Sample name: Rep1_HSMM

Sorted Z-values histogram for the sample Rep1_HSMM

Sorted Z-values histogram for the sample Rep1_HSMM

Sorted z-values for every WM.

WM nameZ-valueAssociated genesLogo
SNAI1..3.p2 6.211 SNAI2 (SLUGH1)
SNAI1 (SNA, SLUGH2, SNAH)
SNAI3 (SMUC, Zfp293)
HMGA1,2.p2 4.223 HMGA1
HMGA2 (BABL, LIPO)
EOMES.p2 3.833 EOMES (TBR2)
EN1,2.p2 3.145 EN1
EN2
HLF.p2 3.099 HLF (MGC33822)
SRY.p2 2.918 SRY (TDF)
CRX.p2 2.884 CRX (CRD, LCA7, OTX3)
TGIF1.p2 2.823 TGIF1
ZEB1.p2 2.664 ZEB1 (BZP, ZEB, AREB6, NIL-2-A, Zfhep, Zfhx1a)
GATA6.p2 2.469 GATA6
SOX5.p2 2.462 SOX5 (L-SOX5, MGC35153)
PRRX1,2.p2 2.329 PRRX2 (PRX2, PMX2)
PRRX1 (PHOX1)
FOX{F1,F2,J1}.p2 2.315 FOXF2 (FREAC2)
FOXJ1 (HFH-4, HFH4)
FOXF1 (FREAC1)
CDC5L.p2 2.284 CDC5L (PCDC5RP, hCDC5, CEF1)
REST.p3 2.284 REST (NRSF, XBR)
HNF4A_NR2F1,2.p2 2.274 NR2F1 (EAR-3, COUP-TFI, TCFCOUP1, SVP44)
NR2F2 (COUP-TFII, COUPTFB, SVP40)
HNF4A (NR2A1, HNF4)
POU1F1.p2 2.273 POU1F1 (GHF-1)
ZBTB16.p2 2.255 ZBTB16 (PLZF)
PITX1..3.p2 2.110 PITX2 (IGDS, RS, Brx1, Otlx2, ARP1)
PITX3
PITX1 (PTX1, POTX)
MEF2{A,B,C,D}.p2 2.101 MEF2A (RSRFC4, RSRFC9)
MEF2C
MEF2D
MEF2BNB-MEF2B (MEF2B, LOC729991-MEF2B)
MEF2B (RSRFR2, FLJ32648)
IRF1,2,7.p3 2.072 IRF1 (MAR, IRF-1)
IRF2 (IRF-2, DKFZp686F0244)
IRF7 (IRF7A, IRF-7H)
NFATC1..3.p2 2.005 NFATC3 (NFAT4, NFATX)
NFATC2 (NF-ATP, NFATp, NFAT1)
NFATC1 (NF-ATC, NFATc, NFAT2)
FOXP3.p2 1.835 FOXP3 (JM2, XPID, AIID, PIDX, DIETER, SCURFIN)
CDX1,2,4.p2 1.763 CDX1
CDX2
CDX4
EHF.p2 1.755 EHF
FOSL2.p2 1.681 FOSL2 (FRA2, FLJ23306)
TBP.p2 1.572 TBP (TFIID)
NKX2-2,8.p2 1.570 NKX2-2 (NKX2.2)
NKX2-8 (NKX2.8, Nkx2-9)
HOX{A4,D4}.p2 1.557 HOXA4
HOXD4
SP1.p2 1.529 SP1
HSF1,2.p2 1.507 HSF1 (HSTF1)
HSF2
POU5F1.p2 1.498 POU5F1 (OCT3, Oct4, MGC22487)
NR3C1.p2 1.469 NR3C1 (GR)
HAND1,2.p2 1.461 HAND1 (eHand, Thing1, Hxt, bHLHa27)
HAND2 (dHand, Thing2, Hed, bHLHa26)
FOXQ1.p2 1.442 FOXQ1 (HFH1)
TP53.p2 1.440 TP53 (p53, LFS1)
NKX2-1,4.p2 1.425 NKX2-1 (TTF-1)
NKX2-4 (NKX2.4)
RUNX1..3.p2 1.423 RUNX1 (PEBP2A2, AMLCR1)
RUNX3 (AML2, PEBP2A3)
RUNX2 (AML3, PEBP2A1, PEBP2aA1)
NANOG.p2 1.344 NANOG (FLJ12581, FLJ40451)
PAX2.p2 1.291 PAX2
SPI1.p2 1.199 SPI1 (PU.1, SPI-A, OF, SFPI1, SPI-1)
CTCF.p2 1.162 CTCF
HOX{A6,A7,B6,B7}.p2 1.151 HOXB6
HOXA7
HOXB7
HOXA6
ETS1,2.p2 1.141 ETS2
ETS1 (FLJ10768, ETS-1)
TBX4,5.p2 1.128 TBX5
TBX4
NANOG{mouse}.p2 1.055 NANOG (FLJ12581, FLJ40451)
POU6F1.p2 0.991 POU6F1 (BRN5, MPOU, TCFB1)
POU2F1..3.p2 0.963 POU2F2 (OCT2)
POU2F1 (OCT1)
POU2F3 (OCT11, PLA-1, Skn-1a, Epoc-1)
ARID5B.p2 0.924 ARID5B (FLJ21150, MRF2)
HIF1A.p2 0.885 HIF1A (MOP1, HIF-1alpha, PASD8, HIF1)
TLX2.p2 0.859 TLX2 (Enx, Tlx2, NCX)
STAT1,3.p3 0.832 STAT1 (STAT91, ISGF-3)
STAT3 (APRF)
MSX1,2.p2 0.831 MSX1 (HYD1, OFC5)
MSX2 (CRS2, FPP, HOX8, MSH, PFM)
ZNF423.p2 0.829 ZNF423 (KIAA0760, OAZ, Roaz, Ebfaz, Zfp104)
HOXA9_MEIS1.p2 0.805 MEIS1
HOXA9
CEBPA,B_DDIT3.p2 0.786 DDIT3 (CHOP10, GADD153, CHOP)
CEBPA (C/EBP-alpha)
CEBPB (LAP, CRP2, NFIL6, IL6DBP)
IKZF2.p2 0.757 IKZF2 (Helios)
STAT2,4,6.p2 0.745 STAT2 (STAT113)
STAT4
STAT6 (D12S1644, IL-4-STAT)
EBF1.p2 0.727 EBF1 (OLF1)
TLX1..3_NFIC{dimer}.p2 0.718 TLX1
TLX3 (RNX)
EVI1.p2 0.670 EVI1 (MDS1-EVI1, PRDM3)
ONECUT1,2.p2 0.668 ONECUT2 (OC-2)
ONECUT1 (HNF-6)
NR6A1.p2 0.643 NR6A1 (GCNF1, RTR)
PDX1.p2 0.640 PDX1 (IDX-1, STF-1, PDX-1, MODY4)
CUX2.p2 0.628 CUX2 (KIAA0293, CDP2)
NFIL3.p2 0.623 NFIL3 (E4BP4, NFIL3A, NF-IL3A)
LMO2.p2 0.621 LMO2 (TTG2, RHOM2, RBTN2)
DMAP1_NCOR{1,2}_SMARC.p2 0.615 SMARCA1 (SNF2LB, NURF140, ISWI, SWI)
SMARCC2 (BAF170, Rsc8, CRACC2)
SMARCA5 (hSNF2H, hISWI, ISWI)
NCOR1 (N-CoR, hCIT529I10, TRAC1, hN-CoR, KIAA1047, MGC104216)
NCOR2 (SMRT, SMRTE, TRAC-1, CTG26, TNRC14)
DMAP1 (DNMAP1, FLJ11543, KIAA1425, DNMTAP1, EAF2, SWC4)
AIRE.p2 0.609 AIRE (PGA1, APS1)
STAT5{A,B}.p2 0.600 STAT5B
STAT5A (MGF)
NKX3-1.p2 0.575 NKX3-1 (NKX3.1, BAPX2)
TAL1_TCF{3,4,12}.p2 0.565 TCF3 (E2A, ITF1, MGC129647, MGC129648, bHLHb21)
TCF4 (SEF2-1B, ITF2, bHLHb19)
TAL1 (SCL, bHLHa17)
TCF12 (HEB, HTF4, HsT17266, bHLHb20)
ALX1.p2 0.560 ALX1
HOX{A5,B5}.p2 0.510 HOXB5
HOXA5
MYB.p2 0.499 MYB (c-myb)
GATA1..3.p2 0.491 GATA1 (ERYF1, NFE1)
GATA2 (NFE1B)
GATA3 (HDR)
SREBF1,2.p2 0.481 SREBF1 (SREBP1, bHLHd1)
SREBF2 (SREBP2, bHLHd2)
PPARG.p2 0.440 PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
KLF4.p3 0.428 KLF4 (EZF, GKLF)
NFE2.p2 0.422 NFE2 (NF-E2)
GFI1B.p2 0.379 GFI1B
FOXA2.p3 0.378 FOXA2
NR1H4.p2 0.351 NR1H4 (FXR, RIP14, HRR1, HRR-1)
NKX3-2.p2 0.314 NKX3-2 (NKX3B, NKX3.2)
FOX{D1,D2}.p2 0.314 FOXD2 (FREAC9)
FOXD1 (FREAC4)
IKZF1.p2 0.217 IKZF1 (hIk-1, LyF-1, Hs.54452, IKAROS)
HNF1A.p2 0.200 HNF1A (HNF1, LFB1)
DBP.p2 0.198 DBP (DABP)
SOX2.p2 0.182 SOX2
LEF1_TCF7_TCF7L1,2.p2 0.150 TCF7 (TCF-1)
TCF7L2 (TCF-4)
LEF1 (TCF1ALPHA)
TCF7L1
RXRG_dimer.p3 0.149 NR1H2 (NER, NER-I, RIP15, LXR-b)
RXRA (NR2B1)
PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
PPARA (hPPAR, NR1C1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
SOX{8,9,10}.p2 0.140 SOX9 (SRA1)
SOX8
SOX10 (DOM, WS4, WS2E)
ESRRA.p2 0.109 ESRRA (ERR1, ERRalpha, NR3B1, ERRa)
GLI1..3.p2 0.095 GLI1
GLI2 (THP2, HPE9, THP1)
GLI3 (PAP-A, PAPA, PAPA1, PAPB, ACLS, PPDIV)
FOXO1,3,4.p2 0.061 FOXO1 (FKH1)
FOXO4 (AFX1)
FOXO3 (AF6q21, FOXO2)
RBPJ.p2 0.057 RBPJ (SUH, IGKJRB, RBPJK, KBF2, RBP-J, CBF1)
MYBL2.p2 0.050 MYBL2 (BMYB, B-MYB)
FOX{I1,J2}.p2 0.043 FOXI1 (FREAC6)
FOXJ2 (FHX)
PAX8.p2 0.043 PAX8
AHR_ARNT_ARNT2.p2 0.033 ARNT (HIF-1beta, bHLHe2)
AHR
ARNT2 (KIAA0307, bHLHe1)
RORA.p2 0.020 RORA (RZRA, ROR1, ROR2, ROR3, NR1F1)
PAX3,7.p2 0.009 PAX7 (Hup1)
PAX3 (HUP2)
NKX6-1,2.p2 0.004 NKX6-1 (Nkx6.1)
NKX6-2 (NKX6B, GTX, NKX6.1)
MYOD1.p2 -0.055 MYOD1 (PUM, MYOD, bHLHc1)
T.p2 -0.058 T
EWSR1-FLI1.p2 -0.062 FLI1 (EWSR2, SIC-1)
EWSR1 (EWS, K984G1.4)
POU5F1_SOX2{dimer}.p2 -0.117 POU5F1 (OCT3, Oct4, MGC22487)
SOX2
VSX1,2.p2 -0.119 VSX2 (RET1)
VSX1 (PPD)
ZFP161.p2 -0.145 ZFP161 (ZNF478, ZBTB14)
ATF4.p2 -0.182 ATF4 (TAXREB67, CREB-2)
GZF1.p2 -0.190 GZF1 (dJ322G13.2, ZBTB23)
bHLH_family.p2 -0.206 ARNTL (MOP3, JAP3, BMAL1, PASD3, bHLHe5)
MITF (WS2A, MI, bHLHe32)
MXI1 (MXD2, MAD2, MXI, bHLHc11)
TFE3 (TFEA, bHLHe33)
CLOCK (KIAA0334, KAT13D, bHLHe8)
OLIG2 (RACK17, OLIGO2, bHLHe19)
MXD4 (MAD4, MSTP149, MST149, bHLHc12)
HEY2 (bHLHb32)
HEY1 (HESR-1, CHF2, HESR1, HRT-1, CHF-2, HERP2, BHLHb31)
HEYL (bHLHb33)
MLXIPL (WS-bHLH, MIO, CHREBP, MONDOB)
HES6 (bHLHc23)
MXD3 (MAD3, bHLHc13)
ARNTL2 (BMAL2, MOP9, CLIF, PASD9, bHLHe6)
ID1 (dJ857M17.1.2, bHLHb24)
MNT (ROX, MXD6, MAD6, bHLHd3)
OLIG1 (BHLHB6, bHLHe21)
NPAS2 (MOP4, PASD4, bHLHe9)
ZNF238.p2 -0.207 ZNF238 (C2H2-171, TAZ-1, RP58, ZBTB18)
CREB1.p2 -0.207 CREB1
NFE2L1.p2 -0.218 NFE2L1 (NRF1, LCR-F1, FLJ00380, TCF11)
PAX6.p2 -0.255 PAX6 (D11S812E, AN, WAGR)
NFIX.p2 -0.314 NFIX (NF1A)
HMX1.p2 -0.322 HMX1 (H6, NKX5-3)
AR.p2 -0.342 AR (AIS, NR3C4, SMAX1, HUMARA)
NKX2-3_NKX2-5.p2 -0.348 NKX2-5 (CSX1, NKX2.5, NKX4-1)
NKX2-3 (NKX2.3, CSX3, NKX4-3)
SPIB.p2 -0.378 SPIB (SPI-B)
ZNF384.p2 -0.386 ZNF384 (CAGH1A, CIZ, NMP4, NP)
JUN.p2 -0.398 JUN (c-Jun, AP-1)
JUND (AP-1)
JUNB
ZNF148.p2 -0.413 ZNF148 (BERF-1, ZBP-89, BFCOL1, HT-BETA, ZFP148, pHZ-52)
SMAD1..7,9.p2 -0.437 SMAD5 (Dwfc, JV5-1)
SMAD1 (MADR1, JV4-1)
SMAD3 (JV15-2, HsT17436)
SMAD4 (DPC4)
SMAD2 (MADR2, JV18-1)
SMAD6 (HsT17432)
SMAD7
SMAD9
SOX17.p2 -0.475 SOX17
FOXL1.p2 -0.475 FOXL1 (FREAC7, FKH6)
ADNP_IRX_SIX_ZHX.p2 -0.497 SIX5
ZHX1
IRX4
ADNP (KIAA0784, ADNP1)
ZHX3 (KIAA0395)
ZHX2 (KIAA0854)
IRX5 (IRX-2a)
SIX2
XBP1.p3 -0.504 XBP1
PATZ1.p2 -0.550 PATZ1 (MAZR, dJ400N23, ZBTB19, ZSG, RIAZ, PATZ)
RXRA_VDR{dimer}.p2 -0.579 VDR (NR1I1)
BACH2.p2 -0.582 BACH2
POU3F1..4.p2 -0.583 POU3F1 (OCT6, SCIP)
POU3F3 (BRN1, OTF8)
POU3F2 (POUF3, BRN2, OCT7)
POU3F4 (BRN4, OTF9)
FOXD3.p2 -0.595 FOXD3 (Genesis, HFH2)
ATF6.p2 -0.603 ATF6 (ATF6A)
NR5A1,2.p2 -0.619 NR5A1 (FTZ1, SF-1, ELP, AD4BP)
NR5A2 (FTZ-F1beta, hB1F, LRH-1, FTZ-F1, hB1F-2, B1F2)
GTF2A1,2.p2 -0.638 GTF2A1 (TFIIA)
GTF2A2 (TFIIA, HsT18745)
ATF5_CREB3.p2 -0.662 ATF5
CREB3 (LZIP, Luman)
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2 -0.696 ARNT (HIF-1beta, bHLHe2)
MAX (bHLHd4)
MYC (c-Myc, bHLHe39)
USF1 (UEF, MLTFI, bHLHb11)
BHLHB2 (DEC1, bHLHe40)
ARNT2 (KIAA0307, bHLHe1)
LHX3,4.p2 -0.765 LHX3
LHX4 (Gsh4)
PAX4.p2 -0.791 PAX4
PBX1.p2 -0.848 PBX1
PRDM1.p3 -0.852 PRDM1 (PRDI-BF1)
SPZ1.p2 -0.858 SPZ1 (NYD-TSP1, FLJ25709)
RFX1..5_RFXANK_RFXAP.p2 -0.897 RFX1 (EF-C)
RFXAP
RFX5
RFXANK (BLS, RFX-B, ANKRA1, F14150_1, MGC138628)
RFX4
RFX3
RFX2 (FLJ14226)
BPTF.p2 -0.914 BPTF (FAC1, NURF301)
GTF2I.p2 -0.930 GTF2I (TFII-I, BAP-135, SPIN, BTKAP1, DIWS, IB291)
MAZ.p2 -0.975 MAZ (ZF87, Pur-1, Zif87, ZNF801)
KLF12.p2 -1.015 KLF12 (AP-2rep, HSPC122, AP2REP)
FOX{C1,C2}.p2 -1.052 FOXC1 (FREAC3, ARA, IGDA, IHG1)
FOXC2 (MFH-1)
NFKB1_REL_RELA.p2 -1.082 RELA (p65)
REL (I-Rel)
NFKB1 (KBF1, p105)
FOS_FOS{B,L1}_JUN{B,D}.p2 -1.156 FOS (c-fos, AP-1)
JUNB
FOSL1 (fra-1)
JUND (AP-1)
FOSB (G0S3, GOSB, GOS3, AP-1, MGC42291, DKFZp686C0818)
FEV.p2 -1.167 FEV (PET-1, HSRNAFEV)
GFI1.p2 -1.170 GFI1
TFAP2B.p2 -1.199 TFAP2B (AP2-B)
NFE2L2.p2 -1.216 NFE2L2 (NRF2)
YY1.p2 -1.253 YY1 (NF-E1, DELTA, UCRBP, YIN-YANG-1, INO80S)
EGR1..3.p2 -1.257 EGR3 (PILOT)
EGR1 (TIS8, G0S30, NGFI-A, KROX-24, ZIF-268, AT225, ZNF225)
EGR2
ESR1.p2 -1.263 ESR1 (NR3A1, Era)
RXR{A,B,G}.p2 -1.280 RXRA (NR2B1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
E2F1..5.p2 -1.323 E2F4 (E2F-4)
E2F5
E2F2 (E2F-2)
E2F1 (RBP3)
E2F3
TFEB.p2 -1.329 TFEB
TCF4_dimer.p2 -1.473 TCF4 (E2-2, ITF2, PTHS, SEF2, SEF2-1, SEF2-1A, SEF2-1B, bHLHb19, MGC149723, MGC149724)
TFDP1.p2 -1.494 TFDP1 (Dp-1, DRTF1, DP1)
ATF2.p2 -1.540 ATF2 (TREB7, CRE-BP1, HB16)
TEAD1.p2 -1.583 TEAD1 (TEF-1)
TEAD2 (ETF, TEF4, TEF-4, TEAD-2)
TEAD3 (TEF5, TEAD5, TEF-5, DTEF-1, ETFR-1, TEAD-3)
TEAD4 (TEF3, RTEF1, TEF-3, EFTR-2, TEFR-1, TCF13L1, hRTEF-1B)
MAFB.p2 -1.594 MAFB
NHLH1,2.p2 -1.686 NHLH1 (NSCL, NSCL1, bHLHa35)
NHLH2 (NSCL2, bHLHa34)
PAX5.p2 -1.734 PAX5 (BSAP)
NRF1.p2 -1.746 NRF1 (EWG, ALPHA-PAL)
HES1.p2 -1.779 HES1 (FLJ20408, HES-1, Hes1, bHLHb39)
HIC1.p2 -1.783 HIC1 (ZBTB29)
ELF1,2,4.p2 -1.834 ELF2 (EU32, NERF, NERF-2, NERF-1A, NERF-1B)
ELF1
ELF4 (MEF, ELFR)
TFCP2.p2 -1.846 TFCP2 (CP2, LSF, LBP-1C, TFCP2C)
ZBTB6.p2 -1.878 ZBTB6 (ZID)
EP300.p2 -1.887 EP300 (p300, KAT3B)
FOXN1.p2 -1.922 FOXN1 (FKHL20)
TFAP4.p2 -2.188 TFAP4 (AP-4)
NFY{A,B,C}.p2 -2.417 NFYC (CBF-C)
NFYB (CBF-A, HAP3)
NFYA (HAP2, CBF-B)
MTF1.p2 -2.562 MTF1
ELK1,4_GABP{A,B1}.p3 -2.603 GABPA (E4TF1A, NFT2, NRF2, E4TF1-60, NRF2A)
GABPB1 (E4TF1-47, GABPB)
ELK4 (SAP1)
ELK1
MYFfamily.p2 -2.688 MYOD1 (PUM, MYOD, bHLHc1)
MYF6 (MRF4, bHLHc4)
MYF5 (bHLHc2)
MYOG (bHLHc3)
ZNF143.p2 -2.931 ZNF143 (SBF, pHZ-1, STAF)
HBP1_HMGB_SSRP1_UBTF.p2 -3.051 HMGB2
HMGB3 (HMG2A, MGC90319)
SSRP1 (FACT80)
UBTF (UBF, NOR-90)
HBP1
SRF.p3 -3.338 SRF (MCM1)
MZF1.p2 -3.835 MZF1 (MZF1B, ZSCAN6, MZF-1, Zfp98)
RREB1.p2 -3.956 RREB1 (HNT)
ZIC1..3.p2 -3.982 ZIC1 (ZIC, ZNF201)
ZIC2 (HPE5)
ZIC3 (HTX, ZNF203)
TFAP2{A,C}.p2 -5.145 TFAP2C (AP2-GAMMA, ERF1, TFAP2G, hAP-2g)
TFAP2A (AP-2)