ISMARA results: GNF_2_PrefrontalCortex

Sample name: GNF_2_PrefrontalCortex

Sorted Z-values histogram for the sample GNF_2_PrefrontalCortex

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	6.261	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
KLF12.p2	5.840	KLF12
REST.p3	5.464	REST
CUCCCAA	5.239
HIC1.p2	4.959	HIC1
HOX{A6,A7,B6,B7}.p2	4.804	HOXB6 HOXA7 HOXB7 HOXA6
GATA1..3.p2	4.666	GATA1 GATA2 GATA3
JUN.p2	4.588	JUN JUND JUNB
GGCAGUG	4.489
CAGCAGG	4.459
TGIF1.p2	4.190	TGIF1
ZFP161.p2	4.139	ZFP161
UGUGCUU	4.127
MAFB.p2	4.012	MAFB
EGR1..3.p2	3.994	EGR3 EGR1 EGR2
NHLH1,2.p2	3.886	NHLH1 NHLH2
GUGCAAA	3.587
MAZ.p2	3.441	MAZ
IKZF2.p2	3.401	IKZF2
ZIC1..3.p2	3.331	ZIC1 ZIC2 ZIC3
AAUACUG	3.302
MYOD1.p2	3.265	MYOD1
FOX{I1,J2}.p2	3.263	FOXI1 FOXJ2
MTF1.p2	3.207	MTF1
GTF2I.p2	3.112	GTF2I
DBP.p2	3.095	DBP
MZF1.p2	3.034	MZF1
GCUGGUG	3.027
MEF2{A,B,C,D}.p2	2.905	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
PAX4.p2	2.892	PAX4
POU5F1.p2	2.830	POU5F1
UGCAUAG	2.824
ATF2.p2	2.818	ATF2
CTCF.p2	2.763	CTCF
ACAUUCA	2.712
GGCUCAG	2.672
TAL1_TCF{3,4,12}.p2	2.658	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
LMO2.p2	2.620	LMO2
UUGGUCC	2.574
RREB1.p2	2.496	RREB1
SOX2.p2	2.458	SOX2
TCF4_dimer.p2	2.457	TCF4
SRY.p2	2.419	SRY
GGAAGAC	2.393
TFCP2.p2	2.309	TFCP2
GUCAGUU	2.290
SP1.p2	2.286	SP1
STAT2,4,6.p2	2.268	STAT2 STAT4 STAT6
AUGGCUU	2.179
TBX4,5.p2	2.156	TBX5 TBX4
ALX1.p2	2.058	ALX1
FEV.p2	1.988	FEV
HOX{A5,B5}.p2	1.969	HOXB5 HOXA5
ZBTB6.p2	1.963	ZBTB6
RXRA_VDR{dimer}.p2	1.870	VDR	$logo of RXRA_VDR{dimer}.p2$
AUUGCAC	1.856
AGUGCAA	1.829
TFEB.p2	1.821	TFEB
FOX{D1,D2}.p2	1.816	FOXD2 FOXD1
GCUACAU	1.726
TLX1..3_NFIC{dimer}.p2	1.654	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
PAX2.p2	1.636	PAX2
TFAP2B.p2	1.608	TFAP2B
GUAAACA	1.588
ESRRA.p2	1.533	ESRRA
SPZ1.p2	1.499	SPZ1
FOXO1,3,4.p2	1.483	FOXO1 FOXO4 FOXO3
EWSR1-FLI1.p2	1.440	FLI1 EWSR1
HMX1.p2	1.424	HMX1
SOX{8,9,10}.p2	1.419	SOX9 SOX8 SOX10
NKX2-3_NKX2-5.p2	1.360	NKX2-5 NKX2-3
GGCAAGA	1.335
EVI1.p2	1.292	EVI1
HBP1_HMGB_SSRP1_UBTF.p2	1.291	HMGB2 HMGB3 SSRP1 UBTF HBP1
ESR1.p2	1.251	ESR1
AACAGUC	1.211
AGCAGCA	1.149
RXR{A,B,G}.p2	1.132	RXRA RXRB RXRG
CCAGCAU	1.130
AAGUGCU	1.113
SMAD1..7,9.p2	1.108	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
UUUUUGC	1.057
SREBF1,2.p2	1.054	SREBF1 SREBF2
IKZF1.p2	1.034	IKZF1
UAUUGCU	1.027
AAAGUGC	1.014
UAAGACG	1.003
AUGGCAC	1.000
FOXP3.p2	0.982	FOXP3
NFE2L1.p2	0.965	NFE2L1
UUGGCAC	0.964
NR3C1.p2	0.931	NR3C1
AAGGUGC	0.913
EBF1.p2	0.871	EBF1
GAUCAGA	0.860
HAND1,2.p2	0.820	HAND1 HAND2
CUX2.p2	0.779	CUX2
GFI1.p2	0.738	GFI1
GTF2A1,2.p2	0.714	GTF2A1 GTF2A2
FOX{F1,F2,J1}.p2	0.691	FOXF2 FOXJ1 FOXF1
UCCCUUU	0.685
AGCUUAU	0.679
CAGUGCA	0.667
GGACGGA	0.655
NFIL3.p2	0.636	NFIL3
GFI1B.p2	0.632	GFI1B
POU6F1.p2	0.631	POU6F1
AGCAGCG	0.629
CDC5L.p2	0.605	CDC5L
PRRX1,2.p2	0.588	PRRX2 PRRX1
UGUGCGU	0.541
PAX3,7.p2	0.528	PAX7 PAX3
UCACAGU	0.515
LHX3,4.p2	0.497	LHX3 LHX4
GAGAACU	0.489
FOS_FOS{B,L1}_JUN{B,D}.p2	0.487	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NR1H4.p2	0.469	NR1H4
SOX5.p2	0.458	SOX5
CUACAGU	0.453
HMGA1,2.p2	0.442	HMGA1 HMGA2
UAAGACU	0.420
RORA.p2	0.405	RORA
STAT1,3.p3	0.397	STAT1 STAT3
TFAP2{A,C}.p2	0.391	TFAP2C TFAP2A
NKX6-1,2.p2	0.388	NKX6-1 NKX6-2
PBX1.p2	0.373	PBX1
NKX2-1,4.p2	0.361	NKX2-1 NKX2-4
AGCUGCC	0.340
CDX1,2,4.p2	0.329	CDX1 CDX2 CDX4
NKX3-2.p2	0.327	NKX3-2
NR5A1,2.p2	0.323	NR5A1 NR5A2
CGUGUCU	0.300
NFIX.p2	0.300	NFIX
UUGGCAA	0.290
PAX6.p2	0.284	PAX6
ACUGCAU	0.245
ZNF148.p2	0.240	ZNF148
NR4A2.p2	0.224	NR4A2
GZF1.p2	0.213	GZF1
NKX2-2,8.p2	0.204	NKX2-2 NKX2-8
GCAGCAU	0.203
NR6A1.p2	0.203	NR6A1
LEF1_TCF7_TCF7L1,2.p2	0.157	TCF7 TCF7L2 LEF1 TCF7L1
GLI1..3.p2	0.152	GLI1 GLI2 GLI3
AGUGGUU	0.146
POU5F1_SOX2{dimer}.p2	0.122	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOXL1.p2	0.106	FOXL1
GAGAUGA	0.082
POU3F1..4.p2	0.079	POU3F1 POU3F3 POU3F2 POU3F4
TEAD1.p2	0.076	TEAD1 TEAD2 TEAD3 TEAD4
CGUACCG	0.066
AUGACAC	0.053
EN1,2.p2	0.039	EN1 EN2
ARID5B.p2	0.035	ARID5B
SNAI1..3.p2	0.020	SNAI2 SNAI1 SNAI3
NFATC1..3.p2	0.000	NFATC3 NFATC2 NFATC1
CACAGUG	-0.006
CEBPA,B_DDIT3.p2	-0.007	DDIT3 CEBPA CEBPB
AACCUGG	-0.028
PAX8.p2	-0.032	PAX8
NFE2.p2	-0.037	NFE2
GAUAUGU	-0.048
ACCCGUA	-0.061
ATF4.p2	-0.069	ATF4
AACCGUU	-0.070
AR.p2	-0.075	AR
EOMES.p2	-0.089	EOMES
GGAAUGU	-0.093
RUNX1..3.p2	-0.104	RUNX1 RUNX3 RUNX2
UGCAUUG	-0.107
PDX1.p2	-0.118	PDX1
GUAGUGU	-0.118
AIRE.p2	-0.161	AIRE
STAT5{A,B}.p2	-0.162	STAT5B STAT5A
ACUGGCC	-0.168
NKX3-1.p2	-0.176	NKX3-1
FOXN1.p2	-0.180	FOXN1
AACACUG	-0.201
AACGGAA	-0.259
MYFfamily.p2	-0.262	MYOD1 MYF6 MYF5 MYOG
UCCAGUU	-0.279
RBPJ.p2	-0.285	RBPJ
PRDM1.p3	-0.288	PRDM1
AAUGCCC	-0.292
GUAACAG	-0.293
HOXA9_MEIS1.p2	-0.297	MEIS1 HOXA9
UGACCUA	-0.334
AAUCUCU	-0.367
VSX1,2.p2	-0.375	VSX2 VSX1
HES1.p2	-0.381	HES1
RXRG_dimer.p3	-0.381	NR1H2 RXRA PPARG PPARA RXRB RXRG
AGGUAGU	-0.387
HNF4A_NR2F1,2.p2	-0.390	NR2F1 NR2F2 HNF4A
MYBL2.p2	-0.398	MYBL2
UUGUUCG	-0.402
UGAAAUG	-0.421
T.p2	-0.439	T
AAUCUCA	-0.512
ZNF143.p2	-0.538	ZNF143
FOSL2.p2	-0.541	FOSL2
MSX1,2.p2	-0.546	MSX1 MSX2
HOX{A4,D4}.p2	-0.582	HOXA4 HOXD4
GGAGUGU	-0.599
HLF.p2	-0.599	HLF
CCUUCAU	-0.638
ACCCUGU	-0.647
ZNF423.p2	-0.683	ZNF423
NANOG{mouse}.p2	-0.683	NANOG
ZNF384.p2	-0.708	ZNF384
ZEB1.p2	-0.735	ZEB1
FOX{C1,C2}.p2	-0.741	FOXC1 FOXC2
ACAGUAC	-0.771
HSF1,2.p2	-0.794	HSF1 HSF2
ETS1,2.p2	-0.801	ETS2 ETS1
TLX2.p2	-0.810	TLX2
FOXQ1.p2	-0.811	FOXQ1
ONECUT1,2.p2	-0.813	ONECUT2 ONECUT1
UCACAUU	-0.849
NANOG.p2	-0.860	NANOG
CRX.p2	-0.862	CRX
POU1F1.p2	-0.925	POU1F1
ADNP_IRX_SIX_ZHX.p2	-0.933	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CCAGUGU	-1.037
GAUUGUC	-1.091
AUGUGCC	-1.103
CCCUGAG	-1.161
PAX5.p2	-1.184	PAX5
NRF1.p2	-1.328	NRF1
NFE2L2.p2	-1.349	NFE2L2
PPARG.p2	-1.410	PPARG
TFAP4.p2	-1.424	TFAP4
CREB1.p2	-1.506	CREB1
GAGGUAG	-1.523
SPIB.p2	-1.675	SPIB
AGCACCA	-1.707
CUUUGGU	-1.717
BACH2.p2	-1.742	BACH2
HNF1A.p2	-1.745	HNF1A
ACAGUAU	-1.804
TP53.p2	-1.824	TP53
ATF6.p2	-1.874	ATF6
UAAUGCU	-1.977
PITX1..3.p2	-1.979	PITX2 PITX3 PITX1
ZNF238.p2	-1.986	ZNF238
GATA6.p2	-2.012	GATA6
bHLH_family.p2	-2.090	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
PATZ1.p2	-2.101	PATZ1
HIF1A.p2	-2.135	HIF1A
BPTF.p2	-2.163	BPTF
ATF5_CREB3.p2	-2.279	ATF5 CREB3
IRF1,2,7.p3	-2.366	IRF1 IRF2 IRF7
EHF.p2	-2.384	EHF
UCAAGUA	-2.433
FOXD3.p2	-2.465	FOXD3
DMAP1_NCOR{1,2}_SMARC.p2	-2.566	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
AHR_ARNT_ARNT2.p2	-2.605	ARNT AHR ARNT2
ZBTB16.p2	-2.626	ZBTB16
FOXA2.p3	-2.645	FOXA2
KLF4.p3	-2.695	KLF4
SOX17.p2	-2.699	SOX17
POU2F1..3.p2	-2.730	POU2F2 POU2F1 POU2F3
TBP.p2	-3.171	TBP
ELK1,4_GABP{A,B1}.p3	-3.388	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
NFKB1_REL_RELA.p2	-3.579	RELA REL NFKB1
EP300.p2	-3.661	EP300
NFY{A,B,C}.p2	-3.730	NFYC NFYB NFYA
SRF.p3	-3.804	SRF
AAGGCAC	-3.853
XBP1.p3	-3.855	XBP1
MYB.p2	-4.027	MYB
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.059	ARNT MAX MYC USF1 BHLHB2 ARNT2
SPI1.p2	-4.297	SPI1
TFDP1.p2	-4.583	TFDP1
YY1.p2	-5.025	YY1
ELF1,2,4.p2	-5.772	ELF2 ELF1 ELF4
E2F1..5.p2	-5.993	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: GNF_2_PrefrontalCortex

Sorted z-values for every WM.