ISMARA results: GNF_2

Sample name: GNF_2_PB-CD8+Tcells

Sorted Z-values histogram for the sample GNF_2_PB-CD8+Tcells

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RUNX1..3.p2	5.719	RUNX1 RUNX3 RUNX2
SPI1.p2	5.432	SPI1
ELF1,2,4.p2	5.185	ELF2 ELF1 ELF4
YY1.p2	5.019	YY1
ELK1,4_GABP{A,B1}.p3	4.941	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NRF1.p2	4.586	NRF1
SPIB.p2	4.415	SPIB
FOX{D1,D2}.p2	4.265	FOXD2 FOXD1
IRF1,2,7.p3	4.150	IRF1 IRF2 IRF7
ZBTB16.p2	4.104	ZBTB16
CREB1.p2	3.945	CREB1
NKX2-2,8.p2	3.415	NKX2-2 NKX2-8
NFKB1_REL_RELA.p2	3.413	RELA REL NFKB1
ZNF143.p2	3.214	ZNF143
DMAP1_NCOR{1,2}_SMARC.p2	3.167	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ACAUUCA	3.007
MAZ.p2	2.947	MAZ
GGAAUGU	2.924
PAX2.p2	2.854	PAX2
HOX{A4,D4}.p2	2.816	HOXA4 HOXD4
PRDM1.p3	2.693	PRDM1
SOX5.p2	2.458	SOX5
AUGGCAC	2.353
GCAGCAU	2.335
RXRG_dimer.p3	2.224	NR1H2 RXRA PPARG PPARA RXRB RXRG
MAFB.p2	2.208	MAFB
CDX1,2,4.p2	2.155	CDX1 CDX2 CDX4
CUX2.p2	2.126	CUX2
CCCUGAG	2.119
AIRE.p2	2.100	AIRE
AAGUGCU	2.100
HES1.p2	2.052	HES1
ETS1,2.p2	1.959	ETS2 ETS1
RXRA_VDR{dimer}.p2	1.841	VDR	$logo of RXRA_VDR{dimer}.p2$
AHR_ARNT_ARNT2.p2	1.839	ARNT AHR ARNT2
SNAI1..3.p2	1.773	SNAI2 SNAI1 SNAI3
NKX3-2.p2	1.765	NKX3-2
TBX4,5.p2	1.751	TBX5 TBX4
UCACAUU	1.656
PPARG.p2	1.624	PPARG
CUCCCAA	1.585
HOXA9_MEIS1.p2	1.550	MEIS1 HOXA9
NFY{A,B,C}.p2	1.494	NFYC NFYB NFYA
PITX1..3.p2	1.486	PITX2 PITX3 PITX1
ACAGUAC	1.461
AGCUUAU	1.407
HMX1.p2	1.350	HMX1
PATZ1.p2	1.306	PATZ1
NFE2L2.p2	1.294	NFE2L2
LHX3,4.p2	1.292	LHX3 LHX4
GLI1..3.p2	1.286	GLI1 GLI2 GLI3
GGCUCAG	1.273
CTCF.p2	1.261	CTCF
GAGAUGA	1.257
FEV.p2	1.254	FEV
KLF4.p3	1.244	KLF4
STAT5{A,B}.p2	1.227	STAT5B STAT5A
AUGUGCC	1.203
RORA.p2	1.174	RORA
FOXQ1.p2	1.147	FOXQ1
RBPJ.p2	1.124	RBPJ
TGIF1.p2	1.086	TGIF1
POU5F1.p2	1.077	POU5F1
FOXL1.p2	1.060	FOXL1
GAUUGUC	1.001
ATF5_CREB3.p2	0.988	ATF5 CREB3
UCAAGUA	0.969
NFE2.p2	0.966	NFE2
MYBL2.p2	0.949	MYBL2
NKX6-1,2.p2	0.942	NKX6-1 NKX6-2
SREBF1,2.p2	0.940	SREBF1 SREBF2
GCUGGUG	0.925
NKX2-1,4.p2	0.912	NKX2-1 NKX2-4
ZFP161.p2	0.903	ZFP161
ZNF148.p2	0.881	ZNF148
AAAGUGC	0.869
TLX2.p2	0.867	TLX2
EHF.p2	0.833	EHF
LMO2.p2	0.833	LMO2
POU1F1.p2	0.813	POU1F1
TFAP4.p2	0.796	TFAP4
NR1H4.p2	0.779	NR1H4
FOXD3.p2	0.779	FOXD3
CDC5L.p2	0.773	CDC5L
ALX1.p2	0.755	ALX1
AAGGUGC	0.719
UUUUUGC	0.692
CAGUGCA	0.614
TFAP2B.p2	0.610	TFAP2B
PRRX1,2.p2	0.598	PRRX2 PRRX1
AGGUAGU	0.586
EGR1..3.p2	0.566	EGR3 EGR1 EGR2
AGCUGCC	0.548
AACCGUU	0.547
TAL1_TCF{3,4,12}.p2	0.542	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
EOMES.p2	0.536	EOMES
ZNF423.p2	0.534	ZNF423
FOX{C1,C2}.p2	0.501	FOXC1 FOXC2
FOXN1.p2	0.480	FOXN1
ONECUT1,2.p2	0.469	ONECUT2 ONECUT1
ACUGGCC	0.423
FOXP3.p2	0.418	FOXP3
TFDP1.p2	0.371	TFDP1
UAAUGCU	0.323
FOX{F1,F2,J1}.p2	0.319	FOXF2 FOXJ1 FOXF1
POU6F1.p2	0.317	POU6F1
POU2F1..3.p2	0.293	POU2F2 POU2F1 POU2F3
HAND1,2.p2	0.262	HAND1 HAND2
BPTF.p2	0.239	BPTF
PBX1.p2	0.219	PBX1
PAX4.p2	0.212	PAX4
NR3C1.p2	0.206	NR3C1
UGUGCGU	0.181
MYB.p2	0.155	MYB
GUGCAAA	0.134
HNF4A_NR2F1,2.p2	0.081	NR2F1 NR2F2 HNF4A
TFEB.p2	0.075	TFEB
UUGGCAC	0.075
UCACAGU	0.073
GFI1B.p2	0.062	GFI1B
PAX8.p2	0.061	PAX8
GZF1.p2	0.055	GZF1
AAUCUCA	0.050
SRY.p2	0.041	SRY
T.p2	0.026	T
UGACCUA	0.013
UAAGACU	-0.010
AGUGCAA	-0.014
SOX17.p2	-0.014	SOX17
AACACUG	-0.033
ACAGUAU	-0.044
ACCCGUA	-0.047
GUAAACA	-0.053
PDX1.p2	-0.055	PDX1
GGAAGAC	-0.056
ACCCUGU	-0.075
HBP1_HMGB_SSRP1_UBTF.p2	-0.083	HMGB2 HMGB3 SSRP1 UBTF HBP1
ARID5B.p2	-0.088	ARID5B
CUUUGGU	-0.101
AACAGUC	-0.128
HLF.p2	-0.129	HLF
PAX3,7.p2	-0.136	PAX7 PAX3
ESRRA.p2	-0.138	ESRRA
GUAACAG	-0.151
UGCAUUG	-0.153
AUGGCUU	-0.159
AUUGCAC	-0.163
AACCUGG	-0.172
UUGGCAA	-0.180
GGCAGUG	-0.199
UGCAUAG	-0.208
AAUCUCU	-0.254
AGCAGCA	-0.269
CGUACCG	-0.283
GAUAUGU	-0.287
E2F1..5.p2	-0.299	E2F4 E2F5 E2F2 E2F1 E2F3
EN1,2.p2	-0.322	EN1 EN2
UAAGACG	-0.368
UAUUGCU	-0.375
GATA6.p2	-0.376	GATA6
ADNP_IRX_SIX_ZHX.p2	-0.383	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CGUGUCU	-0.401
ZBTB6.p2	-0.404	ZBTB6
IKZF2.p2	-0.404	IKZF2
AUGACAC	-0.420
CAGCAGG	-0.436
ZEB1.p2	-0.437	ZEB1
GGACGGA	-0.447
AGCAGCG	-0.461
GUCAGUU	-0.469
CCUUCAU	-0.470
CRX.p2	-0.472	CRX
ACUGCAU	-0.478
SPZ1.p2	-0.509	SPZ1
PAX6.p2	-0.542	PAX6
HSF1,2.p2	-0.544	HSF1 HSF2
GCUACAU	-0.551
AR.p2	-0.560	AR
ATF4.p2	-0.564	ATF4
HNF1A.p2	-0.615	HNF1A
GUAGUGU	-0.620
HIC1.p2	-0.620	HIC1
AAGGCAC	-0.647
CCAGUGU	-0.653
AACGGAA	-0.678
DBP.p2	-0.680	DBP
AAUGCCC	-0.691
ZNF238.p2	-0.714	ZNF238
GGAGUGU	-0.726
FOSL2.p2	-0.739	FOSL2
JUN.p2	-0.764	JUN JUND JUNB
NFATC1..3.p2	-0.823	NFATC3 NFATC2 NFATC1
SOX2.p2	-0.854	SOX2
EBF1.p2	-0.869	EBF1
TFCP2.p2	-0.887	TFCP2
VSX1,2.p2	-0.893	VSX2 VSX1
AGCACCA	-0.896
NANOG.p2	-0.910	NANOG
GAUCAGA	-0.938
KLF12.p2	-0.939	KLF12
CCAGCAU	-0.940
bHLH_family.p2	-0.972	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NKX3-1.p2	-1.110	NKX3-1
SMAD1..7,9.p2	-1.120	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
CEBPA,B_DDIT3.p2	-1.155	DDIT3 CEBPA CEBPB
GGCAAGA	-1.164
UUGUUCG	-1.175
GATA1..3.p2	-1.196	GATA1 GATA2 GATA3
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.261	ARNT MAX MYC USF1 BHLHB2 ARNT2
UCCCUUU	-1.275
NHLH1,2.p2	-1.279	NHLH1 NHLH2
GAGAACU	-1.282
EVI1.p2	-1.301	EVI1
MSX1,2.p2	-1.319	MSX1 MSX2
NFIX.p2	-1.321	NFIX
GAGGUAG	-1.339
HIF1A.p2	-1.342	HIF1A
AGUGGUU	-1.395
HOX{A5,B5}.p2	-1.441	HOXB5 HOXA5
NANOG{mouse}.p2	-1.444	NANOG
POU3F1..4.p2	-1.455	POU3F1 POU3F3 POU3F2 POU3F4
NR6A1.p2	-1.469	NR6A1
GTF2I.p2	-1.499	GTF2I
UCCAGUU	-1.511
TFAP2{A,C}.p2	-1.514	TFAP2C TFAP2A
GFI1.p2	-1.534	GFI1
CACAGUG	-1.546
BACH2.p2	-1.559	BACH2
NFIL3.p2	-1.567	NFIL3
UGUGCUU	-1.578
MEF2{A,B,C,D}.p2	-1.620	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
POU5F1_SOX2{dimer}.p2	-1.631	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
CUACAGU	-1.656
ATF6.p2	-1.660	ATF6
ZNF384.p2	-1.696	ZNF384
EWSR1-FLI1.p2	-1.709	FLI1 EWSR1
ATF2.p2	-1.763	ATF2
NKX2-3_NKX2-5.p2	-1.787	NKX2-5 NKX2-3
UUGGUCC	-1.789
FOXO1,3,4.p2	-1.824	FOXO1 FOXO4 FOXO3
TP53.p2	-1.854	TP53
MYFfamily.p2	-1.872	MYOD1 MYF6 MYF5 MYOG
FOX{I1,J2}.p2	-1.874	FOXI1 FOXJ2
LEF1_TCF7_TCF7L1,2.p2	-1.883	TCF7 TCF7L2 LEF1 TCF7L1
STAT1,3.p3	-1.965	STAT1 STAT3
RXR{A,B,G}.p2	-1.965	RXRA RXRB RXRG
EP300.p2	-1.984	EP300
SP1.p2	-2.071	SP1
MTF1.p2	-2.079	MTF1
AAUACUG	-2.084
PAX5.p2	-2.140	PAX5
STAT2,4,6.p2	-2.162	STAT2 STAT4 STAT6
MYOD1.p2	-2.290	MYOD1
SOX{8,9,10}.p2	-2.304	SOX9 SOX8 SOX10
MZF1.p2	-2.358	MZF1
SRF.p3	-2.365	SRF
TEAD1.p2	-2.371	TEAD1 TEAD2 TEAD3 TEAD4
FOS_FOS{B,L1}_JUN{B,D}.p2	-2.445	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
TCF4_dimer.p2	-2.455	TCF4
UGAAAUG	-2.469
ZIC1..3.p2	-2.505	ZIC1 ZIC2 ZIC3
FOXA2.p3	-2.614	FOXA2
RREB1.p2	-2.647	RREB1
NR5A1,2.p2	-2.648	NR5A1 NR5A2
GTF2A1,2.p2	-2.679	GTF2A1 GTF2A2
HMGA1,2.p2	-2.716	HMGA1 HMGA2
NR4A2.p2	-2.756	NR4A2
NFE2L1.p2	-2.921	NFE2L1
IKZF1.p2	-3.171	IKZF1
XBP1.p3	-3.259	XBP1
REST.p3	-3.326	REST
TLX1..3_NFIC{dimer}.p2	-3.380	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ESR1.p2	-4.153	ESR1
RFX1..5_RFXANK_RFXAP.p2	-5.307	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
HOX{A6,A7,B6,B7}.p2	-5.401	HOXB6 HOXA7 HOXB7 HOXA6
TBP.p2	-6.120	TBP

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Sample name: GNF_2_PB-CD8+Tcells

Sorted z-values for every WM.