ISMARA results: GNF_2

Sample name: GNF_2_PLACENTA

Sorted Z-values histogram for the sample GNF_2_PLACENTA

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
TBP.p2	8.648	TBP
TEAD1.p2	7.590	TEAD1 TEAD2 TEAD3 TEAD4
TLX1..3_NFIC{dimer}.p2	6.390	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
TFAP2{A,C}.p2	6.313	TFAP2C TFAP2A
MYFfamily.p2	5.297	MYOD1 MYF6 MYF5 MYOG
XBP1.p3	4.883	XBP1
TFCP2.p2	4.561	TFCP2
CUUUGGU	4.252
KLF4.p3	4.218	KLF4
HIC1.p2	3.661	HIC1
ATF6.p2	3.619	ATF6
FOX{D1,D2}.p2	3.576	FOXD2 FOXD1
NKX3-1.p2	3.355	NKX3-1
NFE2L1.p2	3.056	NFE2L1
FOSL2.p2	2.899	FOSL2
AGCACCA	2.875
ETS1,2.p2	2.722	ETS2 ETS1
TGIF1.p2	2.713	TGIF1
GAGGUAG	2.689
RXR{A,B,G}.p2	2.685	RXRA RXRB RXRG
GTF2A1,2.p2	2.633	GTF2A1 GTF2A2
TFAP4.p2	2.570	TFAP4
FOS_FOS{B,L1}_JUN{B,D}.p2	2.447	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ZNF238.p2	2.435	ZNF238
HBP1_HMGB_SSRP1_UBTF.p2	2.428	HMGB2 HMGB3 SSRP1 UBTF HBP1
ESR1.p2	2.414	ESR1
STAT2,4,6.p2	2.406	STAT2 STAT4 STAT6
FOXO1,3,4.p2	2.401	FOXO1 FOXO4 FOXO3
FOX{C1,C2}.p2	2.316	FOXC1 FOXC2
FEV.p2	2.315	FEV
AUUGCAC	2.243
GLI1..3.p2	2.227	GLI1 GLI2 GLI3
MSX1,2.p2	2.178	MSX1 MSX2
SPZ1.p2	2.118	SPZ1
SREBF1,2.p2	2.046	SREBF1 SREBF2
AAGGCAC	1.929
SRF.p3	1.816	SRF
NFATC1..3.p2	1.752	NFATC3 NFATC2 NFATC1
EN1,2.p2	1.715	EN1 EN2
AAUACUG	1.709
TFEB.p2	1.697	TFEB
STAT1,3.p3	1.672	STAT1 STAT3
CCCUGAG	1.647
NANOG{mouse}.p2	1.561	NANOG
EP300.p2	1.559	EP300
CRX.p2	1.546	CRX
POU5F1_SOX2{dimer}.p2	1.414	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GGAAGAC	1.413
CAGCAGG	1.400
SMAD1..7,9.p2	1.387	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
GGCUCAG	1.374
AGCUUAU	1.363
GGCAAGA	1.342
GUAGUGU	1.319
LHX3,4.p2	1.305	LHX3 LHX4
EOMES.p2	1.303	EOMES
ZFP161.p2	1.294	ZFP161
EBF1.p2	1.255	EBF1
HOX{A5,B5}.p2	1.252	HOXB5 HOXA5
ZNF384.p2	1.215	ZNF384
VSX1,2.p2	1.187	VSX2 VSX1
CUCCCAA	1.156
SNAI1..3.p2	1.153	SNAI2 SNAI1 SNAI3
CCAGUGU	1.146
HAND1,2.p2	1.141	HAND1 HAND2
EVI1.p2	1.129	EVI1
BPTF.p2	1.109	BPTF
ACAGUAU	1.091
SOX{8,9,10}.p2	1.089	SOX9 SOX8 SOX10
NKX6-1,2.p2	1.069	NKX6-1 NKX6-2
UAAUGCU	1.055
PPARG.p2	1.051	PPARG
GGACGGA	1.047
RORA.p2	1.029	RORA
UUGGCAC	1.000
ZEB1.p2	0.993	ZEB1
HOXA9_MEIS1.p2	0.991	MEIS1 HOXA9
EWSR1-FLI1.p2	0.966	FLI1 EWSR1
GGAAUGU	0.963
KLF12.p2	0.938	KLF12
NR5A1,2.p2	0.906	NR5A1 NR5A2
ZNF148.p2	0.892	ZNF148
SPIB.p2	0.890	SPIB
FOXD3.p2	0.886	FOXD3
GAGAUGA	0.829
TP53.p2	0.816	TP53
GGAGUGU	0.813
NANOG.p2	0.769	NANOG
ZBTB6.p2	0.737	ZBTB6
MZF1.p2	0.733	MZF1
CCAGCAU	0.722
AGUGGUU	0.713
ACUGGCC	0.689
UCCAGUU	0.684
AAGGUGC	0.666
NR3C1.p2	0.654	NR3C1
GUGCAAA	0.647
NFE2.p2	0.624	NFE2
TCF4_dimer.p2	0.608	TCF4
CACAGUG	0.603
GAGAACU	0.569
TBX4,5.p2	0.519	TBX5 TBX4
NFKB1_REL_RELA.p2	0.500	RELA REL NFKB1
CGUACCG	0.497
LEF1_TCF7_TCF7L1,2.p2	0.494	TCF7 TCF7L2 LEF1 TCF7L1
ZNF423.p2	0.473	ZNF423
GFI1.p2	0.451	GFI1
CGUGUCU	0.430
CDC5L.p2	0.412	CDC5L
GCUACAU	0.408
GTF2I.p2	0.401	GTF2I
HOX{A6,A7,B6,B7}.p2	0.399	HOXB6 HOXA7 HOXB7 HOXA6
POU3F1..4.p2	0.383	POU3F1 POU3F3 POU3F2 POU3F4
NFIX.p2	0.377	NFIX
POU1F1.p2	0.370	POU1F1
AGCAGCG	0.354
NKX2-3_NKX2-5.p2	0.353	NKX2-5 NKX2-3
NR4A2.p2	0.351	NR4A2
CAGUGCA	0.333
PAX4.p2	0.323	PAX4
HNF4A_NR2F1,2.p2	0.322	NR2F1 NR2F2 HNF4A
AR.p2	0.319	AR
CCUUCAU	0.311
JUN.p2	0.305	JUN JUND JUNB
SPI1.p2	0.281	SPI1
AACACUG	0.273
UUGGUCC	0.260
UGUGCGU	0.247
PATZ1.p2	0.235	PATZ1
DMAP1_NCOR{1,2}_SMARC.p2	0.211	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
POU6F1.p2	0.203	POU6F1
MAZ.p2	0.192	MAZ
NKX3-2.p2	0.192	NKX3-2
ATF2.p2	0.184	ATF2
AAUGCCC	0.170
AUGUGCC	0.160
NR6A1.p2	0.159	NR6A1
PITX1..3.p2	0.135	PITX2 PITX3 PITX1
GAUCAGA	0.131
PDX1.p2	0.130	PDX1
T.p2	0.128	T
AACCGUU	0.094
UUGGCAA	0.084
GZF1.p2	0.079	GZF1
GATA1..3.p2	0.077	GATA1 GATA2 GATA3
UGCAUUG	0.072
UGACCUA	0.061
FOXP3.p2	0.037	FOXP3
MEF2{A,B,C,D}.p2	0.005	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GATA6.p2	0.002	GATA6
ACCCGUA	0.001
TAL1_TCF{3,4,12}.p2	-0.003	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
AUGACAC	-0.004
PAX3,7.p2	-0.014	PAX7 PAX3
AACGGAA	-0.025
POU5F1.p2	-0.036	POU5F1
GUCAGUU	-0.050
AIRE.p2	-0.058	AIRE
UAAGACU	-0.071
NFIL3.p2	-0.079	NFIL3
FOX{I1,J2}.p2	-0.092	FOXI1 FOXJ2
FOXN1.p2	-0.102	FOXN1
HSF1,2.p2	-0.104	HSF1 HSF2
GGCAGUG	-0.116
ACUGCAU	-0.125
POU2F1..3.p2	-0.133	POU2F2 POU2F1 POU2F3
SP1.p2	-0.143	SP1
AGCAGCA	-0.154
AAAGUGC	-0.163
ONECUT1,2.p2	-0.167	ONECUT2 ONECUT1
PAX8.p2	-0.182	PAX8
UCACAGU	-0.186
CEBPA,B_DDIT3.p2	-0.239	DDIT3 CEBPA CEBPB
RXRA_VDR{dimer}.p2	-0.274	VDR	$logo of RXRA_VDR{dimer}.p2$
RBPJ.p2	-0.277	RBPJ
PAX6.p2	-0.286	PAX6
ACAGUAC	-0.295
MYOD1.p2	-0.298	MYOD1
GAUAUGU	-0.341
FOXQ1.p2	-0.342	FOXQ1
TFAP2B.p2	-0.402	TFAP2B
UCACAUU	-0.439
GCAGCAU	-0.450
AAUCUCA	-0.450
PRDM1.p3	-0.477	PRDM1
AACCUGG	-0.478
ARID5B.p2	-0.496	ARID5B
ACCCUGU	-0.544
IKZF2.p2	-0.581	IKZF2
AAUCUCU	-0.588
UCCCUUU	-0.678
UAAGACG	-0.687
HES1.p2	-0.698	HES1
FOXA2.p3	-0.714	FOXA2
CUX2.p2	-0.726	CUX2
HMX1.p2	-0.729	HMX1
HNF1A.p2	-0.733	HNF1A
HMGA1,2.p2	-0.761	HMGA1 HMGA2
IKZF1.p2	-0.764	IKZF1
RXRG_dimer.p3	-0.796	NR1H2 RXRA PPARG PPARA RXRB RXRG
ATF4.p2	-0.818	ATF4
IRF1,2,7.p3	-0.838	IRF1 IRF2 IRF7
CUACAGU	-0.859
GAUUGUC	-0.921
GFI1B.p2	-0.952	GFI1B
STAT5{A,B}.p2	-0.973	STAT5B STAT5A
TLX2.p2	-0.989	TLX2
TFDP1.p2	-1.007	TFDP1
DBP.p2	-1.010	DBP
CDX1,2,4.p2	-1.020	CDX1 CDX2 CDX4
GCUGGUG	-1.024
ZIC1..3.p2	-1.044	ZIC1 ZIC2 ZIC3
HLF.p2	-1.053	HLF
AUGGCUU	-1.100
AGGUAGU	-1.126
UCAAGUA	-1.128
PBX1.p2	-1.147	PBX1
FOXL1.p2	-1.153	FOXL1
EGR1..3.p2	-1.160	EGR3 EGR1 EGR2
PRRX1,2.p2	-1.172	PRRX2 PRRX1
NKX2-1,4.p2	-1.185	NKX2-1 NKX2-4
AHR_ARNT_ARNT2.p2	-1.200	ARNT AHR ARNT2
SRY.p2	-1.202	SRY
RREB1.p2	-1.221	RREB1
AUGGCAC	-1.274
AAGUGCU	-1.294
UUGUUCG	-1.319
AGCUGCC	-1.342
ATF5_CREB3.p2	-1.350	ATF5 CREB3
bHLH_family.p2	-1.429	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
UGAAAUG	-1.444
BACH2.p2	-1.444	BACH2
MTF1.p2	-1.507	MTF1
CREB1.p2	-1.524	CREB1
CTCF.p2	-1.531	CTCF
ALX1.p2	-1.549	ALX1
MYBL2.p2	-1.589	MYBL2
NKX2-2,8.p2	-1.622	NKX2-2 NKX2-8
AACAGUC	-1.625
HOX{A4,D4}.p2	-1.637	HOXA4 HOXD4
ACAUUCA	-1.660
SOX17.p2	-1.681	SOX17
REST.p3	-1.707	REST
NHLH1,2.p2	-1.712	NHLH1 NHLH2
NFE2L2.p2	-1.712	NFE2L2
SOX2.p2	-1.723	SOX2
PAX2.p2	-1.774	PAX2
UGCAUAG	-1.782
AGUGCAA	-1.872
GUAACAG	-1.883
LMO2.p2	-1.890	LMO2
SOX5.p2	-1.913	SOX5
ELF1,2,4.p2	-1.930	ELF2 ELF1 ELF4
NR1H4.p2	-1.965	NR1H4
RUNX1..3.p2	-2.003	RUNX1 RUNX3 RUNX2
UAUUGCU	-2.003
MAFB.p2	-2.139	MAFB
FOX{F1,F2,J1}.p2	-2.160	FOXF2 FOXJ1 FOXF1
PAX5.p2	-2.412	PAX5
EHF.p2	-2.437	EHF
GUAAACA	-2.446
ADNP_IRX_SIX_ZHX.p2	-2.462	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
ESRRA.p2	-2.846	ESRRA
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.033	ARNT MAX MYC USF1 BHLHB2 ARNT2
RFX1..5_RFXANK_RFXAP.p2	-3.347	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
ELK1,4_GABP{A,B1}.p3	-3.379	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
UUUUUGC	-3.383
HIF1A.p2	-3.418	HIF1A
UGUGCUU	-3.552
ZBTB16.p2	-3.724	ZBTB16
NRF1.p2	-3.819	NRF1
NFY{A,B,C}.p2	-4.327	NFYC NFYB NFYA
MYB.p2	-4.437	MYB
YY1.p2	-5.695	YY1
E2F1..5.p2	-6.720	E2F4 E2F5 E2F2 E2F1 E2F3
ZNF143.p2	-6.902	ZNF143

ISMARA

Project

Navigation

Downloads

Sample name: GNF_2_PLACENTA

Sorted z-values for every WM.