Sample name: Rep2_HSMM

Sorted Z-values histogram for the sample Rep2_HSMM

Sorted Z-values histogram for the sample Rep2_HSMM

Sorted z-values for every WM.

WM nameZ-valueAssociated genesLogo
SNAI1..3.p2 6.143 SNAI2 (SLUGH1)
SNAI1 (SNA, SLUGH2, SNAH)
SNAI3 (SMUC, Zfp293)
ZNF143.p2 5.706 ZNF143 (SBF, pHZ-1, STAF)
HIC1.p2 5.522 HIC1 (ZBTB29)
AHR_ARNT_ARNT2.p2 5.469 ARNT (HIF-1beta, bHLHe2)
AHR
ARNT2 (KIAA0307, bHLHe1)
SP1.p2 5.235 SP1
EHF.p2 4.837 EHF
TBP.p2 4.649 TBP (TFIID)
ZEB1.p2 4.549 ZEB1 (BZP, ZEB, AREB6, NIL-2-A, Zfhep, Zfhx1a)
YY1.p2 3.825 YY1 (NF-E1, DELTA, UCRBP, YIN-YANG-1, INO80S)
NRF1.p2 3.823 NRF1 (EWG, ALPHA-PAL)
NHLH1,2.p2 3.736 NHLH1 (NSCL, NSCL1, bHLHa35)
NHLH2 (NSCL2, bHLHa34)
PAX5.p2 3.594 PAX5 (BSAP)
HMX1.p2 3.436 HMX1 (H6, NKX5-3)
PAX2.p2 3.148 PAX2
ELK1,4_GABP{A,B1}.p3 3.132 GABPA (E4TF1A, NFT2, NRF2, E4TF1-60, NRF2A)
GABPB1 (E4TF1-47, GABPB)
ELK4 (SAP1)
ELK1
TFDP1.p2 3.038 TFDP1 (Dp-1, DRTF1, DP1)
EBF1.p2 2.915 EBF1 (OLF1)
SPI1.p2 2.679 SPI1 (PU.1, SPI-A, OF, SFPI1, SPI-1)
bHLH_family.p2 2.626 ARNTL (MOP3, JAP3, BMAL1, PASD3, bHLHe5)
MITF (WS2A, MI, bHLHe32)
MXI1 (MXD2, MAD2, MXI, bHLHc11)
TFE3 (TFEA, bHLHe33)
CLOCK (KIAA0334, KAT13D, bHLHe8)
OLIG2 (RACK17, OLIGO2, bHLHe19)
MXD4 (MAD4, MSTP149, MST149, bHLHc12)
HEY2 (bHLHb32)
HEY1 (HESR-1, CHF2, HESR1, HRT-1, CHF-2, HERP2, BHLHb31)
HEYL (bHLHb33)
MLXIPL (WS-bHLH, MIO, CHREBP, MONDOB)
HES6 (bHLHc23)
MXD3 (MAD3, bHLHc13)
ARNTL2 (BMAL2, MOP9, CLIF, PASD9, bHLHe6)
ID1 (dJ857M17.1.2, bHLHb24)
MNT (ROX, MXD6, MAD6, bHLHd3)
OLIG1 (BHLHB6, bHLHe21)
NPAS2 (MOP4, PASD4, bHLHe9)
HIF1A.p2 2.620 HIF1A (MOP1, HIF-1alpha, PASD8, HIF1)
ATF4.p2 2.542 ATF4 (TAXREB67, CREB-2)
REST.p3 2.500 REST (NRSF, XBR)
MAFB.p2 2.489 MAFB
HOX{A6,A7,B6,B7}.p2 2.221 HOXB6
HOXA7
HOXB7
HOXA6
CREB1.p2 2.213 CREB1
ZBTB16.p2 2.192 ZBTB16 (PLZF)
FOXN1.p2 2.119 FOXN1 (FKHL20)
ESRRA.p2 2.091 ESRRA (ERR1, ERRalpha, NR3B1, ERRa)
MTF1.p2 2.042 MTF1
NFY{A,B,C}.p2 1.980 NFYC (CBF-C)
NFYB (CBF-A, HAP3)
NFYA (HAP2, CBF-B)
EP300.p2 1.914 EP300 (p300, KAT3B)
GTF2I.p2 1.905 GTF2I (TFII-I, BAP-135, SPIN, BTKAP1, DIWS, IB291)
ATF5_CREB3.p2 1.768 ATF5
CREB3 (LZIP, Luman)
TBX4,5.p2 1.723 TBX5
TBX4
STAT5{A,B}.p2 1.720 STAT5B
STAT5A (MGF)
SPZ1.p2 1.697 SPZ1 (NYD-TSP1, FLJ25709)
ESR1.p2 1.689 ESR1 (NR3A1, Era)
NFIL3.p2 1.676 NFIL3 (E4BP4, NFIL3A, NF-IL3A)
HES1.p2 1.397 HES1 (FLJ20408, HES-1, Hes1, bHLHb39)
NKX3-1.p2 1.321 NKX3-1 (NKX3.1, BAPX2)
CTCF.p2 1.310 CTCF
XBP1.p3 1.267 XBP1
FOXD3.p2 1.264 FOXD3 (Genesis, HFH2)
SOX{8,9,10}.p2 1.184 SOX9 (SRA1)
SOX8
SOX10 (DOM, WS4, WS2E)
ZBTB6.p2 1.117 ZBTB6 (ZID)
SOX17.p2 1.095 SOX17
HBP1_HMGB_SSRP1_UBTF.p2 1.092 HMGB2
HMGB3 (HMG2A, MGC90319)
SSRP1 (FACT80)
UBTF (UBF, NOR-90)
HBP1
TFAP2B.p2 1.055 TFAP2B (AP2-B)
NFIX.p2 1.036 NFIX (NF1A)
POU6F1.p2 0.992 POU6F1 (BRN5, MPOU, TCFB1)
CDC5L.p2 0.988 CDC5L (PCDC5RP, hCDC5, CEF1)
HLF.p2 0.853 HLF (MGC33822)
ZNF423.p2 0.792 ZNF423 (KIAA0760, OAZ, Roaz, Ebfaz, Zfp104)
FOXQ1.p2 0.765 FOXQ1 (HFH1)
POU1F1.p2 0.743 POU1F1 (GHF-1)
PRDM1.p3 0.687 PRDM1 (PRDI-BF1)
GFI1.p2 0.683 GFI1
FOXO1,3,4.p2 0.669 FOXO1 (FKH1)
FOXO4 (AFX1)
FOXO3 (AF6q21, FOXO2)
STAT1,3.p3 0.605 STAT1 (STAT91, ISGF-3)
STAT3 (APRF)
EWSR1-FLI1.p2 0.603 FLI1 (EWSR2, SIC-1)
EWSR1 (EWS, K984G1.4)
FOX{D1,D2}.p2 0.570 FOXD2 (FREAC9)
FOXD1 (FREAC4)
E2F1..5.p2 0.563 E2F4 (E2F-4)
E2F5
E2F2 (E2F-2)
E2F1 (RBP3)
E2F3
TFCP2.p2 0.559 TFCP2 (CP2, LSF, LBP-1C, TFCP2C)
NFKB1_REL_RELA.p2 0.491 RELA (p65)
REL (I-Rel)
NFKB1 (KBF1, p105)
ALX1.p2 0.484 ALX1
EN1,2.p2 0.469 EN1
EN2
IKZF1.p2 0.469 IKZF1 (hIk-1, LyF-1, Hs.54452, IKAROS)
TFAP2{A,C}.p2 0.425 TFAP2C (AP2-GAMMA, ERF1, TFAP2G, hAP-2g)
TFAP2A (AP-2)
ATF6.p2 0.325 ATF6 (ATF6A)
PDX1.p2 0.324 PDX1 (IDX-1, STF-1, PDX-1, MODY4)
RXRG_dimer.p3 0.318 NR1H2 (NER, NER-I, RIP15, LXR-b)
RXRA (NR2B1)
PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
PPARA (hPPAR, NR1C1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
NR6A1.p2 0.300 NR6A1 (GCNF1, RTR)
LEF1_TCF7_TCF7L1,2.p2 0.264 TCF7 (TCF-1)
TCF7L2 (TCF-4)
LEF1 (TCF1ALPHA)
TCF7L1
FOX{F1,F2,J1}.p2 0.238 FOXF2 (FREAC2)
FOXJ1 (HFH-4, HFH4)
FOXF1 (FREAC1)
GFI1B.p2 0.181 GFI1B
HNF1A.p2 0.160 HNF1A (HNF1, LFB1)
LMO2.p2 0.143 LMO2 (TTG2, RHOM2, RBTN2)
ZFP161.p2 0.124 ZFP161 (ZNF478, ZBTB14)
NKX3-2.p2 0.121 NKX3-2 (NKX3B, NKX3.2)
PRRX1,2.p2 0.120 PRRX2 (PRX2, PMX2)
PRRX1 (PHOX1)
NR1H4.p2 0.102 NR1H4 (FXR, RIP14, HRR1, HRR-1)
GZF1.p2 0.076 GZF1 (dJ322G13.2, ZBTB23)
T.p2 0.067 T
MYOD1.p2 0.059 MYOD1 (PUM, MYOD, bHLHc1)
SREBF1,2.p2 0.010 SREBF1 (SREBP1, bHLHd1)
SREBF2 (SREBP2, bHLHd2)
NKX6-1,2.p2 -0.007 NKX6-1 (Nkx6.1)
NKX6-2 (NKX6B, GTX, NKX6.1)
PAX8.p2 -0.014 PAX8
ONECUT1,2.p2 -0.021 ONECUT2 (OC-2)
ONECUT1 (HNF-6)
ZIC1..3.p2 -0.039 ZIC1 (ZIC, ZNF201)
ZIC2 (HPE5)
ZIC3 (HTX, ZNF203)
PAX3,7.p2 -0.041 PAX7 (Hup1)
PAX3 (HUP2)
ADNP_IRX_SIX_ZHX.p2 -0.048 SIX5
ZHX1
IRX4
ADNP (KIAA0784, ADNP1)
ZHX3 (KIAA0395)
ZHX2 (KIAA0854)
IRX5 (IRX-2a)
SIX2
PAX4.p2 -0.097 PAX4
MSX1,2.p2 -0.169 MSX1 (HYD1, OFC5)
MSX2 (CRS2, FPP, HOX8, MSH, PFM)
VSX1,2.p2 -0.248 VSX2 (RET1)
VSX1 (PPD)
PPARG.p2 -0.252 PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
RXR{A,B,G}.p2 -0.284 RXRA (NR2B1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
POU5F1.p2 -0.292 POU5F1 (OCT3, Oct4, MGC22487)
TLX2.p2 -0.298 TLX2 (Enx, Tlx2, NCX)
HOXA9_MEIS1.p2 -0.300 MEIS1
HOXA9
ZNF148.p2 -0.312 ZNF148 (BERF-1, ZBP-89, BFCOL1, HT-BETA, ZFP148, pHZ-52)
FOX{C1,C2}.p2 -0.323 FOXC1 (FREAC3, ARA, IGDA, IHG1)
FOXC2 (MFH-1)
TGIF1.p2 -0.350 TGIF1
CUX2.p2 -0.378 CUX2 (KIAA0293, CDP2)
BACH2.p2 -0.384 BACH2
RBPJ.p2 -0.384 RBPJ (SUH, IGKJRB, RBPJK, KBF2, RBP-J, CBF1)
SOX5.p2 -0.438 SOX5 (L-SOX5, MGC35153)
IRF1,2,7.p3 -0.442 IRF1 (MAR, IRF-1)
IRF2 (IRF-2, DKFZp686F0244)
IRF7 (IRF7A, IRF-7H)
FOX{I1,J2}.p2 -0.461 FOXI1 (FREAC6)
FOXJ2 (FHX)
CDX1,2,4.p2 -0.476 CDX1
CDX2
CDX4
FOXP3.p2 -0.503 FOXP3 (JM2, XPID, AIID, PIDX, DIETER, SCURFIN)
TAL1_TCF{3,4,12}.p2 -0.511 TCF3 (E2A, ITF1, MGC129647, MGC129648, bHLHb21)
TCF4 (SEF2-1B, ITF2, bHLHb19)
TAL1 (SCL, bHLHa17)
TCF12 (HEB, HTF4, HsT17266, bHLHb20)
CEBPA,B_DDIT3.p2 -0.520 DDIT3 (CHOP10, GADD153, CHOP)
CEBPA (C/EBP-alpha)
CEBPB (LAP, CRP2, NFIL6, IL6DBP)
KLF4.p3 -0.530 KLF4 (EZF, GKLF)
MYB.p2 -0.557 MYB (c-myb)
TP53.p2 -0.566 TP53 (p53, LFS1)
PAX6.p2 -0.588 PAX6 (D11S812E, AN, WAGR)
NKX2-1,4.p2 -0.616 NKX2-1 (TTF-1)
NKX2-4 (NKX2.4)
HMGA1,2.p2 -0.617 HMGA1
HMGA2 (BABL, LIPO)
ELF1,2,4.p2 -0.631 ELF2 (EU32, NERF, NERF-2, NERF-1A, NERF-1B)
ELF1
ELF4 (MEF, ELFR)
RFX1..5_RFXANK_RFXAP.p2 -0.655 RFX1 (EF-C)
RFXAP
RFX5
RFXANK (BLS, RFX-B, ANKRA1, F14150_1, MGC138628)
RFX4
RFX3
RFX2 (FLJ14226)
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2 -0.659 ARNT (HIF-1beta, bHLHe2)
MAX (bHLHd4)
MYC (c-Myc, bHLHe39)
USF1 (UEF, MLTFI, bHLHb11)
BHLHB2 (DEC1, bHLHe40)
ARNT2 (KIAA0307, bHLHe1)
PBX1.p2 -0.716 PBX1
RXRA_VDR{dimer}.p2 -0.778 VDR (NR1I1)
DMAP1_NCOR{1,2}_SMARC.p2 -0.835 SMARCA1 (SNF2LB, NURF140, ISWI, SWI)
SMARCC2 (BAF170, Rsc8, CRACC2)
SMARCA5 (hSNF2H, hISWI, ISWI)
NCOR1 (N-CoR, hCIT529I10, TRAC1, hN-CoR, KIAA1047, MGC104216)
NCOR2 (SMRT, SMRTE, TRAC-1, CTG26, TNRC14)
DMAP1 (DNMAP1, FLJ11543, KIAA1425, DNMTAP1, EAF2, SWC4)
RORA.p2 -0.885 RORA (RZRA, ROR1, ROR2, ROR3, NR1F1)
SPIB.p2 -0.932 SPIB (SPI-B)
AIRE.p2 -0.934 AIRE (PGA1, APS1)
AR.p2 -0.953 AR (AIS, NR3C4, SMAX1, HUMARA)
TFAP4.p2 -0.955 TFAP4 (AP-4)
FOSL2.p2 -0.981 FOSL2 (FRA2, FLJ23306)
NANOG.p2 -1.022 NANOG (FLJ12581, FLJ40451)
PATZ1.p2 -1.029 PATZ1 (MAZR, dJ400N23, ZBTB19, ZSG, RIAZ, PATZ)
TFEB.p2 -1.032 TFEB
BPTF.p2 -1.045 BPTF (FAC1, NURF301)
GTF2A1,2.p2 -1.062 GTF2A1 (TFIIA)
GTF2A2 (TFIIA, HsT18745)
NANOG{mouse}.p2 -1.063 NANOG (FLJ12581, FLJ40451)
NFE2.p2 -1.085 NFE2 (NF-E2)
GATA6.p2 -1.125 GATA6
FEV.p2 -1.146 FEV (PET-1, HSRNAFEV)
POU3F1..4.p2 -1.181 POU3F1 (OCT6, SCIP)
POU3F3 (BRN1, OTF8)
POU3F2 (POUF3, BRN2, OCT7)
POU3F4 (BRN4, OTF9)
NKX2-3_NKX2-5.p2 -1.207 NKX2-5 (CSX1, NKX2.5, NKX4-1)
NKX2-3 (NKX2.3, CSX3, NKX4-3)
ZNF238.p2 -1.242 ZNF238 (C2H2-171, TAZ-1, RP58, ZBTB18)
NKX2-2,8.p2 -1.284 NKX2-2 (NKX2.2)
NKX2-8 (NKX2.8, Nkx2-9)
GLI1..3.p2 -1.292 GLI1
GLI2 (THP2, HPE9, THP1)
GLI3 (PAP-A, PAPA, PAPA1, PAPB, ACLS, PPDIV)
EOMES.p2 -1.315 EOMES (TBR2)
POU5F1_SOX2{dimer}.p2 -1.320 POU5F1 (OCT3, Oct4, MGC22487)
SOX2
LHX3,4.p2 -1.347 LHX3
LHX4 (Gsh4)
EGR1..3.p2 -1.420 EGR3 (PILOT)
EGR1 (TIS8, G0S30, NGFI-A, KROX-24, ZIF-268, AT225, ZNF225)
EGR2
GATA1..3.p2 -1.436 GATA1 (ERYF1, NFE1)
GATA2 (NFE1B)
GATA3 (HDR)
MYFfamily.p2 -1.454 MYOD1 (PUM, MYOD, bHLHc1)
MYF6 (MRF4, bHLHc4)
MYF5 (bHLHc2)
MYOG (bHLHc3)
HOX{A4,D4}.p2 -1.465 HOXA4
HOXD4
NFE2L2.p2 -1.528 NFE2L2 (NRF2)
SRY.p2 -1.553 SRY (TDF)
ARID5B.p2 -1.568 ARID5B (FLJ21150, MRF2)
IKZF2.p2 -1.607 IKZF2 (Helios)
SMAD1..7,9.p2 -1.652 SMAD5 (Dwfc, JV5-1)
SMAD1 (MADR1, JV4-1)
SMAD3 (JV15-2, HsT17436)
SMAD4 (DPC4)
SMAD2 (MADR2, JV18-1)
SMAD6 (HsT17432)
SMAD7
SMAD9
MYBL2.p2 -1.702 MYBL2 (BMYB, B-MYB)
JUN.p2 -1.835 JUN (c-Jun, AP-1)
JUND (AP-1)
JUNB
HNF4A_NR2F1,2.p2 -1.840 NR2F1 (EAR-3, COUP-TFI, TCFCOUP1, SVP44)
NR2F2 (COUP-TFII, COUPTFB, SVP40)
HNF4A (NR2A1, HNF4)
HOX{A5,B5}.p2 -1.863 HOXB5
HOXA5
NFATC1..3.p2 -1.863 NFATC3 (NFAT4, NFATX)
NFATC2 (NF-ATP, NFATp, NFAT1)
NFATC1 (NF-ATC, NFATc, NFAT2)
MAZ.p2 -1.879 MAZ (ZF87, Pur-1, Zif87, ZNF801)
SOX2.p2 -1.934 SOX2
MEF2{A,B,C,D}.p2 -1.978 MEF2A (RSRFC4, RSRFC9)
MEF2C
MEF2D
MEF2BNB-MEF2B (MEF2B, LOC729991-MEF2B)
MEF2B (RSRFR2, FLJ32648)
TLX1..3_NFIC{dimer}.p2 -1.993 TLX1
TLX3 (RNX)
POU2F1..3.p2 -2.133 POU2F2 (OCT2)
POU2F1 (OCT1)
POU2F3 (OCT11, PLA-1, Skn-1a, Epoc-1)
NR3C1.p2 -2.157 NR3C1 (GR)
FOXA2.p3 -2.187 FOXA2
MZF1.p2 -2.212 MZF1 (MZF1B, ZSCAN6, MZF-1, Zfp98)
FOS_FOS{B,L1}_JUN{B,D}.p2 -2.245 FOS (c-fos, AP-1)
JUNB
FOSL1 (fra-1)
JUND (AP-1)
FOSB (G0S3, GOSB, GOS3, AP-1, MGC42291, DKFZp686C0818)
CRX.p2 -2.322 CRX (CRD, LCA7, OTX3)
HSF1,2.p2 -2.399 HSF1 (HSTF1)
HSF2
RUNX1..3.p2 -2.453 RUNX1 (PEBP2A2, AMLCR1)
RUNX3 (AML2, PEBP2A3)
RUNX2 (AML3, PEBP2A1, PEBP2aA1)
STAT2,4,6.p2 -2.487 STAT2 (STAT113)
STAT4
STAT6 (D12S1644, IL-4-STAT)
SRF.p3 -2.530 SRF (MCM1)
EVI1.p2 -2.575 EVI1 (MDS1-EVI1, PRDM3)
TEAD1.p2 -2.726 TEAD1 (TEF-1)
TEAD2 (ETF, TEF4, TEF-4, TEAD-2)
TEAD3 (TEF5, TEAD5, TEF-5, DTEF-1, ETFR-1, TEAD-3)
TEAD4 (TEF3, RTEF1, TEF-3, EFTR-2, TEFR-1, TCF13L1, hRTEF-1B)
FOXL1.p2 -2.888 FOXL1 (FREAC7, FKH6)
ATF2.p2 -2.930 ATF2 (TREB7, CRE-BP1, HB16)
PITX1..3.p2 -3.021 PITX2 (IGDS, RS, Brx1, Otlx2, ARP1)
PITX3
PITX1 (PTX1, POTX)
KLF12.p2 -3.142 KLF12 (AP-2rep, HSPC122, AP2REP)
ETS1,2.p2 -3.198 ETS2
ETS1 (FLJ10768, ETS-1)
DBP.p2 -3.216 DBP (DABP)
NR5A1,2.p2 -3.298 NR5A1 (FTZ1, SF-1, ELP, AD4BP)
NR5A2 (FTZ-F1beta, hB1F, LRH-1, FTZ-F1, hB1F-2, B1F2)
RREB1.p2 -3.569 RREB1 (HNT)
NFE2L1.p2 -3.571 NFE2L1 (NRF1, LCR-F1, FLJ00380, TCF11)
HAND1,2.p2 -3.621 HAND1 (eHand, Thing1, Hxt, bHLHa27)
HAND2 (dHand, Thing2, Hed, bHLHa26)
TCF4_dimer.p2 -4.515 TCF4 (E2-2, ITF2, PTHS, SEF2, SEF2-1, SEF2-1A, SEF2-1B, bHLHb19, MGC149723, MGC149724)
ZNF384.p2 -4.851 ZNF384 (CAGH1A, CIZ, NMP4, NP)