ISMARA results: GNF_1

Sample name: GNF_1_SmoothMuscle

Sorted Z-values histogram for the sample GNF_1_SmoothMuscle

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
XBP1.p3	12.899	XBP1
TBP.p2	6.049	TBP
ATF6.p2	4.872	ATF6
ZNF238.p2	4.730	ZNF238
KLF4.p3	4.459	KLF4
SRF.p3	4.239	SRF
TFAP2{A,C}.p2	4.201	TFAP2C TFAP2A
TEAD1.p2	3.915	TEAD1 TEAD2 TEAD3 TEAD4
AGCACCA	3.572
MYFfamily.p2	3.484	MYOD1 MYF6 MYF5 MYOG
GGAAUGU	2.986
TLX1..3_NFIC{dimer}.p2	2.984	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NR6A1.p2	2.925	NR6A1
AGUGGUU	2.657
HIF1A.p2	2.636	HIF1A
AAUACUG	2.558
CUUUGGU	2.557
UCCAGUU	2.551
STAT1,3.p3	2.548	STAT1 STAT3
SPIB.p2	2.298	SPIB
ZNF148.p2	2.254	ZNF148
NFE2L1.p2	2.163	NFE2L1
ELF1,2,4.p2	2.135	ELF2 ELF1 ELF4
AHR_ARNT_ARNT2.p2	2.126	ARNT AHR ARNT2
AAGGCAC	2.107
MZF1.p2	1.871	MZF1
TFAP4.p2	1.854	TFAP4
NKX3-2.p2	1.809	NKX3-2
FEV.p2	1.797	FEV
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	1.763	ARNT MAX MYC USF1 BHLHB2 ARNT2
NFE2.p2	1.758	NFE2
UCAAGUA	1.722
CEBPA,B_DDIT3.p2	1.654	DDIT3 CEBPA CEBPB
HOX{A6,A7,B6,B7}.p2	1.629	HOXB6 HOXA7 HOXB7 HOXA6
ACAGUAU	1.617
UCACAUU	1.605
GATA1..3.p2	1.601	GATA1 GATA2 GATA3
AAGGUGC	1.587
RXR{A,B,G}.p2	1.584	RXRA RXRB RXRG
GUAAACA	1.573
AUUGCAC	1.564
HBP1_HMGB_SSRP1_UBTF.p2	1.535	HMGB2 HMGB3 SSRP1 UBTF HBP1
ZBTB6.p2	1.523	ZBTB6
PRDM1.p3	1.477	PRDM1
GTF2I.p2	1.455	GTF2I
AACGGAA	1.436
CTCF.p2	1.347	CTCF
GUGCAAA	1.242
BACH2.p2	1.236	BACH2
CDX1,2,4.p2	1.217	CDX1 CDX2 CDX4
FOXQ1.p2	1.208	FOXQ1
TP53.p2	1.199	TP53
FOS_FOS{B,L1}_JUN{B,D}.p2	1.198	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
MTF1.p2	1.163	MTF1
POU5F1_SOX2{dimer}.p2	1.141	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
ZNF384.p2	1.134	ZNF384
AAUGCCC	1.073
EP300.p2	1.002	EP300
FOSL2.p2	0.933	FOSL2
ADNP_IRX_SIX_ZHX.p2	0.932	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
IKZF2.p2	0.920	IKZF2
CACAGUG	0.912
CDC5L.p2	0.890	CDC5L
HIC1.p2	0.889	HIC1
PATZ1.p2	0.851	PATZ1
STAT2,4,6.p2	0.837	STAT2 STAT4 STAT6
PRRX1,2.p2	0.821	PRRX2 PRRX1
GCAGCAU	0.816
MYBL2.p2	0.804	MYBL2
TLX2.p2	0.780	TLX2
UUGGUCC	0.767
POU3F1..4.p2	0.759	POU3F1 POU3F3 POU3F2 POU3F4
UGAAAUG	0.739
SOX17.p2	0.729	SOX17
GUAGUGU	0.727
ZNF423.p2	0.719	ZNF423
NFE2L2.p2	0.717	NFE2L2
NFKB1_REL_RELA.p2	0.692	RELA REL NFKB1
TFCP2.p2	0.692	TFCP2
AUGACAC	0.688
HLF.p2	0.653	HLF
UUGGCAC	0.647
FOXL1.p2	0.636	FOXL1
T.p2	0.630	T
CGUACCG	0.617
TFAP2B.p2	0.612	TFAP2B
MSX1,2.p2	0.611	MSX1 MSX2
SOX{8,9,10}.p2	0.605	SOX9 SOX8 SOX10
AGCAGCG	0.546
PDX1.p2	0.545	PDX1
GFI1.p2	0.482	GFI1
LEF1_TCF7_TCF7L1,2.p2	0.454	TCF7 TCF7L2 LEF1 TCF7L1
ESR1.p2	0.441	ESR1
AAAGUGC	0.425
NFIX.p2	0.414	NFIX
CCAGUGU	0.387
TFEB.p2	0.364	TFEB
AGGUAGU	0.354
GAGAACU	0.348
UAAGACG	0.319
ATF5_CREB3.p2	0.317	ATF5 CREB3
JUN.p2	0.309	JUN JUND JUNB
HNF1A.p2	0.309	HNF1A
HMGA1,2.p2	0.286	HMGA1 HMGA2
NHLH1,2.p2	0.277	NHLH1 NHLH2
ACAGUAC	0.258
CUACAGU	0.252
NFATC1..3.p2	0.231	NFATC3 NFATC2 NFATC1
POU6F1.p2	0.220	POU6F1
UGACCUA	0.217
GGCAAGA	0.206
EHF.p2	0.178	EHF
FOX{F1,F2,J1}.p2	0.167	FOXF2 FOXJ1 FOXF1
TCF4_dimer.p2	0.162	TCF4
NANOG{mouse}.p2	0.159	NANOG
HSF1,2.p2	0.146	HSF1 HSF2
AACCGUU	0.134
RREB1.p2	0.123	RREB1
HAND1,2.p2	0.120	HAND1 HAND2
VSX1,2.p2	0.103	VSX2 VSX1
GAUAUGU	0.088
ACCCUGU	0.078
ATF2.p2	0.069	ATF2
UGCAUUG	0.062
GGAGUGU	0.056
FOXD3.p2	0.051	FOXD3
GGACGGA	0.045
GATA6.p2	0.044	GATA6
GTF2A1,2.p2	0.033	GTF2A1 GTF2A2
GZF1.p2	0.029	GZF1
EOMES.p2	-0.003	EOMES
ESRRA.p2	-0.007	ESRRA
PAX8.p2	-0.008	PAX8
ACCCGUA	-0.012
GFI1B.p2	-0.037	GFI1B
UAAUGCU	-0.038
AAUCUCU	-0.086
PAX3,7.p2	-0.091	PAX7 PAX3
ARID5B.p2	-0.107	ARID5B
BPTF.p2	-0.138	BPTF
UCCCUUU	-0.143
UAAGACU	-0.147
NANOG.p2	-0.149	NANOG
PAX6.p2	-0.151	PAX6
UUGUUCG	-0.153
EGR1..3.p2	-0.156	EGR3 EGR1 EGR2
GLI1..3.p2	-0.161	GLI1 GLI2 GLI3
SRY.p2	-0.184	SRY
CGUGUCU	-0.191
FOX{C1,C2}.p2	-0.196	FOXC1 FOXC2
AGCUGCC	-0.203
NKX6-1,2.p2	-0.218	NKX6-1 NKX6-2
STAT5{A,B}.p2	-0.251	STAT5B STAT5A
GAGAUGA	-0.252
CCAGCAU	-0.253
GAGGUAG	-0.260
HMX1.p2	-0.262	HMX1
NR3C1.p2	-0.296	NR3C1
CRX.p2	-0.318	CRX
AACCUGG	-0.330
EVI1.p2	-0.332	EVI1
AAUCUCA	-0.350
GCUGGUG	-0.366
HNF4A_NR2F1,2.p2	-0.375	NR2F1 NR2F2 HNF4A
ACUGCAU	-0.386
GAUCAGA	-0.408
SREBF1,2.p2	-0.430	SREBF1 SREBF2
ZIC1..3.p2	-0.436	ZIC1 ZIC2 ZIC3
ETS1,2.p2	-0.454	ETS2 ETS1
PPARG.p2	-0.456	PPARG
GUAACAG	-0.464
TAL1_TCF{3,4,12}.p2	-0.467	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
AACACUG	-0.469
TFDP1.p2	-0.476	TFDP1
AUGUGCC	-0.488
UGUGCGU	-0.498
SPZ1.p2	-0.529	SPZ1
PAX5.p2	-0.536	PAX5
EWSR1-FLI1.p2	-0.580	FLI1 EWSR1
NFIL3.p2	-0.591	NFIL3
HOX{A4,D4}.p2	-0.623	HOXA4 HOXD4
FOX{I1,J2}.p2	-0.629	FOXI1 FOXJ2
PAX4.p2	-0.634	PAX4
CUX2.p2	-0.638	CUX2
CCUUCAU	-0.647
GGAAGAC	-0.652
ACUGGCC	-0.655
AGCAGCA	-0.700
UGCAUAG	-0.710
ELK1,4_GABP{A,B1}.p3	-0.728	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ZBTB16.p2	-0.759	ZBTB16
LHX3,4.p2	-0.771	LHX3 LHX4
FOXO1,3,4.p2	-0.785	FOXO1 FOXO4 FOXO3
AIRE.p2	-0.794	AIRE
AUGGCAC	-0.801
YY1.p2	-0.816	YY1
PBX1.p2	-0.848	PBX1
GUCAGUU	-0.852
SPI1.p2	-0.858	SPI1
GGCUCAG	-0.861
AR.p2	-0.870	AR
HOXA9_MEIS1.p2	-0.886	MEIS1 HOXA9
RXRG_dimer.p3	-0.910	NR1H2 RXRA PPARG PPARA RXRB RXRG
CAGCAGG	-0.922
DMAP1_NCOR{1,2}_SMARC.p2	-0.927	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
NR5A1,2.p2	-0.938	NR5A1 NR5A2
GAUUGUC	-0.953
UCACAGU	-0.968
FOXA2.p3	-1.053	FOXA2
SP1.p2	-1.056	SP1
HOX{A5,B5}.p2	-1.058	HOXB5 HOXA5
SOX2.p2	-1.078	SOX2
IKZF1.p2	-1.098	IKZF1
RBPJ.p2	-1.118	RBPJ
RXRA_VDR{dimer}.p2	-1.131	VDR	$logo of RXRA_VDR{dimer}.p2$
NKX2-3_NKX2-5.p2	-1.152	NKX2-5 NKX2-3
RORA.p2	-1.166	RORA
UUGGCAA	-1.166
SMAD1..7,9.p2	-1.211	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
NR1H4.p2	-1.218	NR1H4
IRF1,2,7.p3	-1.223	IRF1 IRF2 IRF7
NKX3-1.p2	-1.253	NKX3-1
DBP.p2	-1.281	DBP
MAZ.p2	-1.306	MAZ
FOX{D1,D2}.p2	-1.327	FOXD2 FOXD1
PITX1..3.p2	-1.375	PITX2 PITX3 PITX1
EBF1.p2	-1.381	EBF1
NKX2-2,8.p2	-1.381	NKX2-2 NKX2-8
CCCUGAG	-1.410
AACAGUC	-1.418
CAGUGCA	-1.418
POU1F1.p2	-1.444	POU1F1
LMO2.p2	-1.455	LMO2
KLF12.p2	-1.471	KLF12
bHLH_family.p2	-1.482	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
SOX5.p2	-1.495	SOX5
FOXP3.p2	-1.548	FOXP3
AGCUUAU	-1.557
ONECUT1,2.p2	-1.605	ONECUT2 ONECUT1
ATF4.p2	-1.607	ATF4
CREB1.p2	-1.688	CREB1
ZEB1.p2	-1.707	ZEB1
MAFB.p2	-1.721	MAFB
FOXN1.p2	-1.730	FOXN1
POU5F1.p2	-1.758	POU5F1
HES1.p2	-1.810	HES1
RFX1..5_RFXANK_RFXAP.p2	-1.819	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
GCUACAU	-1.864
NRF1.p2	-1.954	NRF1
NKX2-1,4.p2	-2.055	NKX2-1 NKX2-4
NR4A2.p2	-2.065	NR4A2
AGUGCAA	-2.095
ZFP161.p2	-2.103	ZFP161
RUNX1..3.p2	-2.144	RUNX1 RUNX3 RUNX2
POU2F1..3.p2	-2.175	POU2F2 POU2F1 POU2F3
REST.p3	-2.238	REST
TBX4,5.p2	-2.254	TBX5 TBX4
EN1,2.p2	-2.281	EN1 EN2
AUGGCUU	-2.296
MYOD1.p2	-2.315	MYOD1
AAGUGCU	-2.326
ALX1.p2	-2.349	ALX1
GGCAGUG	-2.392
UGUGCUU	-2.462
MEF2{A,B,C,D}.p2	-2.582	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
UAUUGCU	-2.625
ACAUUCA	-2.653
TGIF1.p2	-2.818	TGIF1
CUCCCAA	-2.973
UUUUUGC	-3.335
ZNF143.p2	-3.544	ZNF143
PAX2.p2	-4.016	PAX2
NFY{A,B,C}.p2	-4.157	NFYC NFYB NFYA
SNAI1..3.p2	-4.479	SNAI2 SNAI1 SNAI3
MYB.p2	-4.896	MYB
E2F1..5.p2	-10.050	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: GNF_1_SmoothMuscle

Sorted z-values for every WM.