ISMARA results for GSE58827: Dynamics of the Mouse Liver

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
E2f1 5.255 E2f1
E2f2_E2f5 5.213 E2f2
E2f5
Nr2e1 4.869 Nr2e1
Hnf4a 4.782 Hnf4a
Gata2_Gata1 4.260 Gata2
Gata1
Ybx1_Nfya_Nfyb_Nfyc_Cebpz 4.219 Ybx1
Nfya
Nfyb
Nfyc
Cebpz
Tal1 4.006 Tal1
Nrf1 3.804 Nrf1
Pou1f1 3.623 Pou1f1
Hcfc1_Six5_Smarcc2_Zfp143 3.596 Hcfc1
Six5
Smarcc2
Zfp143
Tbp 3.291 Tbp
Wrnip1_Mta3_Rcor1 3.287 Wrnip1
Mta3
Rcor1
Taf1 3.142 Taf1
Spic 3.093 Spic
Maz_Zfp281 3.066 Maz
Zfp281
Tfdp1_Wt1_Egr2 3.034 Tfdp1
Wt1
Egr2
Pparg_Rxrg 2.976 Pparg
Rxrg
Cebpe 2.956 Cebpe
E2f4 2.929 E2f4
Yy1_Yy2 2.907 Yy1
Yy2
Chd1_Pml 2.906 Chd1
Pml
Spib 2.804 Spib
Erg 2.804 Erg
Spi1 2.776 Spi1
Runx2_Bcl11a 2.774 Runx2
Bcl11a
Irf2_Irf1_Irf8_Irf9_Irf7 2.756 Irf2
Irf1
Irf8
Irf9
Irf7
Gata5 2.752 Gata5
Zbtb33_Chd2 2.681 Zbtb33
Chd2
Sox2 2.609 Sox2
Zfp110 2.600 Zfp110
Klf1 2.559 Klf1
Klf4_Sp3 2.556 Klf4
Sp3
Hnf4g 2.522 Hnf4g
Hdx 2.477 Hdx
Elf1_Elf2_Etv2_Elf4 2.475 Elf1
Elf2
Etv2
Elf4
Foxp1_Foxj2 2.451 Foxp1
Foxj2
Gata4 2.437 Gata4
Bptf 2.423 Bptf
Sp1 2.423 Sp1
Hnf1b 2.402 Hnf1b
Etv1_Etv5_Gabpa 2.299 Etv1
Etv5
Gabpa
Zfx_Zfp711 2.290 Zfx
Zfp711
Myb 2.288 Myb
Myf6 2.255 Myf6
Dlx1 2.247 Dlx1
Snai1_Zeb1_Snai2 2.233 Snai1
Zeb1
Snai2
Hes5_Hes7 2.231 Hes5
Hes7
Pitx2_Otx2 2.179 Pitx2
Otx2
Foxj3_Tbl1xr1 2.167 Foxj3
Tbl1xr1
Elf5 2.151 Elf5
Foxa2_Foxa1 2.032 Foxa2
Foxa1
Ebf3 2.001 Ebf3
Mybl1 2.000 Mybl1
Ebf1 1.996 Ebf1
Ebf1
Mef2d_Mef2a 1.988 Mef2d
Mef2a
Hic2 1.971 Hic2
Hoxb7 1.960 Hoxb7
Nr1i3 1.959 Nr1i3
Six6 1.958 Six6
Nfil3_Tef 1.911 Nfil3
Tef
Nfia 1.880 Nfia
Tgif1_Meis3 1.876 Tgif1
Meis3
Nkx3-1 1.875 Nkx3-1
Esr2 1.843 Esr2
Fos 1.839 Fos
Zbtb18 1.822 Zbtb18
Nr2c2 1.809 Nr2c2
Ets1 1.803 Ets1
Hoxa13 1.782 Hoxa13
Plag1 1.765 Plag1
Tfcp2 1.736 Tfcp2
Mybl2 1.713 Mybl2
Nr5a2 1.704 Nr5a2
Hoxa2 1.698 Hoxa2
Hnf1a 1.688 Hnf1a
Smad1 1.678 Smad1
Tfap2c 1.677 Tfap2c
Myod1 1.664 Myod1
Tead3_Tead4 1.655 Tead3
Tead4
Sox18_Sox12 1.650 Sox18
Sox12
Mecp2 1.648 Mecp2
GUAAACA 1.641 mmu-miR-30a-5p
mmu-miR-30b-5p
mmu-miR-30c-5p
mmu-miR-30d-5p
mmu-miR-30e-5p
mmu-miR-384-5p
AAGGCAC 1.617 mmu-miR-124-3p.1
ACAUUCA 1.594 mmu-miR-181a-5p
mmu-miR-181b-5p
mmu-miR-181c-5p
mmu-miR-181d-5p
Nr1h4 1.590 Nr1h4
Hoxb13 1.566 Hoxb13
Max_Mycn 1.560 Max
Mycn
Ets2 1.523 Ets2
Gli3_Zic1 1.521 Gli3
Zic1
Nr2f1_Nr4a1 1.500 Nr2f1
Nr4a1
E2f8 1.494 E2f8
Pou3f4 1.494 Pou3f4
Hmx1 1.481 Hmx1
Cebpb 1.481 Cebpb
Atf3 1.479 Atf3
Klf16_Sp8 1.473 Klf16
Sp8
Sox4 1.471 Sox4
Etv4 1.465 Etv4
Olig2_Olig3 1.464 Olig2
Olig3
Ptf1a 1.452 Ptf1a
Id4 1.444 Id4
Creb1 1.441 Creb1
Pou2f2_Pou3f1 1.419 Pou2f2
Pou3f1
Etv3_Erf_Fev_Elk4_Elk1_Elk3 1.411 Etv3
Erf
Fev
Elk4
Elk1
Elk3
E2f7 1.400 E2f7
Hoxd11_Cdx1_Hoxc11 1.400 Hoxd11
Cdx1
Hoxc11
Tbx19 1.392 Tbx19
Zbtb14 1.385 Zbtb14
Prdm1 1.384 Prdm1
Arntl_Tfe3_Mlx_Mitf_Mlxipl_Tfec 1.382 Arntl
Tfe3
Mlx
Mitf
Mlxipl
Tfec
Cux1 1.379 Cux1
Nfe2_Bach1_Mafk 1.378 Nfe2
Bach1
Mafk
Stat2 1.376 Stat2
Tcf3 1.373 Tcf3
Tbx5 1.370 Tbx5
Hic1 1.354 Hic1
Creb3 1.349 Creb3
Myog_Tcf12 1.346 Myog
Tcf12
Tbx2 1.346 Tbx2
Fli1 1.343 Fli1
AGCACCA 1.342 mmu-miR-29a-3p
mmu-miR-29b-3p
mmu-miR-29c-3p
Twist1 1.337 Twist1
GAGGUAG 1.336 mmu-let-7a-5p
mmu-let-7b-5p
mmu-let-7c-5p
mmu-let-7d-5p
mmu-let-7e-5p
mmu-let-7f-5p
mmu-let-7g-5p
mmu-let-7i-5p
mmu-let-7k
mmu-miR-98-5p
mmu-miR-1961
AAUACUG 1.336 mmu-miR-200b-3p
mmu-miR-200c-3p
mmu-miR-429-3p
Ezh2_Atf2_Ikzf1 1.327 Ezh2
Atf2
Ikzf1
Epas1_Bcl3 1.323 Epas1
Bcl3
Nanog 1.321 Nanog
Stat5a 1.318 Stat5a
E2f3 1.304 E2f3
GGAAUGU 1.294 mmu-miR-1a-3p
mmu-miR-206-3p
mmu-miR-1957b
mmu-miR-6349
mmu-miR-6382
Nkx6-2 1.288 Nkx6-2
Hbp1 1.276 Hbp1
Pitx3 1.275 Pitx3
Gfi1_Gfi1b 1.271 Gfi1
Gfi1b
Cebpd 1.267 Cebpd
Nfatc1 1.265 Nfatc1
Thrb 1.263 Thrb
Jun 1.260 Jun
Hoxb8_Pdx1 1.257 Hoxb8
Pdx1
Ar 1.257 Ar
Zbtb4 1.255 Zbtb4
Nfic_Nfib 1.254 Nfic
Nfib
Etv6 1.253 Etv6
UUGGCAA 1.249 mmu-miR-182-5p
Nr1i2 1.240 Nr1i2
Tcf7_Tcf7l2 1.239 Tcf7
Tcf7l2
Runx1 1.233 Runx1
Grhl1 1.220 Grhl1
Atf4 1.216 Atf4
Nkx2-5 1.213 Nkx2-5
Hoxa6 1.209 Hoxa6
Pax5 1.207 Pax5
Gata3 1.202 Gata3
Tfeb_Usf1_Srebf1_Usf2_Bhlhe41_Srebf2 1.191 Tfeb
Usf1
Srebf1
Usf2
Bhlhe41
Srebf2
Elf3 1.188 Elf3
Hoxa4 1.182 Hoxa4
Ubp1 1.180 Ubp1
Isl2 1.179 Isl2
Rad21_Smc3 1.178 Rad21
Smc3
Neurog2 1.171 Neurog2
Prop1 1.168 Prop1
Mef2c 1.159 Mef2c
Neurod1 1.154 Neurod1
Trp53 1.132 Trp53
Stat6 1.126 Stat6
Pbx2 1.123 Pbx2
Meis1 1.122 Meis1
Hinfp 1.119 Hinfp
GUGCAAA 1.117 mmu-miR-19a-3p
mmu-miR-19b-3p
Hsf4 1.114 Hsf4
Nr2f2 1.113 Nr2f2
Pax2 1.108 Pax2
Rfx3_Rfx1_Rfx4 1.106 Rfx3
Rfx1
Rfx4
Tbx21 1.105 Tbx21
Lhx2_Hoxc5 1.104 Lhx2
Hoxc5
Irf3 1.103 Irf3
Pou2f1 1.101 Pou2f1
Maf_Nrl 1.098 Maf
Nrl
Cpeb1 1.097 Cpeb1
Hand1 1.089 Hand1
Obox6_Obox5 1.089 Obox6
Obox5
Nfatc2 1.086 Nfatc2
Sox14 1.086 Sox14
Tcf4_Mesp1 1.083 Tcf4
Mesp1
Klf12_Klf14_Sp4 1.083 Klf12
Klf14
Sp4
Cebpa_Cebpg 1.080 Cebpa
Cebpg
Nfatc3 1.072 Nfatc3
ACAGUAU 1.069 mmu-miR-144-3p
AAAGUGC 1.066 mmu-miR-17-5p
mmu-miR-20a-5p
mmu-miR-20b-5p
mmu-miR-93-5p
mmu-miR-106a-5p
mmu-miR-106b-5p
mmu-miR-6383
Hif1a 1.057 Hif1a
Foxf2 1.051 Foxf2
Nr2f6 1.049 Nr2f6
Zbtb16 1.045 Zbtb16
Mtf1 1.042 Mtf1
Hmga1 1.031 Hmga1
Mafb 1.030 Mafb
Hoxa5 1.028 Hoxa5
Nkx2-2 1.026 Nkx2-2
Hoxb5 1.024 Hoxb5
Egr1 1.022 Egr1
Arnt 1.020 Arnt
Dmc1 1.019 Dmc1
Hmga2 1.015 Hmga2
Meis2 1.013 Meis2
En1 1.010 En1
Foxc2 1.009 Foxc2
Srf 1.004 Srf
Gcm2 1.003 Gcm2
Hey1_Myc_Mxi1 1.000 Hey1
Myc
Mxi1
Hoxa10 0.999 Hoxa10
Nr2e3 0.993 Nr2e3
Bcl6 0.991 Bcl6
Smarcc1_Fosl1 0.976 Smarcc1
Fosl1
Zic2 0.974 Zic2
Foxf1 0.964 Foxf1
Foxa3 0.962 Foxa3
Zbtb7a 0.957 Zbtb7a
Ahr 0.956 Ahr
Foxd1 0.956 Foxd1
Hsfy2 0.955 Hsfy2
Rest 0.955 Rest
E2f6 0.955 E2f6
Gtf2i_Gtf2f1 0.954 Gtf2i
Gtf2f1
Vsx2_Dlx3 0.954 Vsx2
Dlx3
Gli2 0.953 Gli2
Prdm14 0.951 Prdm14
Atf7_E4f1 0.949 Atf7
Atf7
E4f1
Sp100 0.946 Sp100
Mga 0.946 Mga
Gmeb1 0.944 Gmeb1
Nr1h2 0.944 Nr1h2
Obox1 0.941 Obox1
Rela_Rel_Nfkb1 0.932 Rela
Rel
Nfkb1
AUUGCAC 0.930 mmu-miR-25-3p
mmu-miR-32-5p
mmu-miR-92a-3p
mmu-miR-92b-3p
mmu-miR-363-3p
mmu-miR-367-3p
Ppara 0.930 Ppara
Pou4f1_Pou6f1 0.925 Pou4f1
Pou6f1
Foxo6 0.923 Foxo6
Nkx3-2 0.922 Nkx3-2
Homez 0.916 Homez
Lhx5_Lmx1b_Lhx1 0.914 Lhx5
Lmx1b
Lhx1
Egr3 0.913 Egr3
Rxra 0.910 Rxra
Hmbox1 0.910 Hmbox1
Zfp282 0.910 Zfp282
Sox5_Sry 0.905 Sox5
Sry
Zfp219_Zfp740 0.904 Zfp219
Zfp740
Creb3l2 0.903 Creb3l2
Mbd2 0.902 Mbd2
Stat4_Stat3_Stat5b 0.897 Stat4
Stat3
Stat5b
Insm1 0.891 Insm1
Maff 0.890 Maff
Zbtb7b 0.888 Zbtb7b
En2 0.886 En2
Gmeb2 0.885 Gmeb2
Lhx8 0.883 Lhx8
Pou2f3 0.882 Pou2f3
UCACAUU 0.882 mmu-miR-23a-3p
mmu-miR-23b-3p
AGGUAGU 0.881 mmu-miR-196a-5p
mmu-miR-196b-5p
Rara 0.868 Rara
Lef1 0.865 Lef1
Mzf1 0.865 Mzf1
Zfp524 0.862 Zfp524
Onecut1_Cux2 0.862 Onecut1
Cux2
Cux2
Pgr_Nr3c1 0.861 Pgr
Nr3c1
Hey2 0.857 Hey2
Tcf7l1 0.856 Tcf7l1
Pou3f2 0.852 Pou3f2
UUGGUCC 0.852 mmu-miR-133a-3p.2
mmu-miR-133b-3p
mmu-miR-133c
Ascl2 0.850 Ascl2
Msx2_Hoxd4 0.848 Msx2
Foxk1_Foxj1 0.848 Foxk1
Foxj1
Tcf21_Msc 0.847 Tcf21
Msc
Rarg 0.835 Rarg
Figla 0.834 Figla
Emx1_Emx2 0.834 Emx1
Emx2
Nfix 0.833 Nfix
Vsx1_Uncx_Prrx2_Shox2_Noto 0.826 Vsx1
Uncx
Prrx2
Shox2
Noto
ACAGUAC 0.826 mmu-miR-101a-3p.1
Sox30 0.825 Sox30
Gsx2_Hoxd3_Vax1 0.822 Gsx2
Hoxd3
Vax1
AACACUG 0.820 mmu-miR-141-3p
mmu-miR-200a-3p
Nkx2-3 0.820 Nkx2-3
AAGUGCU 0.815 mmu-miR-291a-3p
mmu-miR-294-3p
mmu-miR-295-3p
mmu-miR-302a-3p
mmu-miR-302b-3p
mmu-miR-302d-3p
Crx_Gsc 0.815 Crx
Gsc
Zfp148 0.810 Zfp148
Klf15 0.807 Klf15
Prox1 0.806 Prox1
Foxi1_Foxo1 0.805 Foxi1
Foxo1
Tead1 0.804 Tead1
Pou3f3 0.802 Pou3f3
Pou5f1 0.802 Pou5f1
Sox21 0.801 Sox21
Smad4 0.801 Smad4
Six4 0.801 Six4
Ikzf2 0.798 Ikzf2
Onecut2_Onecut3 0.797 Onecut2
Onecut3
Rhox4e_Rhox6_Vax2 0.794 Rhox4e
Rhox6
Vax2
Nkx2-1 0.794 Nkx2-1
Mecom 0.793 Mecom
Dlx5_Dlx4 0.791 Dlx5
Dlx4
Tfap2b 0.789 Tfap2b
Mef2b 0.786 Mef2b
Tlx1 0.786 Tlx1
Foxb1 0.785 Foxb1
Zbtb12 0.782 Zbtb12
UGAAAUG 0.780 mmu-miR-203-3p.1
CUUUGGU 0.779 mmu-miR-9-5p
Zfp263 0.777 Zfp263
Zic3 0.777 Zic3
Tbx4 0.775 Tbx4
Zkscan3 0.774 Zkscan3
Ctcfl_Ctcf 0.767 Ctcfl
Ctcf
UCCAGUU 0.766 mmu-miR-145a-5p
mmu-miR-145b
Tfap4 0.765 Tfap4
Smad3 0.765 Smad3
Zkscan1 0.763 Zkscan1
Prrx1_Isx_Prrxl1 0.763 Prrx1
Isx
Prrxl1
Sin3a 0.762 Sin3a
Plagl1 0.761 Plagl1
Rreb1 0.759 Rreb1
Atf1_Creb5 0.759 Atf1
Creb5
Nr0b1 0.758 Nr0b1
Esr1 0.757 Esr1
Glis2 0.755 Glis2
Gsc2_Dmbx1 0.753 Gsc2
Dmbx1
Rarb 0.746 Rarb
Hmx2 0.742 Hmx2
Mafa 0.742 Mafa
Esrrb_Esrra 0.741 Esrrb
Esrra
Tfap2a 0.741 Tfap2a
Klf6_Patz1 0.739 Klf6
Patz1
Tbr1 0.738 Tbr1
Gcm1 0.736 Gcm1
Sox1 0.731 Sox1
AGUGCAA 0.729 mmu-miR-130a-3p
mmu-miR-130b-3p
mmu-miR-130c
mmu-miR-301a-3p
mmu-miR-301b-3p
mmu-miR-721
mmu-miR-6341
mmu-miR-6389
Scrt1 0.729 Scrt1
Zfp652 0.727 Zfp652
Klf7 0.726 Klf7
Hoxc10 0.725 Hoxc10
Nhlh1 0.722 Nhlh1
Zfp784 0.721 Zfp784
Neurod2_Bhlha15_Bhlhe22_Olig1 0.720 Neurod2
Bhlha15
Bhlhe22
Olig1
Hoxd12 0.718 Hoxd12
GUAGUGU 0.718 mmu-miR-142a-3p.1
UCACAGU 0.716 mmu-miR-27a-3p
mmu-miR-27b-3p
Pknox2_Pknox1 0.713 Pknox2
Pknox1
UGUGCUU 0.713 mmu-miR-218-5p
mmu-miR-7002-3p
Gsx1_Alx1_Mixl1_Lbx2 0.712 Gsx1
Alx1
Mixl1
Lbx2
Otx1 0.709 Otx1
Gbx1_Nobox_Alx3 0.707 Gbx1
Nobox
Alx3
Pax7 0.707 Pax7
Arid3a 0.707 Arid3a
Mnt 0.704 Mnt
Stat1 0.703 Stat1
Runx3 0.703 Runx3
Nkx6-3_Dbx2_Barx2 0.702 Nkx6-3
Dbx2
Barx2
Hoxa9_Hoxb9 0.701 Hoxa9
Hoxb9
Pou6f2_Pou4f2 0.699 Pou6f2
Pou4f2
Zbtb49 0.699 Zbtb49
Rfx2_Rfx7 0.698 Rfx2
Rfx7
Hlf 0.697 Hlf
Pitx1 0.692 Pitx1
Nr2c1 0.692 Nr2c1
AUGGCAC 0.689 mmu-miR-183-5p
Nr6a1 0.689 Nr6a1
Hoxa11_Hoxc12 0.687 Hoxa11
Hoxc12
UAUUGCU 0.681 mmu-miR-137-3p
Clock 0.680 Clock
Crem_Jdp2 0.680 Crem
Jdp2
Hoxd9 0.679 Hoxd9
Meox2 0.678 Meox2
Nfe2l1_Mafg 0.678 Nfe2l1
Mafg
Mafg
GCAGCAU 0.675 mmu-miR-103-3p
mmu-miR-107-3p
UGCAUAG 0.673 mmu-miR-153-3p
Tgif2_Tgif2lx1_Tgif2lx2 0.671 Tgif2
Tgif2lx1
Tgif2lx2
Irx5 0.670 Irx5
Foxc1 0.667 Foxc1
Zfp691 0.664 Zfp691
Pax3 0.664 Pax3
Foxq1 0.663 Foxq1
Hsf2 0.662 Hsf2
T 0.661 T
Cdx2 0.660 Cdx2
Rhox11 0.659 Rhox11
Hivep1 0.658 Hivep1
Hoxd8 0.658 Hoxd8
Ep300 0.658 Ep300
Klf8 0.655 Klf8
Thra 0.654 Thra
Hes1 0.653 Hes1
Nkx6-1_Evx1_Hesx1 0.653 Nkx6-1
Evx1
Hesx1
Gzf1 0.653 Gzf1
Zfp384 0.653 Zfp384
Nr4a2 0.653 Nr4a2
Aire 0.651 Aire
Sox3_Sox10 0.650 Sox3
Sox10
Hoxb2_Dlx2 0.649 Hoxb2
Dlx2
CACAGUG 0.647 mmu-miR-128-3p
mmu-miR-6539
Zbtb7c 0.645 Zbtb7c
Vdr 0.639 Vdr
Nr4a3 0.637 Nr4a3
Irf5_Irf6 0.637 Irf5
Irf6
Tlx2 0.633 Tlx2
Foxp2_Foxp3 0.632 Foxp2
Foxp3
Brca1 0.632 Brca1
Alx4 0.631 Alx4
Tbx1_Eomes 0.629 Tbx1
Eomes
Hoxb3 0.628 Hoxb3
Phox2a 0.628 Phox2a
Esrrg 0.626 Esrrg
Irx6_Irx2_Irx3 0.626 Irx6
Irx2
Irx3
AGCAGCA 0.624 mmu-miR-15a-5p
mmu-miR-15b-5p
mmu-miR-16-5p
mmu-miR-195a-5p
mmu-miR-195b
mmu-miR-322-5p
mmu-miR-497a-5p
mmu-miR-1907
mmu-miR-6342
mmu-miR-6353
mmu-miR-6419
Foxo4 0.623 Foxo4
Cenpb 0.622 Cenpb
Klf13 0.622 Klf13
Six3_Six1_Six2 0.620 Six3
Six1
Six2
Spdef 0.618 Spdef
Nfe2l2 0.615 Nfe2l2
CAGUGCA 0.615 mmu-miR-148a-3p
mmu-miR-148b-3p
mmu-miR-152-3p
Sox17 0.606 Sox17
Zbtb6 0.605 Zbtb6
Zfhx3 0.605 Zfhx3
Hoxb1 0.604 Hoxb1
Batf 0.598 Batf
Fubp1 0.598 Fubp1
Zscan4c 0.593 Zscan4c
Xbp1_Creb3l1 0.589 Xbp1
Creb3l1
Atf5 0.585 Atf5
Glis3 0.585 Glis3
Glis3
Tfcp2l1 0.584 Tfcp2l1
Nfat5 0.582 Nfat5
Msx1_Lhx9_Barx1_Rax_Dlx6 0.582 Msx1
Lhx9
Barx1
Rax
Dlx6
Bsx 0.581 Bsx
Nkx2-6 0.580 Nkx2-6
Nkx2-4 0.578 Nkx2-4
Tfap2d 0.577 Tfap2d
Ddit3 0.577 Ddit3
Hoxb6 0.576 Hoxb6
GUAACAG 0.574 mmu-miR-194-5p
Foxl1 0.574 Foxl1
Foxl1
AUGGCUU 0.573 mmu-miR-135a-5p
mmu-miR-135b-5p
Rora 0.568 Rora
Tbx15 0.561 Tbx15
Sox7 0.560 Sox7
Junb_Jund 0.559 Junb
Jund
Msx3 0.557 Msx3
Nfkb2 0.555 Nfkb2
Rfx5 0.555 Rfx5
Dbp 0.554 Dbp
Nkx2-9 0.554 Nkx2-9
Sox15 0.553 Sox15
Mnx1_Lhx6_Lmx1a 0.551 Mnx1
Lhx6
Lmx1a
Gli1 0.549 Gli1
Barhl2 0.548 Barhl2
Foxm1 0.543 Foxm1
Bcl6b 0.541 Bcl6b
Zfp128 0.540 Zfp128
Ppard 0.536 Ppard
Bhlhe40 0.533 Bhlhe40
CCCUGAG 0.532 mmu-miR-125a-5p
mmu-miR-125b-5p
mmu-miR-351-5p
mmu-miR-6367
mmu-miR-6394
AAUGCCC 0.530 mmu-miR-365-3p
Hoxc9 0.528 Hoxc9
Rbpj 0.525 Rbpj
Foxd2 0.523 Foxd2
Hoxb4 0.520 Hoxb4
Lhx3 0.518 Lhx3
GUCAGUU 0.518 mmu-miR-223-3p
Sox6_Sox9 0.517 Sox6
Sox9
Trp63 0.517 Trp63
Gata6 0.512 Gata6
Sox13 0.512 Sox13
Nkx1-1_Nkx1-2 0.506 Nkx1-1
Nkx1-2
Obox3 0.506 Obox3
Zic4 0.504 Zic4
Pou4f3 0.504 Pou4f3
Scrt2 0.500 Scrt2
Pbx1_Pbx3 0.498 Pbx1
Pbx3
Zbtb3 0.497 Zbtb3
AGUGGUU 0.496 mmu-miR-140-5p
mmu-miR-876-3p
CCUUCAU 0.495 mmu-miR-205-5p
Trp73 0.492 Trp73
Hoxd1 0.491 Hoxd1
Rxrb 0.490 Rxrb
Cbfb 0.488 Cbfb
Zfp410 0.481 Zfp410
Foxg1 0.479 Foxg1
Lhx4 0.478 Lhx4
GCUGGUG 0.474 mmu-miR-138-5p
Hsf1 0.472 Hsf1
Cdc5l 0.469 Cdc5l
Meox1 0.467 Meox1
Foxo3 0.465 Foxo3
Barhl1 0.462 Barhl1
Batf3 0.462 Batf3
GGCUCAG 0.454 mmu-miR-24-3p
mmu-miR-5124b
mmu-miR-6361
mmu-miR-6369
mmu-miR-6410
mmu-miR-6413
Arid5b 0.454 Arid5b
Hoxc4_Arx_Otp_Esx1_Phox2b 0.447 Hoxc4
Arx
Otp
Esx1
Phox2b
Tbx3 0.447 Tbx3
Fosl2_Bach2 0.445 Fosl2
Bach2
Atf6 0.443 Atf6
UUGGCAC 0.442 mmu-miR-96-5p
GGAGUGU 0.441 mmu-miR-122-5p
CCAGUGU 0.440 mmu-miR-199a-5p
mmu-miR-199b-5p
Hoxc6 0.439 Hoxc6
Hoxc13_Hoxd13 0.439
AGCUGCC 0.439 mmu-miR-22-3p
GGCAGUG 0.439 mmu-miR-34a-5p
mmu-miR-34b-5p
mmu-miR-34c-5p
mmu-miR-449a-5p
mmu-miR-449b
mmu-miR-449c-5p
ACUGCAU 0.436 mmu-miR-217-5p
Evx2 0.435 Evx2
Foxn1 0.428 Foxn1
Hoxa1 0.428 Hoxa1
Fosb 0.423 Fosb
Osr2_Osr1 0.420 Osr2
Osr1
Nfatc4 0.420 Nfatc4
Sox11 0.417 Sox11
UUGUUCG 0.412 mmu-miR-375-3p
Pax6 0.400 Pax6
Tfap2e 0.394 Tfap2e
UAAUGCU 0.390 mmu-miR-155-5p
Sp2 0.389 Sp2
Tbx20 0.389 Tbx20
Hoxa7_Hoxc8 0.382 Hoxa7
Hoxc8
Pax1_Pax9 0.381 Pax1
Pax9
GAUUGUC 0.374 mmu-miR-219a-5p
Isl1 0.373 Isl1
Sox8 0.370 Sox8
Rorc_Nr1d1 0.368 Rorc
Nr1d1
Gbx2 0.361 Gbx2
Zfp423 0.358 Zfp423
Pax4 0.356 Pax4
Arid5a 0.353 Arid5a
Foxd3 0.353 Foxd3
Egr4 0.349 Egr4
AGCUUAU 0.346 mmu-miR-21a-5p
mmu-miR-21c
mmu-miR-590-5p
Hoxd10 0.343 Hoxd10
GGCAAGA 0.340 mmu-miR-31-5p
Irf4 0.338 Irf4
Smad2 0.336 Smad2
AAGGUGC 0.335 mmu-miR-18a-5p
mmu-miR-18b-5p
Cxxc1 0.331 Cxxc1
GGAAGAC 0.326 mmu-miR-7a-5p
mmu-miR-7b-5p
Relb 0.324 Relb
AGCAGCG 0.314 mmu-miR-503-5p
Bbx 0.308 Bbx
UAAGACG 0.299 mmu-miR-208a-3p
mmu-miR-208b-3p
Hmx3 0.295 Hmx3
Irx4 0.295 Irx4
GCUACAU 0.291 mmu-miR-221-3p
mmu-miR-222-3p
mmu-miR-1928
ACCCUGU 0.289 mmu-miR-10a-5p
mmu-miR-10b-5p
ACUGGCC 0.288 mmu-miR-193a-3p
mmu-miR-193b-3p
Pax8 0.283 Pax8
Zfp105 0.281 Zfp105
UGCAUUG 0.278 mmu-miR-33-5p
Nr3c2 0.273 Nr3c2
AACAGUC 0.272 mmu-miR-132-3p
mmu-miR-212-3p
Arnt2 0.264 Arnt2
Hoxa3 0.262 Hoxa3
UAAGACU 0.261 mmu-miR-499-5p
Ovol1 0.260 Ovol1
Atoh1_Bhlhe23 0.257 Atoh1
Bhlhe23
Hlx 0.235 Hlx
Klf3 0.228 Klf3
GAUCAGA 0.212 mmu-miR-383-5p.1
Ehf 0.208 Ehf
Prdm4 0.200 Prdm4
UCCCUUU 0.194 mmu-miR-204-5p
mmu-miR-211-5p
mmu-miR-7670-3p
GAGAUGA 0.178 mmu-miR-143-3p
AUGUGCC 0.159 mmu-miR-455-5p
mmu-miR-5129-3p
GAUAUGU 0.150 mmu-miR-190a-5p
mmu-miR-190b-5p
UGACCUA 0.149 mmu-miR-192-5p
mmu-miR-215-5p
Glis1 0.131 Glis1
CCAGCAU 0.116 mmu-miR-338-3p
AAUCUCU 0.109 mmu-miR-216b-5p
AACGGAA 0.104 mmu-miR-191-5p
GAGAACU 0.092 mmu-miR-146a-5p
mmu-miR-146b-5p
AACCUGG 0.090 mmu-miR-490-3p
UGUGCGU 0.087 mmu-miR-210-3p
AUGACAC 0.066 mmu-miR-425-5p
mmu-miR-489-3p
CGUGUCU 0.058 mmu-miR-187-3p
CUACAGU 0.050 mmu-miR-139-5p
AAUCUCA 0.031 mmu-miR-216a-5p
AACCGUU 0.029 mmu-miR-451a
GGACGGA 0.012 mmu-miR-184-3p
CUCCCAA 0.003 mmu-miR-150-5p
mmu-miR-5127

All samples sorted alphabetically


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Sample name Condition Replicate/Batch
Day_-002_rep1
Day_-002_rep2
Day_-002_rep3
Day_00_rep1
Day_00_rep2
Day_00_rep3
Day_01_rep1
Day_01_rep2
Day_01_rep3
Day_03_rep1
Day_03_rep2
Day_03_rep3
Day_05_rep1
Day_05_rep2
Day_05_rep3
Day_10_rep1
Day_10_rep2
Day_10_rep3
Day_15_rep1
Day_15_rep2
Day_15_rep3
Day_20_rep1
Day_20_rep2
Day_20_rep3
Day_25_rep1
Day_25_rep2
Day_25_rep3
Day_30_rep1
Day_30_rep2
Day_30_rep3
Day_45_rep1
Day_45_rep2
Day_45_rep3
Day_60_rep1
Day_60_rep2
Day_60_rep3