ISMARA results: testis

Sample name: testis

Sorted Z-values histogram for the sample testis

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
MYB.p2	22.971	MYB
RFX1..5_RFXANK_RFXAP.p2	10.822	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
JUN.p2	5.118	JUN JUND JUNB
KLF12.p2	4.859	KLF12
PITX1..3.p2	4.611	PITX2 PITX3 PITX1
RREB1.p2	4.215	RREB1
ATF6.p2	4.103	ATF6
TFAP2{A,C}.p2	4.059	TFAP2C TFAP2A
GATA6.p2	3.920	GATA6
GGCUCAG	3.804
ZIC1..3.p2	3.657	ZIC1 ZIC2 ZIC3
SRF.p3	3.650	SRF
RXR{A,B,G}.p2	3.601	RXRA RXRB RXRG
NR1H4.p2	3.552	NR1H4
CAGCAGG	3.418
NRF1.p2	3.411	NRF1
HOX{A5,B5}.p2	3.349	HOXB5 HOXA5
POU6F1.p2	3.292	POU6F1
MYOD1.p2	3.187	MYOD1
HAND1,2.p2	3.177	HAND1 HAND2
TCF4_dimer.p2	3.168	TCF4
EN1,2.p2	3.145	EN1 EN2
NR5A1,2.p2	3.124	NR5A1 NR5A2
GTF2A1,2.p2	2.987	GTF2A1 GTF2A2
AGCAGCA	2.877
NANOG.p2	2.860	NANOG
HIC1.p2	2.816	HIC1
NKX2-1,4.p2	2.809	NKX2-1 NKX2-4
EVI1.p2	2.756	EVI1
SMAD1..7,9.p2	2.714	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TFCP2.p2	2.713	TFCP2
RXRA_VDR{dimer}.p2	2.547	VDR	$logo of RXRA_VDR{dimer}.p2$
FOX{C1,C2}.p2	2.409	FOXC1 FOXC2
GAGGUAG	2.398
PBX1.p2	2.324	PBX1
PATZ1.p2	2.306	PATZ1
ELK1,4_GABP{A,B1}.p3	2.239	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
TBP.p2	2.173	TBP
UAAUGCU	2.003
CDX1,2,4.p2	1.850	CDX1 CDX2 CDX4
NFIL3.p2	1.847	NFIL3
AAAGUGC	1.825
FOXP3.p2	1.817	FOXP3
AGCACCA	1.789
RBPJ.p2	1.782	RBPJ
MEF2{A,B,C,D}.p2	1.740	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
ZNF423.p2	1.688	ZNF423
FOXO1,3,4.p2	1.561	FOXO1 FOXO4 FOXO3
HMGA1,2.p2	1.538	HMGA1 HMGA2
STAT1,3.p3	1.510	STAT1 STAT3
TBX4,5.p2	1.456	TBX5 TBX4
ALX1.p2	1.427	ALX1
GAUUGUC	1.417
FOX{F1,F2,J1}.p2	1.327	FOXF2 FOXJ1 FOXF1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.326	ARNT MAX MYC USF1 BHLHB2 ARNT2
REST.p3	1.311	REST
ZNF143.p2	1.293	ZNF143
HLF.p2	1.265	HLF
T.p2	1.254	T
SOX2.p2	1.245	SOX2
PAX5.p2	1.244	PAX5
DBP.p2	1.240	DBP
NHLH1,2.p2	1.160	NHLH1 NHLH2
MAZ.p2	1.101	MAZ
UAUUGCU	1.071
NR3C1.p2	1.051	NR3C1
TGIF1.p2	1.050	TGIF1
CREB1.p2	1.044	CREB1
CGUGUCU	1.021
ACCCUGU	1.019
EOMES.p2	1.015	EOMES
NANOG{mouse}.p2	0.984	NANOG
AGCUGCC	0.982
CCCUGAG	0.979
TEAD1.p2	0.955	TEAD1 TEAD2 TEAD3 TEAD4
AAGGUGC	0.929
POU1F1.p2	0.878	POU1F1
KLF4.p3	0.862	KLF4
ARID5B.p2	0.857	ARID5B
NFY{A,B,C}.p2	0.856	NFYC NFYB NFYA
FOXQ1.p2	0.841	FOXQ1
MYBL2.p2	0.810	MYBL2
FOX{I1,J2}.p2	0.785	FOXI1 FOXJ2
GGACGGA	0.757
UAAGACU	0.716
RORA.p2	0.702	RORA
ZBTB6.p2	0.700	ZBTB6
ATF2.p2	0.695	ATF2
CACAGUG	0.684
ZNF384.p2	0.680	ZNF384
CGUACCG	0.663
GAGAUGA	0.618
SOX17.p2	0.598	SOX17
SPZ1.p2	0.556	SPZ1
ONECUT1,2.p2	0.535	ONECUT2 ONECUT1
GGCAAGA	0.464
AGCAGCG	0.454
GAGAACU	0.444
GAUCAGA	0.437
AIRE.p2	0.420	AIRE
UAAGACG	0.414
UUGUUCG	0.401
UUGGCAA	0.396
NFE2L1.p2	0.348	NFE2L1
MSX1,2.p2	0.323	MSX1 MSX2
HOX{A6,A7,B6,B7}.p2	0.320	HOXB6 HOXA7 HOXB7 HOXA6
CUUUGGU	0.314
NFIX.p2	0.310	NFIX
AGUGCAA	0.303
LMO2.p2	0.273	LMO2
VSX1,2.p2	0.269	VSX2 VSX1
EP300.p2	0.243	EP300
CUCCCAA	0.217
AACGGAA	0.192
HNF1A.p2	0.149	HNF1A
SNAI1..3.p2	0.147	SNAI2 SNAI1 SNAI3
PAX2.p2	0.140	PAX2
GAUAUGU	0.137
UGUGCGU	0.128
CRX.p2	0.112	CRX
CCAGUGU	0.098
HOXA9_MEIS1.p2	0.096	MEIS1 HOXA9
GGAAGAC	0.092
GGCAGUG	0.074
RUNX1..3.p2	0.070	RUNX1 RUNX3 RUNX2
POU3F1..4.p2	0.053	POU3F1 POU3F3 POU3F2 POU3F4
PDX1.p2	0.048	PDX1
FOSL2.p2	0.033	FOSL2
ACCCGUA	0.021
SP1.p2	0.016	SP1
NKX2-3_NKX2-5.p2	-0.002	NKX2-5 NKX2-3
PAX6.p2	-0.007	PAX6
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.021	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
IKZF2.p2	-0.069	IKZF2
PAX8.p2	-0.087	PAX8
SRY.p2	-0.092	SRY
PAX3,7.p2	-0.100	PAX7 PAX3
HNF4A_NR2F1,2.p2	-0.105	NR2F1 NR2F2 HNF4A
PAX4.p2	-0.113	PAX4
ACAGUAC	-0.115
LEF1_TCF7_TCF7L1,2.p2	-0.116	TCF7 TCF7L2 LEF1 TCF7L1
GZF1.p2	-0.124	GZF1
GUAACAG	-0.157
GCUACAU	-0.162
FEV.p2	-0.169	FEV
GUAAACA	-0.186
ACUGGCC	-0.201
NKX6-1,2.p2	-0.226	NKX6-1 NKX6-2
NKX2-2,8.p2	-0.253	NKX2-2 NKX2-8
FOXN1.p2	-0.290	FOXN1
SOX5.p2	-0.290	SOX5
AAGUGCU	-0.321
AGCUUAU	-0.338
AR.p2	-0.365	AR
AUGUGCC	-0.393
UGACCUA	-0.415
EHF.p2	-0.415	EHF
TLX1..3_NFIC{dimer}.p2	-0.460	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
FOXL1.p2	-0.477	FOXL1
AACCGUU	-0.536
GUCAGUU	-0.562
GCUGGUG	-0.564
EWSR1-FLI1.p2	-0.572	FLI1 EWSR1
GUGCAAA	-0.576
UGCAUUG	-0.580
CUX2.p2	-0.600	CUX2
ACUGCAU	-0.632
NR6A1.p2	-0.634	NR6A1
HBP1_HMGB_SSRP1_UBTF.p2	-0.638	HMGB2 HMGB3 SSRP1 UBTF HBP1
SOX{8,9,10}.p2	-0.652	SOX9 SOX8 SOX10
GGAGUGU	-0.661
GLI1..3.p2	-0.663	GLI1 GLI2 GLI3
AACAGUC	-0.669
HSF1,2.p2	-0.681	HSF1 HSF2
AGGUAGU	-0.706
SREBF1,2.p2	-0.715	SREBF1 SREBF2
FOX{D1,D2}.p2	-0.720	FOXD2 FOXD1
UUGGCAC	-0.745
AACCUGG	-0.745
AUGACAC	-0.747
ADNP_IRX_SIX_ZHX.p2	-0.782	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
AUGGCUU	-0.807
HES1.p2	-0.814	HES1
HMX1.p2	-0.834	HMX1
NR4A2.p2	-0.835	NR4A2
UGCAUAG	-0.844
CUACAGU	-0.867
ACAUUCA	-0.886
CAGUGCA	-0.909
EBF1.p2	-0.928	EBF1
UCCCUUU	-0.934
AAUCUCA	-0.952
ZNF238.p2	-0.964	ZNF238
POU2F1..3.p2	-0.969	POU2F2 POU2F1 POU2F3
LHX3,4.p2	-0.992	LHX3 LHX4
TFAP4.p2	-1.024	TFAP4
CCUUCAU	-1.025
ESR1.p2	-1.068	ESR1
CCAGCAU	-1.069
POU5F1_SOX2{dimer}.p2	-1.071	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
PPARG.p2	-1.112	PPARG
AAGGCAC	-1.129
UGUGCUU	-1.138
GFI1B.p2	-1.154	GFI1B
NFE2L2.p2	-1.193	NFE2L2
ACAGUAU	-1.208
CDC5L.p2	-1.217	CDC5L
AAUCUCU	-1.229
GUAGUGU	-1.316
NKX3-1.p2	-1.318	NKX3-1
TP53.p2	-1.374	TP53
UCCAGUU	-1.386
FOXA2.p3	-1.390	FOXA2
RXRG_dimer.p3	-1.391	NR1H2 RXRA PPARG PPARA RXRB RXRG
AUGGCAC	-1.399
UGAAAUG	-1.422
AAUGCCC	-1.424
IKZF1.p2	-1.491	IKZF1
MYFfamily.p2	-1.493	MYOD1 MYF6 MYF5 MYOG
DMAP1_NCOR{1,2}_SMARC.p2	-1.497	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
TFDP1.p2	-1.573	TFDP1
GATA1..3.p2	-1.584	GATA1 GATA2 GATA3
STAT5{A,B}.p2	-1.614	STAT5B STAT5A
UCACAGU	-1.627
NFATC1..3.p2	-1.632	NFATC3 NFATC2 NFATC1
ZEB1.p2	-1.648	ZEB1
HIF1A.p2	-1.657	HIF1A
AUUGCAC	-1.675
UUGGUCC	-1.725
ZBTB16.p2	-1.727	ZBTB16
BPTF.p2	-1.779	BPTF
MZF1.p2	-1.815	MZF1
MTF1.p2	-1.873	MTF1
TAL1_TCF{3,4,12}.p2	-1.894	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
HOX{A4,D4}.p2	-1.981	HOXA4 HOXD4
TLX2.p2	-1.991	TLX2
AACACUG	-1.994
CEBPA,B_DDIT3.p2	-2.023	DDIT3 CEBPA CEBPB
MAFB.p2	-2.232	MAFB
ZFP161.p2	-2.414	ZFP161
UCACAUU	-2.480
NFE2.p2	-2.567	NFE2
EGR1..3.p2	-2.594	EGR3 EGR1 EGR2
GCAGCAU	-2.605
ZNF148.p2	-2.621	ZNF148
POU5F1.p2	-2.671	POU5F1
AGUGGUU	-2.700
TFEB.p2	-2.750	TFEB
BACH2.p2	-2.799	BACH2
GFI1.p2	-2.844	GFI1
PRDM1.p3	-2.910	PRDM1
ESRRA.p2	-2.911	ESRRA
AAUACUG	-2.946
TFAP2B.p2	-2.984	TFAP2B
CTCF.p2	-2.985	CTCF
ETS1,2.p2	-3.053	ETS2 ETS1
NFKB1_REL_RELA.p2	-3.089	RELA REL NFKB1
UCAAGUA	-3.359
bHLH_family.p2	-3.478	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
UUUUUGC	-3.516
PRRX1,2.p2	-3.529	PRRX2 PRRX1
XBP1.p3	-3.960	XBP1
STAT2,4,6.p2	-3.968	STAT2 STAT4 STAT6
ATF4.p2	-4.177	ATF4
NKX3-2.p2	-4.240	NKX3-2
FOXD3.p2	-4.543	FOXD3
YY1.p2	-4.574	YY1
SPIB.p2	-4.682	SPIB
GGAAUGU	-4.919
GTF2I.p2	-4.964	GTF2I
SPI1.p2	-4.992	SPI1
AHR_ARNT_ARNT2.p2	-5.066	ARNT AHR ARNT2
IRF1,2,7.p3	-5.184	IRF1 IRF2 IRF7
E2F1..5.p2	-5.374	E2F4 E2F5 E2F2 E2F1 E2F3
ATF5_CREB3.p2	-6.633	ATF5 CREB3
ELF1,2,4.p2	-7.684	ELF2 ELF1 ELF4

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Sample name: testis

Sorted z-values for every WM.