ISMARA results: day_28_donor

Sample name: day_28_donor_3

Sorted Z-values histogram for the sample day_28_donor_3

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	4.491	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MAFB.p2	4.339	MAFB
SNAI1..3.p2	4.159	SNAI2 SNAI1 SNAI3
IRF1,2,7.p3	3.696	IRF1 IRF2 IRF7
EHF.p2	2.850	EHF
ESRRA.p2	2.689	ESRRA
CDX1,2,4.p2	2.451	CDX1 CDX2 CDX4
NR3C1.p2	2.107	NR3C1
EOMES.p2	2.063	EOMES
CDC5L.p2	2.062	CDC5L
LHX3,4.p2	1.995	LHX3 LHX4
EGR1..3.p2	1.986	EGR3 EGR1 EGR2
NFE2.p2	1.929	NFE2
ELK1,4_GABP{A,B1}.p3	1.917	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
AAGUGCU	1.837
PRRX1,2.p2	1.822	PRRX2 PRRX1
GUGCAAA	1.713
POU1F1.p2	1.705	POU1F1
LMO2.p2	1.705	LMO2
AAGGCAC	1.678
NFKB1_REL_RELA.p2	1.663	RELA REL NFKB1
TFEB.p2	1.641	TFEB
TFCP2.p2	1.552	TFCP2
TFAP2B.p2	1.517	TFAP2B
CAGUGCA	1.493
GUAGUGU	1.421
NRF1.p2	1.415	NRF1
IKZF1.p2	1.395	IKZF1
CUCCCAA	1.388
HES1.p2	1.382	HES1
SPIB.p2	1.365	SPIB
ZBTB6.p2	1.353	ZBTB6
FOXN1.p2	1.344	FOXN1
CREB1.p2	1.329	CREB1
GUCAGUU	1.322
ACAUUCA	1.317
UCCCUUU	1.304
FOSL2.p2	1.287	FOSL2
CCCUGAG	1.244
PAX2.p2	1.200	PAX2
FOS_FOS{B,L1}_JUN{B,D}.p2	1.197	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
UCAAGUA	1.194
CAGCAGG	1.157
MYB.p2	1.139	MYB
FOXL1.p2	1.138	FOXL1
EBF1.p2	1.135	EBF1
ZEB1.p2	1.121	ZEB1
NR5A1,2.p2	1.114	NR5A1 NR5A2
KLF4.p3	1.103	KLF4
UUUUUGC	1.083
UCACAGU	1.072
SOX5.p2	1.046	SOX5
NKX3-1.p2	1.041	NKX3-1
TBX4,5.p2	1.012	TBX5 TBX4
UGCAUAG	0.998
GAUCAGA	0.986
ESR1.p2	0.974	ESR1
GCUGGUG	0.935
NFE2L2.p2	0.925	NFE2L2
GGCUCAG	0.925
PAX5.p2	0.888	PAX5
HOX{A5,B5}.p2	0.879	HOXB5 HOXA5
AAGGUGC	0.863
CCUUCAU	0.862
FOXP3.p2	0.851	FOXP3
POU6F1.p2	0.847	POU6F1
STAT5{A,B}.p2	0.810	STAT5B STAT5A
PPARG.p2	0.798	PPARG
GAUUGUC	0.778
HNF4A_NR2F1,2.p2	0.776	NR2F1 NR2F2 HNF4A
EWSR1-FLI1.p2	0.773	FLI1 EWSR1
AUUGCAC	0.768
ZBTB16.p2	0.755	ZBTB16
RORA.p2	0.727	RORA
NANOG.p2	0.701	NANOG
TLX2.p2	0.697	TLX2
STAT1,3.p3	0.672	STAT1 STAT3
GTF2A1,2.p2	0.654	GTF2A1 GTF2A2
AACACUG	0.639
AR.p2	0.597	AR
AAAGUGC	0.564
NKX2-1,4.p2	0.559	NKX2-1 NKX2-4
PAX4.p2	0.515	PAX4
HOX{A4,D4}.p2	0.515	HOXA4 HOXD4
ATF5_CREB3.p2	0.514	ATF5 CREB3
AAUGCCC	0.510
AAUCUCU	0.503
ELF1,2,4.p2	0.491	ELF2 ELF1 ELF4
SRY.p2	0.483	SRY
AUGGCAC	0.444
CACAGUG	0.444
POU3F1..4.p2	0.432	POU3F1 POU3F3 POU3F2 POU3F4
SPZ1.p2	0.431	SPZ1
TEAD1.p2	0.411	TEAD1 TEAD2 TEAD3 TEAD4
AIRE.p2	0.405	AIRE
PAX6.p2	0.405	PAX6
HSF1,2.p2	0.397	HSF1 HSF2
CCAGCAU	0.379
AUGUGCC	0.366
SPI1.p2	0.349	SPI1
CEBPA,B_DDIT3.p2	0.347	DDIT3 CEBPA CEBPB
ACUGCAU	0.343
NFIL3.p2	0.343	NFIL3
HOXA9_MEIS1.p2	0.329	MEIS1 HOXA9
HMGA1,2.p2	0.323	HMGA1 HMGA2
FOX{D1,D2}.p2	0.312	FOXD2 FOXD1
PBX1.p2	0.300	PBX1
UAAUGCU	0.296
GAUAUGU	0.294
NKX2-3_NKX2-5.p2	0.294	NKX2-5 NKX2-3
AAUCUCA	0.291
MEF2{A,B,C,D}.p2	0.290	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
CUACAGU	0.279
FOXO1,3,4.p2	0.252	FOXO1 FOXO4 FOXO3
NFIX.p2	0.250	NFIX
GUAAACA	0.247
HLF.p2	0.240	HLF
NR1H4.p2	0.239	NR1H4
YY1.p2	0.235	YY1
AGCUUAU	0.217
AACCUGG	0.215
AGGUAGU	0.214
ACUGGCC	0.203
CCAGUGU	0.199
FOX{I1,J2}.p2	0.188	FOXI1 FOXJ2
PITX1..3.p2	0.186	PITX2 PITX3 PITX1
UGUGCUU	0.164
ACCCUGU	0.159
UGACCUA	0.158
CGUGUCU	0.151
POU5F1_SOX2{dimer}.p2	0.150	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
RBPJ.p2	0.139	RBPJ
TP53.p2	0.127	TP53
PAX8.p2	0.119	PAX8
AGCAGCG	0.118
HIF1A.p2	0.118	HIF1A
GAGGUAG	0.111
GZF1.p2	0.109	GZF1
UGCAUUG	0.099
SREBF1,2.p2	0.099	SREBF1 SREBF2
MAZ.p2	0.089	MAZ
ATF2.p2	0.089	ATF2
GGACGGA	0.082
FOXQ1.p2	0.080	FOXQ1
REST.p3	0.068	REST
AACCGUU	0.066
AUGACAC	0.066
FOXD3.p2	0.061	FOXD3
NKX6-1,2.p2	0.056	NKX6-1 NKX6-2
PRDM1.p3	0.052	PRDM1
ACCCGUA	0.050
GAGAACU	0.038
SOX{8,9,10}.p2	0.035	SOX9 SOX8 SOX10
SMAD1..7,9.p2	0.034	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
AACGGAA	0.034
EVI1.p2	0.025	EVI1
VSX1,2.p2	-0.002	VSX2 VSX1
GGAAGAC	-0.004
RXRA_VDR{dimer}.p2	-0.004	VDR	$logo of RXRA_VDR{dimer}.p2$
NKX3-2.p2	-0.006	NKX3-2
NR4A2.p2	-0.008	NR4A2
ACAGUAC	-0.008
ARID5B.p2	-0.010	ARID5B
ACAGUAU	-0.010
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-0.010	ARNT MAX MYC USF1 BHLHB2 ARNT2
TAL1_TCF{3,4,12}.p2	-0.011	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
bHLH_family.p2	-0.013	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
NFE2L1.p2	-0.021	NFE2L1
UGAAAUG	-0.021
GGAAUGU	-0.025
UAAGACG	-0.025
T.p2	-0.028	T
PAX3,7.p2	-0.052	PAX7 PAX3
GGCAAGA	-0.056
UGUGCGU	-0.059
DBP.p2	-0.064	DBP
HBP1_HMGB_SSRP1_UBTF.p2	-0.085	HMGB2 HMGB3 SSRP1 UBTF HBP1
CRX.p2	-0.087	CRX
AGUGGUU	-0.087
NFATC1..3.p2	-0.101	NFATC3 NFATC2 NFATC1
SRF.p3	-0.103	SRF
GAGAUGA	-0.116
POU2F1..3.p2	-0.127	POU2F2 POU2F1 POU2F3
UUGGUCC	-0.133
ZNF148.p2	-0.159	ZNF148
AGCUGCC	-0.160
CGUACCG	-0.174
MSX1,2.p2	-0.177	MSX1 MSX2
CUUUGGU	-0.178
AUGGCUU	-0.208
GGAGUGU	-0.217
AAUACUG	-0.232
NKX2-2,8.p2	-0.236	NKX2-2 NKX2-8
UUGGCAA	-0.256
RXRG_dimer.p3	-0.256	NR1H2 RXRA PPARG PPARA RXRB RXRG
TFDP1.p2	-0.269	TFDP1
FOX{C1,C2}.p2	-0.272	FOXC1 FOXC2
CTCF.p2	-0.286	CTCF
ZFP161.p2	-0.288	ZFP161
GUAACAG	-0.321
UAAGACU	-0.337
UCCAGUU	-0.370
UUGUUCG	-0.379
HNF1A.p2	-0.379	HNF1A
TGIF1.p2	-0.417	TGIF1
UCACAUU	-0.433
DMAP1_NCOR{1,2}_SMARC.p2	-0.444	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
PDX1.p2	-0.458	PDX1
TCF4_dimer.p2	-0.512	TCF4
CUX2.p2	-0.530	CUX2
FOXA2.p3	-0.541	FOXA2
GCAGCAU	-0.546
BACH2.p2	-0.558	BACH2
ZNF384.p2	-0.591	ZNF384
LEF1_TCF7_TCF7L1,2.p2	-0.591	TCF7 TCF7L2 LEF1 TCF7L1
GCUACAU	-0.595
EP300.p2	-0.605	EP300
HIC1.p2	-0.607	HIC1
JUN.p2	-0.628	JUN JUND JUNB
AGCAGCA	-0.630
ZIC1..3.p2	-0.642	ZIC1 ZIC2 ZIC3
XBP1.p3	-0.705	XBP1
ONECUT1,2.p2	-0.727	ONECUT2 ONECUT1
ALX1.p2	-0.733	ALX1
UAUUGCU	-0.746
ZNF143.p2	-0.754	ZNF143
NHLH1,2.p2	-0.758	NHLH1 NHLH2
MYFfamily.p2	-0.760	MYOD1 MYF6 MYF5 MYOG
ATF6.p2	-0.764	ATF6
AHR_ARNT_ARNT2.p2	-0.771	ARNT AHR ARNT2
NANOG{mouse}.p2	-0.785	NANOG
ETS1,2.p2	-0.789	ETS2 ETS1
AGCACCA	-0.809
ZNF423.p2	-0.814	ZNF423
MYBL2.p2	-0.818	MYBL2
MTF1.p2	-0.819	MTF1
AACAGUC	-0.873
ADNP_IRX_SIX_ZHX.p2	-0.880	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
NR6A1.p2	-0.924	NR6A1
NFY{A,B,C}.p2	-0.932	NFYC NFYB NFYA
PATZ1.p2	-0.957	PATZ1
FOX{F1,F2,J1}.p2	-1.003	FOXF2 FOXJ1 FOXF1
GATA1..3.p2	-1.013	GATA1 GATA2 GATA3
MYOD1.p2	-1.038	MYOD1
KLF12.p2	-1.072	KLF12
IKZF2.p2	-1.086	IKZF2
ATF4.p2	-1.094	ATF4
MZF1.p2	-1.101	MZF1
POU5F1.p2	-1.106	POU5F1
AGUGCAA	-1.110
SP1.p2	-1.130	SP1
GLI1..3.p2	-1.167	GLI1 GLI2 GLI3
UUGGCAC	-1.330
SOX2.p2	-1.356	SOX2
HMX1.p2	-1.510	HMX1
RREB1.p2	-1.519	RREB1
GATA6.p2	-1.551	GATA6
RUNX1..3.p2	-1.563	RUNX1 RUNX3 RUNX2
HAND1,2.p2	-1.583	HAND1 HAND2
TFAP2{A,C}.p2	-1.620	TFAP2C TFAP2A
FEV.p2	-1.795	FEV
GFI1.p2	-1.826	GFI1
TBP.p2	-1.868	TBP
TLX1..3_NFIC{dimer}.p2	-1.958	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
EN1,2.p2	-2.007	EN1 EN2
GFI1B.p2	-2.030	GFI1B
STAT2,4,6.p2	-2.092	STAT2 STAT4 STAT6
BPTF.p2	-2.143	BPTF
TFAP4.p2	-2.159	TFAP4
SOX17.p2	-2.353	SOX17
GGCAGUG	-2.604
ZNF238.p2	-2.953	ZNF238
GTF2I.p2	-3.113	GTF2I
HOX{A6,A7,B6,B7}.p2	-3.643	HOXB6 HOXA7 HOXB7 HOXA6
RXR{A,B,G}.p2	-5.109	RXRA RXRB RXRG
E2F1..5.p2	-5.630	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: day_28_donor_3

Sorted z-values for every WM.