ISMARA results: fetalliver

Sample name: fetalliver

Sorted Z-values histogram for the sample fetalliver

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
HNF1A.p2	18.228	HNF1A
GATA6.p2	10.489	GATA6
HNF4A_NR2F1,2.p2	9.780	NR2F1 NR2F2 HNF4A
FOXA2.p3	9.665	FOXA2
TBP.p2	9.192	TBP
GTF2I.p2	7.141	GTF2I
FOX{C1,C2}.p2	7.073	FOXC1 FOXC2
RREB1.p2	5.636	RREB1
POU1F1.p2	4.948	POU1F1
GAGGUAG	4.940
EVI1.p2	4.925	EVI1
MSX1,2.p2	4.775	MSX1 MSX2
FOX{F1,F2,J1}.p2	4.555	FOXF2 FOXJ1 FOXF1
HLF.p2	4.489	HLF
ONECUT1,2.p2	4.457	ONECUT2 ONECUT1
LEF1_TCF7_TCF7L1,2.p2	4.177	TCF7 TCF7L2 LEF1 TCF7L1
STAT2,4,6.p2	4.066	STAT2 STAT4 STAT6
EN1,2.p2	4.064	EN1 EN2
POU5F1_SOX2{dimer}.p2	4.021	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOXP3.p2	3.948	FOXP3
MYFfamily.p2	3.883	MYOD1 MYF6 MYF5 MYOG
TBX4,5.p2	3.879	TBX5 TBX4
FOXL1.p2	3.869	FOXL1
TLX1..3_NFIC{dimer}.p2	3.788	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ETS1,2.p2	3.692	ETS2 ETS1
AIRE.p2	3.436	AIRE
HAND1,2.p2	3.353	HAND1 HAND2
CEBPA,B_DDIT3.p2	3.249	DDIT3 CEBPA CEBPB
E2F1..5.p2	3.202	E2F4 E2F5 E2F2 E2F1 E2F3
GGCUCAG	3.059
DBP.p2	2.989	DBP
CUUUGGU	2.712
NANOG{mouse}.p2	2.539	NANOG
TLX2.p2	2.524	TLX2
AACACUG	2.465
NFIL3.p2	2.462	NFIL3
ZIC1..3.p2	2.412	ZIC1 ZIC2 ZIC3
HOX{A5,B5}.p2	2.399	HOXB5 HOXA5
ZEB1.p2	2.282	ZEB1
TGIF1.p2	2.239	TGIF1
CACAGUG	2.210
TFCP2.p2	2.166	TFCP2
GLI1..3.p2	2.129	GLI1 GLI2 GLI3
HSF1,2.p2	2.075	HSF1 HSF2
NR1H4.p2	2.053	NR1H4
UUGUUCG	1.936
ZNF384.p2	1.909	ZNF384
NR5A1,2.p2	1.908	NR5A1 NR5A2
MYOD1.p2	1.856	MYOD1
FOSL2.p2	1.808	FOSL2
HIC1.p2	1.740	HIC1
PPARG.p2	1.729	PPARG
EOMES.p2	1.724	EOMES
PAX6.p2	1.718	PAX6
GCAGCAU	1.684
GAGAUGA	1.656
SMAD1..7,9.p2	1.647	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
ADNP_IRX_SIX_ZHX.p2	1.637	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
NKX2-3_NKX2-5.p2	1.583	NKX2-5 NKX2-3
GGAAGAC	1.565
RXRG_dimer.p3	1.500	NR1H2 RXRA PPARG PPARA RXRB RXRG
ACAGUAU	1.394
EGR1..3.p2	1.388	EGR3 EGR1 EGR2
AGCACCA	1.375
UCCCUUU	1.372
GAUUGUC	1.355
GAUCAGA	1.273
AUGUGCC	1.235
GTF2A1,2.p2	1.227	GTF2A1 GTF2A2
POU3F1..4.p2	1.210	POU3F1 POU3F3 POU3F2 POU3F4
MTF1.p2	1.173	MTF1
CUX2.p2	1.148	CUX2
AGGUAGU	1.110
NR6A1.p2	1.102	NR6A1
PDX1.p2	1.061	PDX1
FOX{D1,D2}.p2	1.051	FOXD2 FOXD1
PAX2.p2	1.050	PAX2
CAGUGCA	0.996
UGUGCUU	0.996
PBX1.p2	0.945	PBX1
ALX1.p2	0.938	ALX1
MAZ.p2	0.936	MAZ
IKZF1.p2	0.930	IKZF1
NR4A2.p2	0.928	NR4A2
TCF4_dimer.p2	0.770	TCF4
GUAACAG	0.757
CCCUGAG	0.719
UGUGCGU	0.712
TFEB.p2	0.709	TFEB
PATZ1.p2	0.705	PATZ1
GUAGUGU	0.683
AUGACAC	0.677
SPZ1.p2	0.674	SPZ1
GUAAACA	0.669
RORA.p2	0.667	RORA
FEV.p2	0.663	FEV
TP53.p2	0.654	TP53
AAUCUCU	0.650
REST.p3	0.645	REST
ATF6.p2	0.643	ATF6
HOX{A4,D4}.p2	0.608	HOXA4 HOXD4
AGCUUAU	0.605
TAL1_TCF{3,4,12}.p2	0.596	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
SNAI1..3.p2	0.560	SNAI2 SNAI1 SNAI3
MEF2{A,B,C,D}.p2	0.532	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GUCAGUU	0.480
CRX.p2	0.460	CRX
GGCAAGA	0.447
AAUACUG	0.446
UCACAGU	0.411
AACAGUC	0.407
VSX1,2.p2	0.403	VSX2 VSX1
GFI1.p2	0.379	GFI1
SRY.p2	0.302	SRY
SOX17.p2	0.296	SOX17
ZBTB16.p2	0.294	ZBTB16
HOXA9_MEIS1.p2	0.282	MEIS1 HOXA9
TFDP1.p2	0.280	TFDP1
AAUCUCA	0.269
POU6F1.p2	0.261	POU6F1
TFAP2{A,C}.p2	0.252	TFAP2C TFAP2A
STAT5{A,B}.p2	0.228	STAT5B STAT5A
CCUUCAU	0.203
SOX5.p2	0.201	SOX5
SPIB.p2	0.164	SPIB
AGCAGCG	0.159
AHR_ARNT_ARNT2.p2	0.158	ARNT AHR ARNT2
UGCAUAG	0.155
AAAGUGC	0.143
UAAGACU	0.140
GZF1.p2	0.096	GZF1
ACAUUCA	0.088
RXR{A,B,G}.p2	0.069	RXRA RXRB RXRG
ACUGCAU	0.045
CGUACCG	0.040
NFATC1..3.p2	0.027	NFATC3 NFATC2 NFATC1
AR.p2	0.021	AR
FOXO1,3,4.p2	0.017	FOXO1 FOXO4 FOXO3
GGACGGA	-0.003
ACCCUGU	-0.003
ZNF238.p2	-0.011	ZNF238
AAGGUGC	-0.017
AACGGAA	-0.018
PAX8.p2	-0.020	PAX8
SOX{8,9,10}.p2	-0.024	SOX9 SOX8 SOX10
ACCCGUA	-0.030
AAGUGCU	-0.053
ZNF423.p2	-0.054	ZNF423
PAX3,7.p2	-0.061	PAX7 PAX3
EBF1.p2	-0.097	EBF1
NFE2.p2	-0.100	NFE2
UCAAGUA	-0.105
UAAUGCU	-0.129
AGCAGCA	-0.145
UUGGCAC	-0.150
GAUAUGU	-0.154
IKZF2.p2	-0.172	IKZF2
UGACCUA	-0.185
NFIX.p2	-0.216	NFIX
NKX2-1,4.p2	-0.224	NKX2-1 NKX2-4
CGUGUCU	-0.252
AACCGUU	-0.292
HMGA1,2.p2	-0.294	HMGA1 HMGA2
ACUGGCC	-0.295
HBP1_HMGB_SSRP1_UBTF.p2	-0.305	HMGB2 HMGB3 SSRP1 UBTF HBP1
CUACAGU	-0.327
CAGCAGG	-0.344
AGUGCAA	-0.399
NFY{A,B,C}.p2	-0.427	NFYC NFYB NFYA
GAGAACU	-0.434
AGUGGUU	-0.467
MYBL2.p2	-0.483	MYBL2
GATA1..3.p2	-0.490	GATA1 GATA2 GATA3
AUGGCAC	-0.497
BPTF.p2	-0.498	BPTF
AACCUGG	-0.536
T.p2	-0.555	T
UCCAGUU	-0.572
AUGGCUU	-0.580
KLF12.p2	-0.615	KLF12
UGAAAUG	-0.622
UAUUGCU	-0.633
POU2F1..3.p2	-0.637	POU2F2 POU2F1 POU2F3
XBP1.p3	-0.690	XBP1
HES1.p2	-0.692	HES1
TEAD1.p2	-0.723	TEAD1 TEAD2 TEAD3 TEAD4
UAAGACG	-0.735
ATF4.p2	-0.750	ATF4
AAUGCCC	-0.769
CDC5L.p2	-0.813	CDC5L
UUGGCAA	-0.816
UGCAUUG	-0.825
RBPJ.p2	-0.836	RBPJ
bHLH_family.p2	-0.842	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
ATF5_CREB3.p2	-0.861	ATF5 CREB3
AAGGCAC	-0.868
GGAGUGU	-0.882
TFAP4.p2	-0.899	TFAP4
GFI1B.p2	-0.931	GFI1B
CREB1.p2	-0.933	CREB1
ATF2.p2	-0.940	ATF2
GCUACAU	-0.954
GGCAGUG	-0.988
RXRA_VDR{dimer}.p2	-0.991	VDR	$logo of RXRA_VDR{dimer}.p2$
EP300.p2	-1.003	EP300
UCACAUU	-1.023
ARID5B.p2	-1.030	ARID5B
GCUGGUG	-1.031
STAT1,3.p3	-1.047	STAT1 STAT3
CCAGCAU	-1.049
HIF1A.p2	-1.069	HIF1A
NANOG.p2	-1.121	NANOG
PRRX1,2.p2	-1.174	PRRX2 PRRX1
DMAP1_NCOR{1,2}_SMARC.p2	-1.200	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
POU5F1.p2	-1.205	POU5F1
FOXQ1.p2	-1.419	FOXQ1
FOX{I1,J2}.p2	-1.455	FOXI1 FOXJ2
RUNX1..3.p2	-1.476	RUNX1 RUNX3 RUNX2
CDX1,2,4.p2	-1.505	CDX1 CDX2 CDX4
UUGGUCC	-1.507
PAX5.p2	-1.537	PAX5
UUUUUGC	-1.563
MAFB.p2	-1.595	MAFB
ZBTB6.p2	-1.617	ZBTB6
NKX6-1,2.p2	-1.629	NKX6-1 NKX6-2
IRF1,2,7.p3	-1.632	IRF1 IRF2 IRF7
LMO2.p2	-1.658	LMO2
NKX3-1.p2	-1.663	NKX3-1
HMX1.p2	-1.666	HMX1
EWSR1-FLI1.p2	-1.674	FLI1 EWSR1
AUUGCAC	-1.678
NFKB1_REL_RELA.p2	-1.728	RELA REL NFKB1
PRDM1.p3	-1.729	PRDM1
CCAGUGU	-1.819
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.846	ARNT MAX MYC USF1 BHLHB2 ARNT2
MZF1.p2	-1.880	MZF1
ZNF148.p2	-1.954	ZNF148
NFE2L1.p2	-1.959	NFE2L1
SOX2.p2	-1.970	SOX2
PAX4.p2	-1.999	PAX4
ESRRA.p2	-2.042	ESRRA
BACH2.p2	-2.115	BACH2
GUGCAAA	-2.297
NKX3-2.p2	-2.321	NKX3-2
NHLH1,2.p2	-2.334	NHLH1 NHLH2
ZFP161.p2	-2.473	ZFP161
ESR1.p2	-2.490	ESR1
MYB.p2	-2.544	MYB
SREBF1,2.p2	-2.559	SREBF1 SREBF2
FOS_FOS{B,L1}_JUN{B,D}.p2	-2.623	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AGCUGCC	-2.636
SP1.p2	-2.640	SP1
HOX{A6,A7,B6,B7}.p2	-2.707	HOXB6 HOXA7 HOXB7 HOXA6
NR3C1.p2	-2.795	NR3C1
FOXD3.p2	-2.851	FOXD3
JUN.p2	-2.979	JUN JUND JUNB
LHX3,4.p2	-3.066	LHX3 LHX4
FOXN1.p2	-3.085	FOXN1
SPI1.p2	-3.086	SPI1
RFX1..5_RFXANK_RFXAP.p2	-3.109	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
ACAGUAC	-3.187
SRF.p3	-3.196	SRF
PITX1..3.p2	-3.223	PITX2 PITX3 PITX1
YY1.p2	-3.496	YY1
ELF1,2,4.p2	-3.621	ELF2 ELF1 ELF4
CUCCCAA	-3.818
NFE2L2.p2	-4.079	NFE2L2
ZNF143.p2	-4.220	ZNF143
GGAAUGU	-4.340
TFAP2B.p2	-4.484	TFAP2B
CTCF.p2	-4.512	CTCF
NKX2-2,8.p2	-4.878	NKX2-2 NKX2-8
NRF1.p2	-4.974	NRF1
EHF.p2	-6.117	EHF
KLF4.p3	-6.676	KLF4
ELK1,4_GABP{A,B1}.p3	-7.535	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$

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Sample name: fetalliver

Sorted z-values for every WM.