ISMARA results: kidney

Sample name: kidney

Sorted Z-values histogram for the sample kidney

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
HNF1A.p2	16.258	HNF1A
HNF4A_NR2F1,2.p2	12.680	NR2F1 NR2F2 HNF4A
MYFfamily.p2	6.776	MYOD1 MYF6 MYF5 MYOG
CAGCAGG	6.255
SMAD1..7,9.p2	5.634	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TGIF1.p2	5.584	TGIF1
SNAI1..3.p2	5.179	SNAI2 SNAI1 SNAI3
TBP.p2	5.091	TBP
MYOD1.p2	5.044	MYOD1
RREB1.p2	5.032	RREB1
TLX1..3_NFIC{dimer}.p2	4.823	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NANOG{mouse}.p2	4.695	NANOG
CCCUGAG	4.465
MTF1.p2	4.423	MTF1
TEAD1.p2	4.397	TEAD1 TEAD2 TEAD3 TEAD4
FOXP3.p2	4.094	FOXP3
NFIX.p2	4.057	NFIX
EN1,2.p2	4.020	EN1 EN2
UCCCUUU	3.783
EBF1.p2	3.756	EBF1
NR5A1,2.p2	3.719	NR5A1 NR5A2
CRX.p2	3.713	CRX
NR4A2.p2	3.584	NR4A2
AAAGUGC	3.528
HIC1.p2	3.346	HIC1
GATA6.p2	3.322	GATA6
ADNP_IRX_SIX_ZHX.p2	3.187	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
HAND1,2.p2	3.146	HAND1 HAND2
FOX{C1,C2}.p2	3.086	FOXC1 FOXC2
FOSL2.p2	3.055	FOSL2
CUUUGGU	2.993
HLF.p2	2.924	HLF
CACAGUG	2.900
GAGAUGA	2.874
NFKB1_REL_RELA.p2	2.854	RELA REL NFKB1
TFEB.p2	2.811	TFEB
UUGUUCG	2.785
FOXA2.p3	2.781	FOXA2
JUN.p2	2.706	JUN JUND JUNB
GGCUCAG	2.672
NFE2L1.p2	2.535	NFE2L1
PPARG.p2	2.486	PPARG
HOX{A5,B5}.p2	2.482	HOXB5 HOXA5
POU2F1..3.p2	2.474	POU2F2 POU2F1 POU2F3
ATF2.p2	2.433	ATF2
MAZ.p2	2.404	MAZ
ESR1.p2	2.356	ESR1
DBP.p2	2.355	DBP
ETS1,2.p2	2.307	ETS2 ETS1
NKX3-1.p2	2.223	NKX3-1
SP1.p2	2.212	SP1
RUNX1..3.p2	2.211	RUNX1 RUNX3 RUNX2
NHLH1,2.p2	2.206	NHLH1 NHLH2
GTF2A1,2.p2	2.183	GTF2A1 GTF2A2
GGCAGUG	2.150
MSX1,2.p2	2.120	MSX1 MSX2
TFCP2.p2	2.101	TFCP2
FOX{D1,D2}.p2	2.055	FOXD2 FOXD1
GTF2I.p2	2.029	GTF2I
GGCAAGA	2.014
EVI1.p2	1.994	EVI1
NR1H4.p2	1.975	NR1H4
NKX2-1,4.p2	1.936	NKX2-1 NKX2-4
REST.p3	1.920	REST
UUGGCAC	1.910
CUCCCAA	1.856
IKZF1.p2	1.847	IKZF1
NKX2-3_NKX2-5.p2	1.838	NKX2-5 NKX2-3
UAUUGCU	1.810
RXR{A,B,G}.p2	1.782	RXRA RXRB RXRG
HOXA9_MEIS1.p2	1.730	MEIS1 HOXA9
KLF12.p2	1.717	KLF12
ZEB1.p2	1.665	ZEB1
GAGGUAG	1.648
RORA.p2	1.612	RORA
POU1F1.p2	1.595	POU1F1
TBX4,5.p2	1.577	TBX5 TBX4
TFAP2{A,C}.p2	1.574	TFAP2C TFAP2A
HBP1_HMGB_SSRP1_UBTF.p2	1.517	HMGB2 HMGB3 SSRP1 UBTF HBP1
POU3F1..4.p2	1.474	POU3F1 POU3F3 POU3F2 POU3F4
GGAAGAC	1.434
SREBF1,2.p2	1.433	SREBF1 SREBF2
SPZ1.p2	1.419	SPZ1
TCF4_dimer.p2	1.346	TCF4
CCAGCAU	1.322
AGCAGCA	1.277
EWSR1-FLI1.p2	1.266	FLI1 EWSR1
GAGAACU	1.265
EOMES.p2	1.239	EOMES
ZFP161.p2	1.235	ZFP161
AR.p2	1.225	AR
TP53.p2	1.208	TP53
ZNF238.p2	1.195	ZNF238
GAUCAGA	1.143
AGCAGCG	1.135
FOXO1,3,4.p2	1.122	FOXO1 FOXO4 FOXO3
CCAGUGU	1.112
FOX{F1,F2,J1}.p2	1.100	FOXF2 FOXJ1 FOXF1
EP300.p2	1.084	EP300
AAUGCCC	1.081
GGACGGA	1.058
STAT1,3.p3	1.056	STAT1 STAT3
POU5F1.p2	1.042	POU5F1
HSF1,2.p2	1.039	HSF1 HSF2
AAGGCAC	1.032
ACUGGCC	1.016
ONECUT1,2.p2	1.014	ONECUT2 ONECUT1
VSX1,2.p2	0.943	VSX2 VSX1
HMGA1,2.p2	0.894	HMGA1 HMGA2
CGUGUCU	0.837
UGCAUUG	0.816
LMO2.p2	0.789	LMO2
GUAGUGU	0.787
UGCAUAG	0.712
GAUUGUC	0.674
POU6F1.p2	0.672	POU6F1
STAT5{A,B}.p2	0.670	STAT5B STAT5A
UGAAAUG	0.653
NFIL3.p2	0.647	NFIL3
SOX5.p2	0.588	SOX5
SRF.p3	0.560	SRF
GGAGUGU	0.552
AUGACAC	0.539
RXRA_VDR{dimer}.p2	0.508	VDR	$logo of RXRA_VDR{dimer}.p2$
ACCCUGU	0.370
LEF1_TCF7_TCF7L1,2.p2	0.327	TCF7 TCF7L2 LEF1 TCF7L1
T.p2	0.316	T
PAX3,7.p2	0.309	PAX7 PAX3
bHLH_family.p2	0.276	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NR6A1.p2	0.272	NR6A1
AIRE.p2	0.270	AIRE
GFI1B.p2	0.248	GFI1B
AUGUGCC	0.247
TAL1_TCF{3,4,12}.p2	0.233	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
FOXD3.p2	0.219	FOXD3
UCACAGU	0.192
CCUUCAU	0.185
ZNF423.p2	0.167	ZNF423
CGUACCG	0.164
GLI1..3.p2	0.133	GLI1 GLI2 GLI3
RFX1..5_RFXANK_RFXAP.p2	0.130	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
ESRRA.p2	0.113	ESRRA
ACAGUAU	0.078
AAUCUCU	0.064
PDX1.p2	0.055	PDX1
UGUGCGU	0.019
DMAP1_NCOR{1,2}_SMARC.p2	0.003	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ATF6.p2	0.001	ATF6
AACGGAA	-0.024
UAAGACU	-0.030
ACCCGUA	-0.046
PAX8.p2	-0.054	PAX8
PAX2.p2	-0.073	PAX2
AACAGUC	-0.106
PRDM1.p3	-0.108	PRDM1
POU5F1_SOX2{dimer}.p2	-0.131	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
AAUCUCA	-0.134
ZIC1..3.p2	-0.164	ZIC1 ZIC2 ZIC3
HOX{A6,A7,B6,B7}.p2	-0.176	HOXB6 HOXA7 HOXB7 HOXA6
AAGGUGC	-0.180
NR3C1.p2	-0.183	NR3C1
TFAP2B.p2	-0.191	TFAP2B
UUGGUCC	-0.222
CUACAGU	-0.251
BPTF.p2	-0.253	BPTF
GATA1..3.p2	-0.266	GATA1 GATA2 GATA3
HMX1.p2	-0.274	HMX1
UGACCUA	-0.287
FEV.p2	-0.310	FEV
MEF2{A,B,C,D}.p2	-0.348	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
ARID5B.p2	-0.366	ARID5B
PATZ1.p2	-0.367	PATZ1
AAGUGCU	-0.368
GUAACAG	-0.403
UAAUGCU	-0.411
PAX6.p2	-0.420	PAX6
TFAP4.p2	-0.424	TFAP4
RBPJ.p2	-0.425	RBPJ
AACCGUU	-0.456
UGUGCUU	-0.466
UUUUUGC	-0.486
GZF1.p2	-0.486	GZF1
ZNF384.p2	-0.489	ZNF384
NANOG.p2	-0.510	NANOG
SRY.p2	-0.532	SRY
GUGCAAA	-0.590
BACH2.p2	-0.592	BACH2
AGCUUAU	-0.609
AGCUGCC	-0.617
LHX3,4.p2	-0.641	LHX3 LHX4
GAUAUGU	-0.705
UCCAGUU	-0.709
GCAGCAU	-0.731
UAAGACG	-0.733
ZBTB6.p2	-0.756	ZBTB6
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.776	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
AGUGCAA	-0.803
AHR_ARNT_ARNT2.p2	-0.868	ARNT AHR ARNT2
FOX{I1,J2}.p2	-0.876	FOXI1 FOXJ2
GCUACAU	-0.937
RXRG_dimer.p3	-0.942	NR1H2 RXRA PPARG PPARA RXRB RXRG
AUGGCAC	-0.967
PBX1.p2	-0.994	PBX1
FOXQ1.p2	-0.999	FOXQ1
MYBL2.p2	-1.034	MYBL2
CDC5L.p2	-1.049	CDC5L
FOXL1.p2	-1.070	FOXL1
ALX1.p2	-1.127	ALX1
ACUGCAU	-1.129
AUGGCUU	-1.154
SOX{8,9,10}.p2	-1.164	SOX9 SOX8 SOX10
AUUGCAC	-1.168
STAT2,4,6.p2	-1.168	STAT2 STAT4 STAT6
CUX2.p2	-1.196	CUX2
GUCAGUU	-1.274
IRF1,2,7.p3	-1.274	IRF1 IRF2 IRF7
KLF4.p3	-1.312	KLF4
AACCUGG	-1.375
NKX6-1,2.p2	-1.384	NKX6-1 NKX6-2
CEBPA,B_DDIT3.p2	-1.505	DDIT3 CEBPA CEBPB
ACAGUAC	-1.562
AGGUAGU	-1.572
TLX2.p2	-1.616	TLX2
CDX1,2,4.p2	-1.662	CDX1 CDX2 CDX4
FOXN1.p2	-1.717	FOXN1
UUGGCAA	-1.759
NFATC1..3.p2	-1.761	NFATC3 NFATC2 NFATC1
CREB1.p2	-1.827	CREB1
HES1.p2	-1.850	HES1
PAX4.p2	-1.881	PAX4
MZF1.p2	-1.992	MZF1
IKZF2.p2	-2.080	IKZF2
GCUGGUG	-2.093
SOX2.p2	-2.227	SOX2
AACACUG	-2.284
NFE2.p2	-2.331	NFE2
PITX1..3.p2	-2.361	PITX2 PITX3 PITX1
CAGUGCA	-2.568
CTCF.p2	-2.688	CTCF
MAFB.p2	-2.725	MAFB
HIF1A.p2	-2.775	HIF1A
ATF4.p2	-2.839	ATF4
XBP1.p3	-2.922	XBP1
ACAUUCA	-2.959
AGUGGUU	-2.990
NKX2-2,8.p2	-2.996	NKX2-2 NKX2-8
SPIB.p2	-3.008	SPIB
AGCACCA	-3.088
SOX17.p2	-3.189	SOX17
AAUACUG	-3.195
NFY{A,B,C}.p2	-3.199	NFYC NFYB NFYA
NKX3-2.p2	-3.279	NKX3-2
ZBTB16.p2	-3.359	ZBTB16
HOX{A4,D4}.p2	-3.429	HOXA4 HOXD4
SPI1.p2	-3.496	SPI1
EGR1..3.p2	-3.522	EGR3 EGR1 EGR2
PAX5.p2	-3.676	PAX5
UCACAUU	-3.787
PRRX1,2.p2	-3.863	PRRX2 PRRX1
NFE2L2.p2	-3.892	NFE2L2
GFI1.p2	-4.039	GFI1
UCAAGUA	-4.213
EHF.p2	-4.380	EHF
ZNF148.p2	-4.581	ZNF148
GUAAACA	-4.590
YY1.p2	-5.011	YY1
ELF1,2,4.p2	-5.069	ELF2 ELF1 ELF4
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-5.188	ARNT MAX MYC USF1 BHLHB2 ARNT2
GGAAUGU	-5.985
ATF5_CREB3.p2	-7.802	ATF5 CREB3
ELK1,4_GABP{A,B1}.p3	-7.884	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	-9.198	MYB
ZNF143.p2	-9.768	ZNF143
NRF1.p2	-12.162	NRF1
E2F1..5.p2	-12.381	E2F4 E2F5 E2F2 E2F1 E2F3
TFDP1.p2	-12.603	TFDP1

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Sample name: kidney

Sorted z-values for every WM.