogram for the sample cerebellum

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
REST.p3	8.582	REST
GGCAGUG	7.398
CAGCAGG	7.327
KLF12.p2	7.112	KLF12
RREB1.p2	7.108	RREB1
GTF2I.p2	6.801	GTF2I
HIC1.p2	6.741	HIC1
JUN.p2	6.144	JUN JUND JUNB
GGCUCAG	6.137
GATA1..3.p2	6.108	GATA1 GATA2 GATA3
GGAAGAC	6.079
MYOD1.p2	6.077	MYOD1
ZFP161.p2	5.931	ZFP161
TGIF1.p2	5.643	TGIF1
SPZ1.p2	5.605	SPZ1
CUCCCAA	5.303
GTF2A1,2.p2	5.234	GTF2A1 GTF2A2
ZIC1..3.p2	4.966	ZIC1 ZIC2 ZIC3
RFX1..5_RFXANK_RFXAP.p2	4.919	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MTF1.p2	4.724	MTF1
HOX{A5,B5}.p2	4.709	HOXB5 HOXA5
EVI1.p2	4.672	EVI1
UGUGCUU	4.641
NHLH1,2.p2	4.523	NHLH1 NHLH2
UGCAUAG	4.429
MZF1.p2	4.163	MZF1
MEF2{A,B,C,D}.p2	4.144	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
PAX2.p2	4.082	PAX2
AGUGCAA	3.956
FOXP3.p2	3.870	FOXP3
SRY.p2	3.806	SRY
HAND1,2.p2	3.761	HAND1 HAND2
GCUGGUG	3.632
HOX{A6,A7,B6,B7}.p2	3.629	HOXB6 HOXA7 HOXB7 HOXA6
SMAD1..7,9.p2	3.570	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
CACAGUG	3.564
POU5F1.p2	3.534	POU5F1
AAAGUGC	3.411
FOX{I1,J2}.p2	3.354	FOXI1 FOXJ2
CCCUGAG	3.313
AACAGUC	3.268
UAUUGCU	3.214
ZBTB6.p2	3.204	ZBTB6
ALX1.p2	3.131	ALX1
HBP1_HMGB_SSRP1_UBTF.p2	3.095	HMGB2 HMGB3 SSRP1 UBTF HBP1
EGR1..3.p2	3.078	EGR3 EGR1 EGR2
TFCP2.p2	3.072	TFCP2
EBF1.p2	3.046	EBF1
FOX{D1,D2}.p2	3.011	FOXD2 FOXD1
FEV.p2	2.946	FEV
TAL1_TCF{3,4,12}.p2	2.896	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
ATF2.p2	2.895	ATF2
EN1,2.p2	2.882	EN1 EN2
AUGGCUU	2.837
NR5A1,2.p2	2.813	NR5A1 NR5A2
MAFB.p2	2.788	MAFB
CCAGCAU	2.787
TLX1..3_NFIC{dimer}.p2	2.769	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
UUGGUCC	2.722
DBP.p2	2.638	DBP
AGCAGCA	2.621
CTCF.p2	2.480	CTCF
UCCCUUU	2.463
SNAI1..3.p2	2.408	SNAI2 SNAI1 SNAI3
TFEB.p2	2.405	TFEB
NR1H4.p2	2.371	NR1H4
RUNX1..3.p2	2.330	RUNX1 RUNX3 RUNX2
UUGGCAC	2.314
HNF4A_NR2F1,2.p2	2.298	NR2F1 NR2F2 HNF4A
MAZ.p2	2.298	MAZ
LMO2.p2	2.204	LMO2
TCF4_dimer.p2	2.185	TCF4
AGCUGCC	2.162
SOX{8,9,10}.p2	2.148	SOX9 SOX8 SOX10
NR4A2.p2	2.116	NR4A2
PATZ1.p2	2.053	PATZ1
ZNF423.p2	2.048	ZNF423
POU1F1.p2	2.043	POU1F1
RXR{A,B,G}.p2	2.043	RXRA RXRB RXRG
STAT2,4,6.p2	2.021	STAT2 STAT4 STAT6
NKX2-3_NKX2-5.p2	2.014	NKX2-5 NKX2-3
AUUGCAC	1.961
EOMES.p2	1.862	EOMES
MYFfamily.p2	1.806	MYOD1 MYF6 MYF5 MYOG
PAX4.p2	1.790	PAX4
IKZF1.p2	1.766	IKZF1
GAGAUGA	1.751
FOX{F1,F2,J1}.p2	1.743	FOXF2 FOXJ1 FOXF1
ACAUUCA	1.717
NKX2-1,4.p2	1.684	NKX2-1 NKX2-4
NFIX.p2	1.675	NFIX
ACUGGCC	1.581
RORA.p2	1.558	RORA
GUCAGUU	1.538
GLI1..3.p2	1.536	GLI1 GLI2 GLI3
HES1.p2	1.516	HES1
HSF1,2.p2	1.516	HSF1 HSF2
AAUACUG	1.470
GATA6.p2	1.461	GATA6
LEF1_TCF7_TCF7L1,2.p2	1.444	TCF7 TCF7L2 LEF1 TCF7L1
AAGUGCU	1.441
NR3C1.p2	1.374	NR3C1
NFIL3.p2	1.265	NFIL3
GGACGGA	1.262
PDX1.p2	1.256	PDX1
SOX2.p2	1.244	SOX2
HMX1.p2	1.235	HMX1
FOX{C1,C2}.p2	1.187	FOXC1 FOXC2
NFE2L1.p2	1.138	NFE2L1
TFAP2{A,C}.p2	1.133	TFAP2C TFAP2A
CGUGUCU	1.116
AR.p2	1.092	AR
GCUACAU	1.064
AIRE.p2	1.025	AIRE
UGUGCGU	1.009
RXRA_VDR{dimer}.p2	0.999	VDR	$logo of RXRA_VDR{dimer}.p2$
GUAAACA	0.992
GAUCAGA	0.988
NANOG{mouse}.p2	0.980	NANOG
CUX2.p2	0.968	CUX2
PAX6.p2	0.960	PAX6
GUGCAAA	0.956
CUACAGU	0.954
PAX3,7.p2	0.925	PAX7 PAX3
SP1.p2	0.890	SP1
POU6F1.p2	0.875	POU6F1
ONECUT1,2.p2	0.818	ONECUT2 ONECUT1
HNF1A.p2	0.814	HNF1A
ZNF238.p2	0.807	ZNF238
SREBF1,2.p2	0.802	SREBF1 SREBF2
ZEB1.p2	0.799	ZEB1
PRRX1,2.p2	0.737	PRRX2 PRRX1
ESRRA.p2	0.730	ESRRA
GGCAAGA	0.723
AACGGAA	0.712
GAGAACU	0.697
ATF6.p2	0.681	ATF6
ACCCUGU	0.587
NANOG.p2	0.558	NANOG
GZF1.p2	0.551	GZF1
STAT1,3.p3	0.543	STAT1 STAT3
POU5F1_SOX2{dimer}.p2	0.523	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
AUGACAC	0.486
UAAGACG	0.437
GGAGUGU	0.423
TBP.p2	0.416	TBP
AGGUAGU	0.383
GFI1.p2	0.367	GFI1
ARID5B.p2	0.359	ARID5B
PAX8.p2	0.345	PAX8
NR6A1.p2	0.345	NR6A1
UGAAAUG	0.327
AGCAGCG	0.297
CEBPA,B_DDIT3.p2	0.282	DDIT3 CEBPA CEBPB
LHX3,4.p2	0.274	LHX3 LHX4
EWSR1-FLI1.p2	0.261	FLI1 EWSR1
STAT5{A,B}.p2	0.241	STAT5B STAT5A
AGCACCA	0.236
GAUAUGU	0.213
IKZF2.p2	0.187	IKZF2
HLF.p2	0.183	HLF
TBX4,5.p2	0.172	TBX5 TBX4
TEAD1.p2	0.109	TEAD1 TEAD2 TEAD3 TEAD4
GCAGCAU	0.098
MSX1,2.p2	0.053	MSX1 MSX2
AAUGCCC	0.039
POU2F1..3.p2	-0.068	POU2F2 POU2F1 POU2F3
ACCCGUA	-0.086
AAUCUCA	-0.087
CDC5L.p2	-0.097	CDC5L
HOXA9_MEIS1.p2	-0.129	MEIS1 HOXA9
UAAGACU	-0.140
ESR1.p2	-0.149	ESR1
NKX6-1,2.p2	-0.186	NKX6-1 NKX6-2
CGUACCG	-0.232
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.300	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AACCGUU	-0.301
UGACCUA	-0.303
SPIB.p2	-0.326	SPIB
POU3F1..4.p2	-0.334	POU3F1 POU3F3 POU3F2 POU3F4
AAUCUCU	-0.358
CCUUCAU	-0.358
ACUGCAU	-0.372
GAUUGUC	-0.387
FOXO1,3,4.p2	-0.408	FOXO1 FOXO4 FOXO3
GAGGUAG	-0.415
GFI1B.p2	-0.468	GFI1B
UUGUUCG	-0.473
NKX3-1.p2	-0.486	NKX3-1
NKX3-2.p2	-0.523	NKX3-2
AUGUGCC	-0.557
FOXL1.p2	-0.657	FOXL1
CAGUGCA	-0.677
AACCUGG	-0.689
VSX1,2.p2	-0.706	VSX2 VSX1
ETS1,2.p2	-0.721	ETS2 ETS1
ZNF384.p2	-0.747	ZNF384
FOSL2.p2	-0.753	FOSL2
MYBL2.p2	-0.760	MYBL2
T.p2	-0.762	T
PRDM1.p3	-0.786	PRDM1
UGCAUUG	-0.875
UCACAGU	-0.978
TFAP2B.p2	-0.997	TFAP2B
CCAGUGU	-1.094
GUAGUGU	-1.126
HMGA1,2.p2	-1.134	HMGA1 HMGA2
CRX.p2	-1.158	CRX
CDX1,2,4.p2	-1.159	CDX1 CDX2 CDX4
AAGGUGC	-1.166
FOXQ1.p2	-1.222	FOXQ1
PBX1.p2	-1.311	PBX1
AACACUG	-1.434
ACAGUAC	-1.476
FOXA2.p3	-1.529	FOXA2
BACH2.p2	-1.545	BACH2
ZBTB16.p2	-1.612	ZBTB16
FOXN1.p2	-1.635	FOXN1
NKX2-2,8.p2	-1.687	NKX2-2 NKX2-8
EP300.p2	-1.690	EP300
TLX2.p2	-1.779	TLX2
AUGGCAC	-1.801
PITX1..3.p2	-1.825	PITX2 PITX3 PITX1
HOX{A4,D4}.p2	-1.885	HOXA4 HOXD4
NFE2.p2	-1.886	NFE2
SOX17.p2	-1.997	SOX17
AGCUUAU	-2.034
ADNP_IRX_SIX_ZHX.p2	-2.081	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
ATF4.p2	-2.149	ATF4
UUUUUGC	-2.161
PPARG.p2	-2.201	PPARG
BPTF.p2	-2.244	BPTF
bHLH_family.p2	-2.302	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NFE2L2.p2	-2.347	NFE2L2
SOX5.p2	-2.379	SOX5
UCACAUU	-2.458
NFATC1..3.p2	-2.474	NFATC3 NFATC2 NFATC1
RBPJ.p2	-2.510	RBPJ
ACAGUAU	-2.529
UCCAGUU	-2.589
TP53.p2	-2.630	TP53
CREB1.p2	-2.631	CREB1
UUGGCAA	-2.684
FOXD3.p2	-2.863	FOXD3
SRF.p3	-2.980	SRF
UAAUGCU	-3.014
GUAACAG	-3.064
GGAAUGU	-3.251
AGUGGUU	-3.323
NFKB1_REL_RELA.p2	-3.507	RELA REL NFKB1
ZNF143.p2	-3.567	ZNF143
DMAP1_NCOR{1,2}_SMARC.p2	-3.659	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
HIF1A.p2	-3.672	HIF1A
AHR_ARNT_ARNT2.p2	-3.705	ARNT AHR ARNT2
RXRG_dimer.p3	-3.878	NR1H2 RXRA PPARG PPARA RXRB RXRG
TFAP4.p2	-3.939	TFAP4
CUUUGGU	-4.229
IRF1,2,7.p3	-4.346	IRF1 IRF2 IRF7
SPI1.p2	-4.353	SPI1
ZNF148.p2	-4.406	ZNF148
ATF5_CREB3.p2	-4.409	ATF5 CREB3
NRF1.p2	-4.681	NRF1
UCAAGUA	-4.733
PAX5.p2	-4.805	PAX5
NFY{A,B,C}.p2	-5.458	NFYC NFYB NFYA
ELK1,4_GABP{A,B1}.p3	-5.528	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
XBP1.p3	-5.636	XBP1
KLF4.p3	-6.192	KLF4
E2F1..5.p2	-7.378	E2F4 E2F5 E2F2 E2F1 E2F3
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-7.502	ARNT MAX MYC USF1 BHLHB2 ARNT2
MYB.p2	-7.683	MYB
TFDP1.p2	-8.050	TFDP1
EHF.p2	-8.081	EHF
YY1.p2	-8.108	YY1
AAGGCAC	-8.480
ELF1,2,4.p2	-8.772	ELF2 ELF1 ELF4

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Sample name: cerebellum

Sorted z-values for every WM.