ISMARA results: E175_BP_KO

Sample name: E175_BP_KO_4

Sorted Z-values histogram for the sample E175_BP_KO_4

Sorted z-values for every WM.

WM name	Z-value	Associated genes
Nfatc1	7.519	Nfatc1
Hdx	6.974	Hdx
E2f2_E2f5	5.528	E2f2 E2f5
Irf2_Irf1_Irf8_Irf9_Irf7	5.358	Irf2 Irf1 Irf8 Irf9 Irf7
Sp100	3.560	Sp100
E2f1	3.508	E2f1
E2f4	3.298	E2f4
Foxj3_Tbl1xr1	3.060	Foxj3 Tbl1xr1
Tcf7_Tcf7l2	2.694	Tcf7 Tcf7l2
Pax5	2.500	Pax5
Tfap2d	2.191	Tfap2d
Tcf21_Msc	2.189	Tcf21 Msc
E2f8	2.100	E2f8
Foxa2_Foxa1	2.006	Foxa2 Foxa1
Ezh2_Atf2_Ikzf1	1.980	Ezh2 Atf2 Ikzf1
Foxd1	1.919	Foxd1
Nkx2-2	1.905	Nkx2-2
Sin3a	1.826	Sin3a
Scrt1	1.822	Scrt1
Tgif2_Tgif2lx1_Tgif2lx2	1.801	Tgif2 Tgif2lx1 Tgif2lx2
Stat2	1.756	Stat2
Tfap2a	1.719	Tfap2a
Rarg	1.683	Rarg
Hoxa6	1.675	Hoxa6
Lef1	1.669	Lef1
Hoxa13	1.643	Hoxa13
Ebf1	1.633	Ebf1 Ebf1
Lhx4	1.616	Lhx4
Spi1	1.576	Spi1
Pparg_Rxrg	1.549	Pparg Rxrg
Hivep1	1.492	Hivep1
Myb	1.489	Myb
Pitx1	1.485	Pitx1
Tfap2e	1.474	Tfap2e
E2f7	1.433	E2f7
Pax2	1.411	Pax2
Zic3	1.401	Zic3
Vdr	1.392	Vdr
Mybl2	1.368	Mybl2
Irx6_Irx2_Irx3	1.365	Irx6 Irx2 Irx3
Figla	1.348	Figla
Zbtb16	1.345	Zbtb16
Foxo4	1.305	Foxo4
Pitx3	1.291	Pitx3
Elf3	1.289	Elf3
Hes5_Hes7	1.260	Hes5 Hes7
Tfap2b	1.218	Tfap2b
Nr1h2	1.206	Nr1h2
Stat4_Stat3_Stat5b	1.193	Stat4 Stat3 Stat5b
Rxra	1.183	Rxra
Nfatc2	1.090	Nfatc2
Tbx19	1.087	Tbx19
Nanog	1.077	Nanog
Irf4	1.066	Irf4
Zfp219_Zfp740	1.059	Zfp219 Zfp740
Nfix	1.041	Nfix
Tbr1	1.041	Tbr1
Hoxd12	1.024	Hoxd12
E2f6	1.020	E2f6
Neurod1	1.014	Neurod1
Rbpj	1.012	Rbpj
Pou3f2	1.011	Pou3f2
Hinfp	1.005	Hinfp
Nkx3-1	1.005	Nkx3-1
Rela_Rel_Nfkb1	0.991	Rela Rel Nfkb1
Twist1	0.986	Twist1
Vsx1_Uncx_Prrx2_Shox2_Noto	0.981	Vsx1 Uncx Prrx2 Shox2 Noto
Prdm1	0.973	Prdm1
Pknox2_Pknox1	0.965	Pknox2 Pknox1
Gsx1_Alx1_Mixl1_Lbx2	0.951	Gsx1 Alx1 Mixl1 Lbx2
Erg	0.941	Erg
Hnf1b	0.939	Hnf1b
Ybx1_Nfya_Nfyb_Nfyc_Cebpz	0.934	Ybx1 Nfya Nfyb Nfyc Cebpz
Gata5	0.923	Gata5
Hsf2	0.915	Hsf2
Gsc2_Dmbx1	0.909	Gsc2 Dmbx1
Klf16_Sp8	0.906	Klf16 Sp8
Foxk1_Foxj1	0.905	Foxk1 Foxj1
Sox5_Sry	0.897	Sox5 Sry
Nhlh1	0.896	Nhlh1
Foxq1	0.852	Foxq1
Hoxa2	0.847	Hoxa2
Zfp110	0.839	Zfp110
Meox2	0.816	Meox2
Foxi1_Foxo1	0.800	Foxi1 Foxo1
Rxrb	0.796	Rxrb
Neurod2_Bhlha15_Bhlhe22_Olig1	0.793	Neurod2 Bhlha15 Bhlhe22 Olig1
Dlx1	0.784	Dlx1
Tbx4	0.782	Tbx4
Gbx2	0.781	Gbx2
Gli3_Zic1	0.773	Gli3 Zic1
Hmbox1	0.763	Hmbox1
Klf15	0.758	Klf15
E2f3	0.755	E2f3
Cebpb	0.746	Cebpb
Cdx2	0.724	Cdx2
Bcl6b	0.717	Bcl6b
Sox17	0.711	Sox17
Hmga2	0.707	Hmga2
Pax1_Pax9	0.695	Pax1 Pax9
Gfi1_Gfi1b	0.694	Gfi1 Gfi1b
Hoxa7_Hoxc8	0.686	Hoxa7 Hoxc8
Egr4	0.681	Egr4
Zic2	0.670	Zic2
Scrt2	0.665	Scrt2
Zbtb18	0.661	Zbtb18
Nfia	0.652	Nfia
Mga	0.649	Mga
Hoxc13_Hoxd13	0.642
Nkx2-9	0.634	Nkx2-9
Cpeb1	0.632	Cpeb1
Ar	0.629	Ar
Mef2c	0.625	Mef2c
Pbx1_Pbx3	0.623	Pbx1 Pbx3
Hoxc10	0.623	Hoxc10
Emx1_Emx2	0.621	Emx1 Emx2
Tbx20	0.619	Tbx20
Pou3f4	0.602	Pou3f4
Hoxc9	0.597	Hoxc9
Id4	0.596	Id4
Foxa3	0.592	Foxa3
Foxc2	0.589	Foxc2
Pou3f3	0.562	Pou3f3
Nr1i2	0.562	Nr1i2
Tfap4	0.553	Tfap4
Six3_Six1_Six2	0.550	Six3 Six1 Six2
Etv3_Erf_Fev_Elk4_Elk1_Elk3	0.541	Etv3 Erf Fev Elk4 Elk1 Elk3
T	0.533	T
Zfp148	0.516	Zfp148
Zbtb7b	0.513	Zbtb7b
Hoxb1	0.510	Hoxb1
Mnt	0.500	Mnt
Zbtb33_Chd2	0.496	Zbtb33 Chd2
Arntl_Tfe3_Mlx_Mitf_Mlxipl_Tfec	0.491	Arntl Tfe3 Mlx Mitf Mlxipl Tfec
Cebpa_Cebpg	0.489	Cebpa Cebpg
Obox6_Obox5	0.488	Obox6 Obox5
Hoxb3	0.487	Hoxb3
Tbp	0.487	Tbp
Smad2	0.470	Smad2
Atf1_Creb5	0.458	Atf1 Creb5
Klf12_Klf14_Sp4	0.453	Klf12 Klf14 Sp4
Hmx2	0.451	Hmx2
Hoxd9	0.446	Hoxd9
Evx2	0.444	Evx2
Atf5	0.433	Atf5
Insm1	0.425	Insm1
Relb	0.425	Relb
Smad4	0.406	Smad4
Lhx8	0.397	Lhx8
Six4	0.394	Six4
Sox4	0.389	Sox4
Bsx	0.375	Bsx
Hoxa5	0.371	Hoxa5
Klf7	0.368	Klf7
Sox11	0.368	Sox11
Rreb1	0.360	Rreb1
Nr4a2	0.355	Nr4a2
Vsx2_Dlx3	0.347	Vsx2 Dlx3
Nr0b1	0.347	Nr0b1
Atoh1_Bhlhe23	0.345	Atoh1 Bhlhe23
Arnt	0.335	Arnt
Sox15	0.332	Sox15
Rhox11	0.327	Rhox11
Nr3c2	0.317	Nr3c2
Pgr_Nr3c1	0.314	Pgr Nr3c1
Aire	0.314	Aire
Zfp128	0.312	Zfp128
Hoxd10	0.311	Hoxd10
Foxo6	0.307	Foxo6
Tfdp1_Wt1_Egr2	0.301	Tfdp1 Wt1 Egr2
Mnx1_Lhx6_Lmx1a	0.299	Mnx1 Lhx6 Lmx1a
Nfil3_Tef	0.297	Nfil3 Tef
Thra	0.283	Thra
Pou2f3	0.283	Pou2f3
Dmc1	0.270	Dmc1
Nkx2-5	0.263	Nkx2-5
Myf6	0.261	Myf6
Atf7_E4f1	0.259	Atf7 Atf7 E4f1
Meox1	0.256	Meox1
Zfp410	0.255	Zfp410
Gtf2i_Gtf2f1	0.246	Gtf2i Gtf2f1
Pou4f3	0.242	Pou4f3
Fos	0.236	Fos
Hnf4a	0.230	Hnf4a
Nr2f2	0.230	Nr2f2
Hes1	0.219	Hes1
Hoxd8	0.213	Hoxd8
Nfkb2	0.205	Nfkb2
Bbx	0.201	Bbx
Etv4	0.199	Etv4
Dlx5_Dlx4	0.198	Dlx5 Dlx4
Grhl1	0.195	Grhl1
Thrb	0.195	Thrb
Hmx1	0.192	Hmx1
Clock	0.192	Clock
Tlx1	0.189	Tlx1
Fosb	0.183	Fosb
Irf5_Irf6	0.171	Irf5 Irf6
Meis1	0.160	Meis1
Prop1	0.156	Prop1
Zbtb4	0.155	Zbtb4
Nkx2-4	0.144	Nkx2-4
Hoxb4	0.140	Hoxb4
En2	0.136	En2
Runx1	0.130	Runx1
Cdc5l	0.127	Cdc5l
Foxl1	0.113	Foxl1 Foxl1
Maz_Zfp281	0.111	Maz Zfp281
Nfat5	0.104	Nfat5
Epas1_Bcl3	0.103	Epas1 Bcl3
Zbtb12	0.101	Zbtb12
Spic	0.100	Spic
Nkx6-3_Dbx2_Barx2	0.100	Nkx6-3 Dbx2 Barx2
Lhx5_Lmx1b_Lhx1	0.098	Lhx5 Lmx1b Lhx1
Sox6_Sox9	0.097	Sox6 Sox9
Zkscan1	0.096	Zkscan1
Hoxb2_Dlx2	0.095	Hoxb2 Dlx2
Gmeb1	0.093	Gmeb1
Tbx2	0.092	Tbx2
Msx2_Hoxd4	0.092	Msx2
Sox13	0.091	Sox13
Tbx5	0.088	Tbx5
Mybl1	0.087	Mybl1
Zfp105	0.084	Zfp105
Bptf	0.080	Bptf
Ddit3	0.077	Ddit3
Ets2	0.061	Ets2
Msx1_Lhx9_Barx1_Rax_Dlx6	0.059	Msx1 Lhx9 Barx1 Rax Dlx6
Zfhx3	0.057	Zfhx3
Ppard	0.050	Ppard
Tbx3	0.049	Tbx3
Mafb	0.048	Mafb
Hoxa4	0.044	Hoxa4
Batf	0.036	Batf
Klf8	0.035	Klf8
Six6	0.025	Six6
Creb3	0.021	Creb3
Nkx2-6	0.021	Nkx2-6
Zkscan3	0.014	Zkscan3
Obox1	0.010	Obox1
Nr2f1_Nr4a1	0.001	Nr2f1 Nr4a1
Gata2_Gata1	-0.003	Gata2 Gata1
Mecom	-0.007	Mecom
Hoxa3	-0.008	Hoxa3
Hoxd1	-0.008	Hoxd1
Glis1	-0.012	Glis1
Neurog2	-0.016	Neurog2
Prdm14	-0.016	Prdm14
Stat5a	-0.023	Stat5a
Hoxd11_Cdx1_Hoxc11	-0.023	Hoxd11 Cdx1 Hoxc11
Hnf4g	-0.026	Hnf4g
Sox30	-0.030	Sox30
Gata3	-0.034	Gata3
Arid5a	-0.036	Arid5a
Zbtb7c	-0.042	Zbtb7c
Hlf	-0.044	Hlf
Smad3	-0.044	Smad3
Hey2	-0.048	Hey2
Nr2c2	-0.050	Nr2c2
Gcm1	-0.052	Gcm1
Ovol1	-0.059	Ovol1
Hmx3	-0.060	Hmx3
Foxo3	-0.060	Foxo3
Zbtb6	-0.063	Zbtb6
Nfatc4	-0.071	Nfatc4
Zbtb14	-0.071	Zbtb14
Rest	-0.071	Rest
Prdm4	-0.074	Prdm4
Cbfb	-0.076	Cbfb
Pax8	-0.078	Pax8
Ascl2	-0.082	Ascl2
Batf3	-0.085	Batf3
Hnf1a	-0.085	Hnf1a
Bcl6	-0.087	Bcl6
Pou2f2_Pou3f1	-0.088	Pou2f2 Pou3f1
Zbtb49	-0.091	Zbtb49
Trp63	-0.094	Trp63
Cenpb	-0.094	Cenpb
Hlx	-0.105	Hlx
Ehf	-0.109	Ehf
Gmeb2	-0.110	Gmeb2
Esrrg	-0.112	Esrrg
Zic4	-0.113	Zic4
Rarb	-0.116	Rarb
Isl1	-0.119	Isl1
Tfap2c	-0.121	Tfap2c
Runx3	-0.129	Runx3
Pou1f1	-0.131	Pou1f1
Barhl2	-0.143	Barhl2
Nfe2l1_Mafg	-0.145	Nfe2l1 Mafg Mafg
Arnt2	-0.148	Arnt2
Gata6	-0.150	Gata6
Tbx15	-0.151	Tbx15
En1	-0.153	En1
Xbp1_Creb3l1	-0.154	Xbp1 Creb3l1
Hoxc4_Arx_Otp_Esx1_Phox2b	-0.154	Hoxc4 Arx Otp Esx1 Phox2b
Zbtb7a	-0.161	Zbtb7a
Nkx2-1	-0.166	Nkx2-1
Klf6_Patz1	-0.168	Klf6 Patz1
Barhl1	-0.170	Barhl1
Foxd2	-0.174	Foxd2
Hoxa9_Hoxb9	-0.181	Hoxa9 Hoxb9
Rfx5	-0.187	Rfx5
Hsfy2	-0.190	Hsfy2
Hoxb5	-0.196	Hoxb5
Klf3	-0.199	Klf3
Hoxa1	-0.201	Hoxa1
Nkx6-1_Evx1_Hesx1	-0.212	Nkx6-1 Evx1 Hesx1
Hoxc6	-0.227	Hoxc6
Foxb1	-0.229	Foxb1
Hic1	-0.234	Hic1
Gbx1_Nobox_Alx3	-0.235	Gbx1 Nobox Alx3
Arid5b	-0.240	Arid5b
Lhx2_Hoxc5	-0.246	Lhx2 Hoxc5
Lhx3	-0.253	Lhx3
Nr1h4	-0.256	Nr1h4
Foxp2_Foxp3	-0.257	Foxp2 Foxp3
Irf3	-0.259	Irf3
Gata4	-0.266	Gata4
Cebpe	-0.270	Cebpe
Irx4	-0.271	Irx4
Cebpd	-0.276	Cebpd
Pbx2	-0.279	Pbx2
Msx3	-0.283	Msx3
Jun	-0.292	Jun
Plag1	-0.295	Plag1
Foxf1	-0.297	Foxf1
Fubp1	-0.305	Fubp1
Arid3a	-0.305	Arid3a
Fli1	-0.312	Fli1
Onecut2_Onecut3	-0.313	Onecut2 Onecut3
Hsf4	-0.316	Hsf4
Taf1	-0.317	Taf1
Gsx2_Hoxd3_Vax1	-0.318	Gsx2 Hoxd3 Vax1
Nr2c1	-0.323	Nr2c1
Pax3	-0.336	Pax3
Mef2b	-0.341	Mef2b
Hoxb6	-0.343	Hoxb6
Snai1_Zeb1_Snai2	-0.344	Snai1 Zeb1 Snai2
Gzf1	-0.347	Gzf1
Atf4	-0.351	Atf4
Nr2e3	-0.352	Nr2e3
Nr4a3	-0.352	Nr4a3
Hbp1	-0.355	Hbp1
Olig2_Olig3	-0.363	Olig2 Olig3
Spdef	-0.366	Spdef
Nr6a1	-0.367	Nr6a1
Rorc_Nr1d1	-0.379	Rorc Nr1d1
Tfcp2l1	-0.387	Tfcp2l1
Foxc1	-0.387	Foxc1
Pou2f1	-0.394	Pou2f1
Stat6	-0.398	Stat6
Tcf7l1	-0.401	Tcf7l1
Obox3	-0.411	Obox3
Foxg1	-0.412	Foxg1
Esr2	-0.417	Esr2
Trp53	-0.423	Trp53
Homez	-0.424	Homez
Nr1i3	-0.428	Nr1i3
Foxm1	-0.433	Foxm1
Foxn1	-0.438	Foxn1
Crem_Jdp2	-0.445	Crem Jdp2
Myod1	-0.448	Myod1
Zfp784	-0.449	Zfp784
Stat1	-0.450	Stat1
Runx2_Bcl11a	-0.452	Runx2 Bcl11a
Rora	-0.455	Rora
Cxxc1	-0.458	Cxxc1
Tbx21	-0.463	Tbx21
Zbtb3	-0.467	Zbtb3
Egr3	-0.480	Egr3
Glis2	-0.483	Glis2
Mtf1	-0.483	Mtf1
Sox7	-0.486	Sox7
Hoxb7	-0.486	Hoxb7
Sp2	-0.498	Sp2
Mafa	-0.504	Mafa
Tead1	-0.506	Tead1
Dbp	-0.508	Dbp
Smad1	-0.531	Smad1
Nkx1-1_Nkx1-2	-0.553	Nkx1-1 Nkx1-2
Nr2e1	-0.555	Nr2e1
Tlx2	-0.570	Tlx2
Glis3	-0.575	Glis3 Glis3
Prox1	-0.579	Prox1
Mzf1	-0.580	Mzf1
Esr1	-0.585	Esr1
Zfp423	-0.601	Zfp423
Tbx1_Eomes	-0.608	Tbx1 Eomes
Hand1	-0.611	Hand1
Hoxa11_Hoxc12	-0.622	Hoxa11 Hoxc12
Nkx3-2	-0.626	Nkx3-2
Otx1	-0.635	Otx1
Nfic_Nfib	-0.636	Nfic Nfib
Smarcc1_Fosl1	-0.640	Smarcc1 Fosl1
Prrx1_Isx_Prrxl1	-0.642	Prrx1 Isx Prrxl1
Zfp524	-0.643	Zfp524
Pax4	-0.647	Pax4
Pou4f1_Pou6f1	-0.651	Pou4f1 Pou6f1
Tcf3	-0.661	Tcf3
Zfp263	-0.662	Zfp263
Rara	-0.670	Rara
Zfp282	-0.676	Zfp282
Creb3l2	-0.698	Creb3l2
Nkx6-2	-0.700	Nkx6-2
Ebf3	-0.702	Ebf3
Phox2a	-0.713	Phox2a
Tgif1_Meis3	-0.720	Tgif1 Meis3
Maff	-0.723	Maff
Sox8	-0.723	Sox8
Alx4	-0.730	Alx4
Meis2	-0.735	Meis2
Trp73	-0.741	Trp73
Irx5	-0.747	Irx5
Pou5f1	-0.747	Pou5f1
Ptf1a	-0.762	Ptf1a
Tfeb_Usf1_Srebf1_Usf2_Bhlhe41_Srebf2	-0.763	Tfeb Usf1 Srebf1 Usf2 Bhlhe41 Srebf2
Sox21	-0.791	Sox21
Ubp1	-0.800	Ubp1
Crx_Gsc	-0.806	Crx Gsc
Zfp652	-0.816	Zfp652
Atf3	-0.816	Atf3
Fosl2_Bach2	-0.818	Fosl2 Bach2
Foxd3	-0.819	Foxd3
Sox1	-0.823	Sox1
Tal1	-0.837	Tal1
Atf6	-0.853	Atf6
Mef2d_Mef2a	-0.857	Mef2d Mef2a
Tead3_Tead4	-0.861	Tead3 Tead4
Bhlhe40	-0.875	Bhlhe40
Sox18_Sox12	-0.881	Sox18 Sox12
Nkx2-3	-0.885	Nkx2-3
Nfe2l2	-0.887	Nfe2l2
Zfp691	-0.888	Zfp691
Pax7	-0.944	Pax7
Klf13	-0.949	Klf13
Osr2_Osr1	-0.977	Osr2 Osr1
Zscan4c	-0.978	Zscan4c
Ep300	-0.985	Ep300
Onecut1_Cux2	-0.999	Onecut1 Cux2 Cux2
Gli2	-1.006	Gli2
Gli1	-1.018	Gli1
Hsf1	-1.019	Hsf1
Srf	-1.034	Srf
Creb1	-1.041	Creb1
Hic2	-1.059	Hic2
Brca1	-1.127	Brca1
Hoxb8_Pdx1	-1.172	Hoxb8 Pdx1
Rad21_Smc3	-1.175	Rad21 Smc3
Foxf2	-1.175	Foxf2
Max_Mycn	-1.188	Max Mycn
Maf_Nrl	-1.220	Maf Nrl
Hey1_Myc_Mxi1	-1.223	Hey1 Myc Mxi1
Sox14	-1.223	Sox14
Elf5	-1.241	Elf5
Hoxb13	-1.245	Hoxb13
Rhox4e_Rhox6_Vax2	-1.260	Rhox4e Rhox6 Vax2
Foxp1_Foxj2	-1.288	Foxp1 Foxj2
Mbd2	-1.321	Mbd2
Plagl1	-1.333	Plagl1
Junb_Jund	-1.336	Junb Jund
Hif1a	-1.347	Hif1a
Ctcfl_Ctcf	-1.349	Ctcfl Ctcf
Myog_Tcf12	-1.351	Myog Tcf12
Nr2f6	-1.390	Nr2f6
Nr5a2	-1.396	Nr5a2
Cux1	-1.403	Cux1
Sox2	-1.408	Sox2
Klf1	-1.420	Klf1
Pou6f2_Pou4f2	-1.429	Pou6f2 Pou4f2
Klf4_Sp3	-1.469	Klf4 Sp3
Isl2	-1.472	Isl2
Tfcp2	-1.527	Tfcp2
Hoxa10	-1.531	Hoxa10
Ppara	-1.608	Ppara
Hmga1	-1.640	Hmga1
Pitx2_Otx2	-1.666	Pitx2 Otx2
Etv1_Etv5_Gabpa	-1.683	Etv1 Etv5 Gabpa
Pax6	-1.716	Pax6
Nfatc3	-1.895	Nfatc3
Nfe2_Bach1_Mafk	-1.926	Nfe2 Bach1 Mafk
Mecp2	-1.962	Mecp2
Rfx2_Rfx7	-2.001	Rfx2 Rfx7
Zfp384	-2.069	Zfp384
Spib	-2.175	Spib
Egr1	-2.197	Egr1
Ikzf2	-2.224	Ikzf2
Chd1_Pml	-2.351	Chd1 Pml
Sox3_Sox10	-2.380	Sox3 Sox10
Ets1	-2.383	Ets1
Elf1_Elf2_Etv2_Elf4	-2.401	Elf1 Elf2 Etv2 Elf4
Gcm2	-2.456	Gcm2
Esrrb_Esrra	-2.581	Esrrb Esrra
Etv6	-2.645	Etv6
Tcf4_Mesp1	-2.692	Tcf4 Mesp1
Zfx_Zfp711	-3.012	Zfx Zfp711
Ahr	-3.098	Ahr
Sp1	-3.383	Sp1
Hcfc1_Six5_Smarcc2_Zfp143	-3.482	Hcfc1 Six5 Smarcc2 Zfp143
Rfx3_Rfx1_Rfx4	-4.766	Rfx3 Rfx1 Rfx4
Yy1_Yy2	-5.321	Yy1 Yy2
Wrnip1_Mta3_Rcor1	-5.504	Wrnip1 Mta3 Rcor1
Nrf1	-6.378	Nrf1

ISMARA

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Sample name: E175_BP_KO_4

Sorted z-values for every WM.