ISMARA results: GNF_1_CerebellumPeduncles

Sample name: GNF_1_CerebellumPeduncles

Sorted Z-values histogram for the sample GNF_1_CerebellumPeduncles

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
CUCCCAA	6.828
REST.p3	5.703	REST
GGCAGUG	4.865
GTF2I.p2	4.618	GTF2I
KLF12.p2	4.606	KLF12
GATA1..3.p2	4.529	GATA1 GATA2 GATA3
RREB1.p2	4.449	RREB1
ZFP161.p2	4.140	ZFP161
JUN.p2	4.026	JUN JUND JUNB
UGUGCUU	4.002
MYOD1.p2	4.001	MYOD1
HIC1.p2	3.853	HIC1
TGIF1.p2	3.801	TGIF1
GGAAGAC	3.796
RFX1..5_RFXANK_RFXAP.p2	3.573	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
MZF1.p2	3.500	MZF1
MTF1.p2	3.480	MTF1
MEF2{A,B,C,D}.p2	3.387	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
HOX{A5,B5}.p2	3.256	HOXB5 HOXA5
HOX{A6,A7,B6,B7}.p2	3.146	HOXB6 HOXA7 HOXB7 HOXA6
CAGCAGG	3.107
SPZ1.p2	2.942	SPZ1
UAUUGCU	2.929
ZIC1..3.p2	2.884	ZIC1 ZIC2 ZIC3
AUGGCUU	2.804
MAFB.p2	2.802	MAFB
TAL1_TCF{3,4,12}.p2	2.777	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
NHLH1,2.p2	2.773	NHLH1 NHLH2
SRY.p2	2.751	SRY
UUUUUGC	2.662
UUGGUCC	2.650
EGR1..3.p2	2.584	EGR3 EGR1 EGR2
EVI1.p2	2.455	EVI1
POU5F1.p2	2.450	POU5F1
GGCUCAG	2.438
FOXP3.p2	2.415	FOXP3
UGCAUAG	2.404
FOX{I1,J2}.p2	2.369	FOXI1 FOXJ2
EBF1.p2	2.338	EBF1
HAND1,2.p2	2.321	HAND1 HAND2
CACAGUG	2.252
AACAGUC	2.252
NR5A1,2.p2	2.221	NR5A1 NR5A2
AAAGUGC	2.203
TFCP2.p2	2.186	TFCP2
ZBTB6.p2	2.175	ZBTB6
SMAD1..7,9.p2	2.154	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
LMO2.p2	2.147	LMO2
ATF2.p2	2.133	ATF2
CCAGCAU	2.125
GCUGGUG	2.108
GTF2A1,2.p2	2.073	GTF2A1 GTF2A2
SOX{8,9,10}.p2	1.913	SOX9 SOX8 SOX10
GCUACAU	1.861
SNAI1..3.p2	1.844	SNAI2 SNAI1 SNAI3
ACUGGCC	1.836
TCF4_dimer.p2	1.832	TCF4
TBX4,5.p2	1.831	TBX5 TBX4
EN1,2.p2	1.804	EN1 EN2
AGCUGCC	1.767
ALX1.p2	1.752	ALX1
IKZF1.p2	1.747	IKZF1
HBP1_HMGB_SSRP1_UBTF.p2	1.730	HMGB2 HMGB3 SSRP1 UBTF HBP1
HES1.p2	1.673	HES1
AGUGCAA	1.665
AAUACUG	1.645
RUNX1..3.p2	1.597	RUNX1 RUNX3 RUNX2
FOX{D1,D2}.p2	1.581	FOXD2 FOXD1
PAX2.p2	1.461	PAX2
CUACAGU	1.451
DBP.p2	1.433	DBP
NR1H4.p2	1.357	NR1H4
NKX2-1,4.p2	1.342	NKX2-1 NKX2-4
TLX1..3_NFIC{dimer}.p2	1.325	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
RXR{A,B,G}.p2	1.325	RXRA RXRB RXRG
AAGUGCU	1.301
FEV.p2	1.286	FEV
CTCF.p2	1.272	CTCF
RORA.p2	1.268	RORA
SOX2.p2	1.253	SOX2
NR4A2.p2	1.244	NR4A2
ESRRA.p2	1.240	ESRRA
STAT1,3.p3	1.219	STAT1 STAT3
ZNF423.p2	1.213	ZNF423
NFE2L1.p2	1.196	NFE2L1
UAAGACG	1.185
SREBF1,2.p2	1.184	SREBF1 SREBF2
LEF1_TCF7_TCF7L1,2.p2	1.180	TCF7 TCF7L2 LEF1 TCF7L1
UUGGCAC	1.169
STAT2,4,6.p2	1.131	STAT2 STAT4 STAT6
FOX{F1,F2,J1}.p2	1.102	FOXF2 FOXJ1 FOXF1
AUUGCAC	1.101
GAGAUGA	1.097
GFI1.p2	1.065	GFI1
NANOG{mouse}.p2	1.034	NANOG
GUGCAAA	1.008
RXRA_VDR{dimer}.p2	1.007	VDR	$logo of RXRA_VDR{dimer}.p2$
GATA6.p2	1.004	GATA6
PRRX1,2.p2	0.995	PRRX2 PRRX1
MAZ.p2	0.988	MAZ
GUCAGUU	0.971
CCCUGAG	0.952
IKZF2.p2	0.929	IKZF2
CGUGUCU	0.914
ACAUUCA	0.908
NR3C1.p2	0.907	NR3C1
TFEB.p2	0.903	TFEB
SP1.p2	0.880	SP1
ACCCUGU	0.868
AR.p2	0.850	AR
UCCCUUU	0.841
HSF1,2.p2	0.812	HSF1 HSF2
AGCAGCA	0.803
NFIL3.p2	0.793	NFIL3
GLI1..3.p2	0.789	GLI1 GLI2 GLI3
PAX4.p2	0.789	PAX4
CAGUGCA	0.776
AGGUAGU	0.742
LHX3,4.p2	0.733	LHX3 LHX4
NFIX.p2	0.733	NFIX
ATF6.p2	0.728	ATF6
CUX2.p2	0.727	CUX2
UGUGCGU	0.722
PAX6.p2	0.706	PAX6
NKX2-3_NKX2-5.p2	0.701	NKX2-5 NKX2-3
TEAD1.p2	0.689	TEAD1 TEAD2 TEAD3 TEAD4
CEBPA,B_DDIT3.p2	0.670	DDIT3 CEBPA CEBPB
UAAGACU	0.649
AGCAGCG	0.633
GUAAACA	0.632
POU1F1.p2	0.608	POU1F1
MYFfamily.p2	0.600	MYOD1 MYF6 MYF5 MYOG
PAX3,7.p2	0.585	PAX7 PAX3
HNF4A_NR2F1,2.p2	0.581	NR2F1 NR2F2 HNF4A
GGACGGA	0.541
PDX1.p2	0.528	PDX1
POU5F1_SOX2{dimer}.p2	0.508	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GAUAUGU	0.493
CDC5L.p2	0.486	CDC5L
UGAAAUG	0.470
HNF1A.p2	0.461	HNF1A
GAGAACU	0.431
STAT5{A,B}.p2	0.424	STAT5B STAT5A
NR6A1.p2	0.421	NR6A1
AACGGAA	0.415
AUGACAC	0.369
TLX2.p2	0.318	TLX2
AGCACCA	0.314
FOXO1,3,4.p2	0.301	FOXO1 FOXO4 FOXO3
PAX8.p2	0.286	PAX8
HOXA9_MEIS1.p2	0.276	MEIS1 HOXA9
HMX1.p2	0.276	HMX1
NKX3-1.p2	0.269	NKX3-1
ARID5B.p2	0.215	ARID5B
ACUGCAU	0.192
FOX{C1,C2}.p2	0.186	FOXC1 FOXC2
GGAGUGU	0.182
HLF.p2	0.172	HLF
ETS1,2.p2	0.156	ETS2 ETS1
AIRE.p2	0.128	AIRE
UGCAUUG	0.126
GZF1.p2	0.125	GZF1
CGUACCG	0.107
POU3F1..4.p2	0.078	POU3F1 POU3F3 POU3F2 POU3F4
UGACCUA	0.055
AAUGCCC	0.035
AACCUGG	0.023
NANOG.p2	0.013	NANOG
MSX1,2.p2	-0.001	MSX1 MSX2
AAUCUCA	-0.005
GAUCAGA	-0.009
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.011	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ZNF238.p2	-0.045	ZNF238
ACCCGUA	-0.054
EWSR1-FLI1.p2	-0.068	FLI1 EWSR1
PATZ1.p2	-0.099	PATZ1
T.p2	-0.106	T
EOMES.p2	-0.138	EOMES
GCAGCAU	-0.144
AACCGUU	-0.154
ZEB1.p2	-0.175	ZEB1
POU6F1.p2	-0.189	POU6F1
GAUUGUC	-0.195
CCAGUGU	-0.226
ONECUT1,2.p2	-0.227	ONECUT2 ONECUT1
AAUCUCU	-0.246
NKX6-1,2.p2	-0.296	NKX6-1 NKX6-2
GGCAAGA	-0.333
VSX1,2.p2	-0.339	VSX2 VSX1
TFAP2{A,C}.p2	-0.340	TFAP2C TFAP2A
CRX.p2	-0.426	CRX
CCUUCAU	-0.444
ZNF384.p2	-0.480	ZNF384
AACACUG	-0.521
TBP.p2	-0.591	TBP
AUGUGCC	-0.627
GUAGUGU	-0.641
UCACAGU	-0.661
MYBL2.p2	-0.750	MYBL2
TFAP2B.p2	-0.774	TFAP2B
ATF4.p2	-0.812	ATF4
ESR1.p2	-0.819	ESR1
NKX3-2.p2	-0.829	NKX3-2
FOXL1.p2	-0.839	FOXL1
POU2F1..3.p2	-0.841	POU2F2 POU2F1 POU2F3
HMGA1,2.p2	-0.880	HMGA1 HMGA2
HOX{A4,D4}.p2	-0.895	HOXA4 HOXD4
GFI1B.p2	-1.019	GFI1B
UUGUUCG	-1.078
FOXQ1.p2	-1.079	FOXQ1
NFATC1..3.p2	-1.093	NFATC3 NFATC2 NFATC1
FOSL2.p2	-1.109	FOSL2
GAGGUAG	-1.110
AAGGUGC	-1.137
CDX1,2,4.p2	-1.138	CDX1 CDX2 CDX4
AUGGCAC	-1.138
BPTF.p2	-1.146	BPTF
PRDM1.p3	-1.150	PRDM1
NFE2.p2	-1.189	NFE2
NFE2L2.p2	-1.222	NFE2L2
ZBTB16.p2	-1.224	ZBTB16
GGAAUGU	-1.252
UAAUGCU	-1.275
SOX5.p2	-1.296	SOX5
BACH2.p2	-1.330	BACH2
AGCUUAU	-1.411
PBX1.p2	-1.422	PBX1
CREB1.p2	-1.435	CREB1
RBPJ.p2	-1.439	RBPJ
TP53.p2	-1.466	TP53
UCCAGUU	-1.516
ACAGUAU	-1.548
ADNP_IRX_SIX_ZHX.p2	-1.563	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
SOX17.p2	-1.564	SOX17
PITX1..3.p2	-1.572	PITX2 PITX3 PITX1
SPIB.p2	-1.588	SPIB
ACAGUAC	-1.591
FOXA2.p3	-1.591	FOXA2
PPARG.p2	-1.625	PPARG
NKX2-2,8.p2	-1.745	NKX2-2 NKX2-8
UCACAUU	-1.749
FOXN1.p2	-1.806	FOXN1
UUGGCAA	-1.861
EP300.p2	-1.915	EP300
RXRG_dimer.p3	-1.960	NR1H2 RXRA PPARG PPARA RXRB RXRG
FOXD3.p2	-2.024	FOXD3
PAX5.p2	-2.107	PAX5
GUAACAG	-2.160
AGUGGUU	-2.181
ZNF143.p2	-2.296	ZNF143
NRF1.p2	-2.338	NRF1
SRF.p3	-2.371	SRF
ZNF148.p2	-2.389	ZNF148
bHLH_family.p2	-2.416	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
TFAP4.p2	-2.519	TFAP4
DMAP1_NCOR{1,2}_SMARC.p2	-2.579	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
IRF1,2,7.p3	-2.621	IRF1 IRF2 IRF7
AHR_ARNT_ARNT2.p2	-2.642	ARNT AHR ARNT2
HIF1A.p2	-2.679	HIF1A
NFKB1_REL_RELA.p2	-2.957	RELA REL NFKB1
UCAAGUA	-3.156
CUUUGGU	-3.398
XBP1.p3	-3.807	XBP1
ELK1,4_GABP{A,B1}.p3	-3.836	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
SPI1.p2	-3.918	SPI1
ATF5_CREB3.p2	-3.998	ATF5 CREB3
E2F1..5.p2	-4.007	E2F4 E2F5 E2F2 E2F1 E2F3
MYB.p2	-4.248	MYB
KLF4.p3	-4.330	KLF4
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-4.978	ARNT MAX MYC USF1 BHLHB2 ARNT2
EHF.p2	-5.022	EHF
TFDP1.p2	-5.148	TFDP1
YY1.p2	-5.327	YY1
ELF1,2,4.p2	-5.652	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	-5.734	NFYC NFYB NFYA
AAGGCAC	-7.013

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Sample name: GNF_1_CerebellumPeduncles

Sorted z-values for every WM.