ISMARA results: GNF_2

Sample name: GNF_2_UterusCorpus

Sorted Z-values histogram for the sample GNF_2_UterusCorpus

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RREB1.p2	5.492	RREB1
CUCCCAA	5.325
SRF.p3	5.086	SRF
MYFfamily.p2	4.610	MYOD1 MYF6 MYF5 MYOG
TBP.p2	4.457	TBP
STAT1,3.p3	4.319	STAT1 STAT3
KLF12.p2	3.375	KLF12
GAGGUAG	3.354
FOSL2.p2	3.312	FOSL2
JUN.p2	3.312	JUN JUND JUNB
ZNF238.p2	3.295	ZNF238
GATA1..3.p2	3.291	GATA1 GATA2 GATA3
TGIF1.p2	3.212	TGIF1
RXR{A,B,G}.p2	2.982	RXRA RXRB RXRG
GTF2A1,2.p2	2.848	GTF2A1 GTF2A2
TFAP2{A,C}.p2	2.839	TFAP2C TFAP2A
SMAD1..7,9.p2	2.803	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
HBP1_HMGB_SSRP1_UBTF.p2	2.777	HMGB2 HMGB3 SSRP1 UBTF HBP1
LEF1_TCF7_TCF7L1,2.p2	2.756	TCF7 TCF7L2 LEF1 TCF7L1
TFEB.p2	2.697	TFEB
TFCP2.p2	2.688	TFCP2
GATA6.p2	2.653	GATA6
TEAD1.p2	2.617	TEAD1 TEAD2 TEAD3 TEAD4
GGCUCAG	2.601
MZF1.p2	2.563	MZF1
NANOG{mouse}.p2	2.560	NANOG
UUUUUGC	2.514
AAAGUGC	2.469
CACAGUG	2.311
NR3C1.p2	2.288	NR3C1
MAZ.p2	2.286	MAZ
NR1H4.p2	2.281	NR1H4
FOX{C1,C2}.p2	2.255	FOXC1 FOXC2
STAT2,4,6.p2	2.229	STAT2 STAT4 STAT6
CCAGCAU	2.203
HNF1A.p2	2.166	HNF1A
HIC1.p2	2.162	HIC1
TLX1..3_NFIC{dimer}.p2	2.150	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
HNF4A_NR2F1,2.p2	2.143	NR2F1 NR2F2 HNF4A
MSX1,2.p2	2.133	MSX1 MSX2
MTF1.p2	2.118	MTF1
EVI1.p2	2.111	EVI1
CCCUGAG	2.098
ALX1.p2	2.071	ALX1
POU1F1.p2	2.058	POU1F1
PITX1..3.p2	2.020	PITX2 PITX3 PITX1
ZIC1..3.p2	2.004	ZIC1 ZIC2 ZIC3
RORA.p2	1.979	RORA
MYOD1.p2	1.967	MYOD1
FOXO1,3,4.p2	1.949	FOXO1 FOXO4 FOXO3
AAGGCAC	1.911
RFX1..5_RFXANK_RFXAP.p2	1.847	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
POU3F1..4.p2	1.837	POU3F1 POU3F3 POU3F2 POU3F4
HOX{A5,B5}.p2	1.822	HOXB5 HOXA5
FEV.p2	1.785	FEV
ATF6.p2	1.749	ATF6
GTF2I.p2	1.734	GTF2I
FOX{D1,D2}.p2	1.704	FOXD2 FOXD1
RBPJ.p2	1.699	RBPJ
UGAAAUG	1.692
FOXP3.p2	1.652	FOXP3
CAGCAGG	1.648
MYBL2.p2	1.620	MYBL2
UGCAUAG	1.593
ZEB1.p2	1.590	ZEB1
NFATC1..3.p2	1.531	NFATC3 NFATC2 NFATC1
UCCCUUU	1.521
NFIL3.p2	1.512	NFIL3
AGCACCA	1.507
HAND1,2.p2	1.500	HAND1 HAND2
NFKB1_REL_RELA.p2	1.497	RELA REL NFKB1
EN1,2.p2	1.463	EN1 EN2
FOS_FOS{B,L1}_JUN{B,D}.p2	1.447	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ONECUT1,2.p2	1.420	ONECUT2 ONECUT1
GAGAACU	1.418
LHX3,4.p2	1.402	LHX3 LHX4
NKX2-1,4.p2	1.390	NKX2-1 NKX2-4
GGCAGUG	1.369
HMGA1,2.p2	1.369	HMGA1 HMGA2
RUNX1..3.p2	1.359	RUNX1 RUNX3 RUNX2
MEF2{A,B,C,D}.p2	1.356	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
EBF1.p2	1.238	EBF1
POU5F1.p2	1.221	POU5F1
TCF4_dimer.p2	1.221	TCF4
REST.p3	1.207	REST
IKZF2.p2	1.204	IKZF2
NANOG.p2	1.202	NANOG
TFAP4.p2	1.128	TFAP4
POU6F1.p2	1.118	POU6F1
NFE2L1.p2	1.109	NFE2L1
ESR1.p2	1.101	ESR1
CUUUGGU	1.056
UUGUUCG	1.050
GGAAGAC	1.045
UAAGACU	1.037
AGCUGCC	1.026
EOMES.p2	1.000	EOMES
HOXA9_MEIS1.p2	0.991	MEIS1 HOXA9
TLX2.p2	0.982	TLX2
CCAGUGU	0.961
NHLH1,2.p2	0.949	NHLH1 NHLH2
NFIX.p2	0.921	NFIX
UGCAUUG	0.860
DBP.p2	0.853	DBP
POU5F1_SOX2{dimer}.p2	0.834	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GAGAUGA	0.833
PAX2.p2	0.817	PAX2
GGCAAGA	0.808
AIRE.p2	0.787	AIRE
CGUGUCU	0.784
NR6A1.p2	0.748	NR6A1
HMX1.p2	0.716	HMX1
ETS1,2.p2	0.687	ETS2 ETS1
UAUUGCU	0.668
EGR1..3.p2	0.656	EGR3 EGR1 EGR2
GAUCAGA	0.649
SNAI1..3.p2	0.617	SNAI2 SNAI1 SNAI3
POU2F1..3.p2	0.569	POU2F2 POU2F1 POU2F3
EP300.p2	0.563	EP300
FOXA2.p3	0.561	FOXA2
GLI1..3.p2	0.555	GLI1 GLI2 GLI3
UGUGCUU	0.548
HSF1,2.p2	0.534	HSF1 HSF2
ACCCUGU	0.522
AGCAGCG	0.503
AAUCUCU	0.500
UAAUGCU	0.472
PDX1.p2	0.465	PDX1
SREBF1,2.p2	0.453	SREBF1 SREBF2
FOXL1.p2	0.441	FOXL1
AAGUGCU	0.439
AAUGCCC	0.426
NKX6-1,2.p2	0.420	NKX6-1 NKX6-2
SPZ1.p2	0.387	SPZ1
CGUACCG	0.384
VSX1,2.p2	0.369	VSX2 VSX1
ZNF384.p2	0.358	ZNF384
ZNF423.p2	0.314	ZNF423
CUACAGU	0.304
GUAAACA	0.275
ZBTB6.p2	0.268	ZBTB6
AR.p2	0.261	AR
AUGUGCC	0.259
AUGGCUU	0.253
AUGACAC	0.243
SRY.p2	0.243	SRY
UAAGACG	0.229
UUGGCAC	0.177
GUAGUGU	0.139
CAGUGCA	0.133
AGCUUAU	0.130
PAX8.p2	0.105	PAX8
NFE2.p2	0.103	NFE2
UUGGUCC	0.084
PAX3,7.p2	0.039	PAX7 PAX3
GGAGUGU	0.033
ACCCGUA	-0.035
AACCUGG	-0.036
ADNP_IRX_SIX_ZHX.p2	-0.049	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
AGGUAGU	-0.059
CTCF.p2	-0.066	CTCF
GAUAUGU	-0.068
AAUACUG	-0.076
PAX6.p2	-0.085	PAX6
AACACUG	-0.087
AACAGUC	-0.099
ATF2.p2	-0.099	ATF2
CCUUCAU	-0.105
GGACGGA	-0.113
AGCAGCA	-0.128
UGUGCGU	-0.133
ACAUUCA	-0.154
AACGGAA	-0.166
FOX{F1,F2,J1}.p2	-0.197	FOXF2 FOXJ1 FOXF1
NKX2-3_NKX2-5.p2	-0.214	NKX2-5 NKX2-3
GZF1.p2	-0.218	GZF1
GAUUGUC	-0.224
RXRA_VDR{dimer}.p2	-0.240	VDR	$logo of RXRA_VDR{dimer}.p2$
AAUCUCA	-0.241
AAGGUGC	-0.257
GCUACAU	-0.258
GUGCAAA	-0.276
HLF.p2	-0.283	HLF
PRDM1.p3	-0.298	PRDM1
GUAACAG	-0.355
ACUGGCC	-0.361
AACCGUU	-0.408
UGACCUA	-0.428
T.p2	-0.434	T
ACUGCAU	-0.434
SOX17.p2	-0.481	SOX17
NR4A2.p2	-0.485	NR4A2
SPIB.p2	-0.486	SPIB
CRX.p2	-0.512	CRX
NKX3-2.p2	-0.512	NKX3-2
FOX{I1,J2}.p2	-0.513	FOXI1 FOXJ2
HOX{A6,A7,B6,B7}.p2	-0.535	HOXB6 HOXA7 HOXB7 HOXA6
GFI1B.p2	-0.587	GFI1B
TBX4,5.p2	-0.614	TBX5 TBX4
FOXD3.p2	-0.638	FOXD3
AHR_ARNT_ARNT2.p2	-0.650	ARNT AHR ARNT2
UCACAGU	-0.665
SOX2.p2	-0.755	SOX2
STAT5{A,B}.p2	-0.811	STAT5B STAT5A
CDC5L.p2	-0.819	CDC5L
GFI1.p2	-0.851	GFI1
ACAGUAU	-0.859
PRRX1,2.p2	-0.900	PRRX2 PRRX1
GCUGGUG	-0.905
NKX3-1.p2	-0.922	NKX3-1
CEBPA,B_DDIT3.p2	-0.961	DDIT3 CEBPA CEBPB
AUUGCAC	-0.971
ARID5B.p2	-0.972	ARID5B
CUX2.p2	-0.972	CUX2
TP53.p2	-0.982	TP53
NR5A1,2.p2	-0.993	NR5A1 NR5A2
SPI1.p2	-1.014	SPI1
HOX{A4,D4}.p2	-1.036	HOXA4 HOXD4
TAL1_TCF{3,4,12}.p2	-1.081	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
IKZF1.p2	-1.103	IKZF1
PPARG.p2	-1.132	PPARG
DMAP1_NCOR{1,2}_SMARC.p2	-1.161	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
KLF4.p3	-1.185	KLF4
PATZ1.p2	-1.195	PATZ1
FOXQ1.p2	-1.200	FOXQ1
UUGGCAA	-1.222
CDX1,2,4.p2	-1.227	CDX1 CDX2 CDX4
PAX4.p2	-1.288	PAX4
PAX5.p2	-1.312	PAX5
AGUGCAA	-1.350
PBX1.p2	-1.386	PBX1
RXRG_dimer.p3	-1.443	NR1H2 RXRA PPARG PPARA RXRB RXRG
SOX5.p2	-1.474	SOX5
AUGGCAC	-1.482
SOX{8,9,10}.p2	-1.532	SOX9 SOX8 SOX10
HES1.p2	-1.546	HES1
UCAAGUA	-1.563
NFE2L2.p2	-1.570	NFE2L2
TFAP2B.p2	-1.589	TFAP2B
GCAGCAU	-1.594
GUCAGUU	-1.611
EWSR1-FLI1.p2	-1.615	FLI1 EWSR1
AGUGGUU	-1.648
ACAGUAC	-1.785
LMO2.p2	-1.819	LMO2
BPTF.p2	-1.931	BPTF
ZBTB16.p2	-1.972	ZBTB16
SP1.p2	-2.021	SP1
UCCAGUU	-2.058
CREB1.p2	-2.059	CREB1
FOXN1.p2	-2.215	FOXN1
ZNF148.p2	-2.223	ZNF148
UCACAUU	-2.335
XBP1.p3	-2.366	XBP1
ZFP161.p2	-2.660	ZFP161
EHF.p2	-2.666	EHF
IRF1,2,7.p3	-2.687	IRF1 IRF2 IRF7
TFDP1.p2	-2.752	TFDP1
bHLH_family.p2	-2.983	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NKX2-2,8.p2	-3.142	NKX2-2 NKX2-8
ATF4.p2	-3.410	ATF4
ESRRA.p2	-3.445	ESRRA
ATF5_CREB3.p2	-3.471	ATF5 CREB3
ELF1,2,4.p2	-3.657	ELF2 ELF1 ELF4
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.358	ARNT MAX MYC USF1 BHLHB2 ARNT2
BACH2.p2	-4.565	BACH2
MAFB.p2	-4.633	MAFB
GGAAUGU	-4.957
HIF1A.p2	-5.153	HIF1A
E2F1..5.p2	-5.449	E2F4 E2F5 E2F2 E2F1 E2F3
ELK1,4_GABP{A,B1}.p3	-7.644	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
ZNF143.p2	-7.783	ZNF143
MYB.p2	-7.917	MYB
NFY{A,B,C}.p2	-9.096	NFYC NFYB NFYA
YY1.p2	-10.505	YY1
NRF1.p2	-10.862	NRF1

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Sample name: GNF_2_UterusCorpus

Sorted z-values for every WM.