ISMARA results: GNF_1_CingulateCortex

Sample name: GNF_1_CingulateCortex

Sorted Z-values histogram for the sample GNF_1_CingulateCortex

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
CUCCCAA	7.540
REST.p3	6.563	REST
KLF12.p2	6.386	KLF12
RFX1..5_RFXANK_RFXAP.p2	5.729	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
JUN.p2	4.994	JUN JUND JUNB
RREB1.p2	4.987	RREB1
HIC1.p2	4.925	HIC1
GGCAGUG	4.708
MTF1.p2	4.649	MTF1
GATA1..3.p2	4.495	GATA1 GATA2 GATA3
UGUGCUU	4.476
MYOD1.p2	4.304	MYOD1
CAGCAGG	4.173
TCF4_dimer.p2	4.119	TCF4
TGIF1.p2	4.088	TGIF1
GGCUCAG	4.035
NHLH1,2.p2	3.787	NHLH1 NHLH2
TFCP2.p2	3.708	TFCP2
EBF1.p2	3.664	EBF1
EVI1.p2	3.416	EVI1
SMAD1..7,9.p2	3.410	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
UGCAUAG	3.301
GTF2I.p2	3.197	GTF2I
FEV.p2	3.142	FEV
ZIC1..3.p2	3.048	ZIC1 ZIC2 ZIC3
NKX2-3_NKX2-5.p2	2.935	NKX2-5 NKX2-3
POU5F1.p2	2.818	POU5F1
FOX{I1,J2}.p2	2.763	FOXI1 FOXJ2
AUUGCAC	2.616
GTF2A1,2.p2	2.615	GTF2A1 GTF2A2
HOX{A6,A7,B6,B7}.p2	2.607	HOXB6 HOXA7 HOXB7 HOXA6
TAL1_TCF{3,4,12}.p2	2.589	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
ALX1.p2	2.581	ALX1
EGR1..3.p2	2.510	EGR3 EGR1 EGR2
ATF2.p2	2.450	ATF2
HAND1,2.p2	2.439	HAND1 HAND2
HNF4A_NR2F1,2.p2	2.354	NR2F1 NR2F2 HNF4A
MAZ.p2	2.350	MAZ
SPZ1.p2	2.272	SPZ1
IKZF1.p2	2.236	IKZF1
MEF2{A,B,C,D}.p2	2.204	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
MZF1.p2	2.183	MZF1
AAAGUGC	2.183
GLI1..3.p2	2.147	GLI1 GLI2 GLI3
TBX4,5.p2	2.122	TBX5 TBX4
TLX1..3_NFIC{dimer}.p2	2.106	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
STAT2,4,6.p2	2.058	STAT2 STAT4 STAT6
FOXP3.p2	2.031	FOXP3
HOX{A5,B5}.p2	2.012	HOXB5 HOXA5
NR1H4.p2	2.009	NR1H4
MYFfamily.p2	1.992	MYOD1 MYF6 MYF5 MYOG
IKZF2.p2	1.915	IKZF2
UCCCUUU	1.813
DBP.p2	1.778	DBP
CCCUGAG	1.687
CACAGUG	1.601
CCAGCAU	1.578
SOX{8,9,10}.p2	1.532	SOX9 SOX8 SOX10
ZFP161.p2	1.520	ZFP161
RUNX1..3.p2	1.502	RUNX1 RUNX3 RUNX2
GUGCAAA	1.498
GGCAAGA	1.463
RXR{A,B,G}.p2	1.458	RXRA RXRB RXRG
GGAAGAC	1.447
AUGGCUU	1.441
NANOG{mouse}.p2	1.433	NANOG
STAT1,3.p3	1.427	STAT1 STAT3
EWSR1-FLI1.p2	1.424	FLI1 EWSR1
PAX2.p2	1.424	PAX2
SP1.p2	1.406	SP1
GATA6.p2	1.405	GATA6
GAGAACU	1.386
EN1,2.p2	1.383	EN1 EN2
UUUUUGC	1.364
GUCAGUU	1.347
AGCUGCC	1.334
SNAI1..3.p2	1.267	SNAI2 SNAI1 SNAI3
ZBTB6.p2	1.242	ZBTB6
NR5A1,2.p2	1.209	NR5A1 NR5A2
UAUUGCU	1.206
NR3C1.p2	1.192	NR3C1
LEF1_TCF7_TCF7L1,2.p2	1.173	TCF7 TCF7L2 LEF1 TCF7L1
UUGGCAC	1.171
GUAAACA	1.162
ESRRA.p2	1.154	ESRRA
RXRA_VDR{dimer}.p2	1.141	VDR	$logo of RXRA_VDR{dimer}.p2$
UUGGUCC	1.138
AAGUGCU	1.122
CGUGUCU	1.099
AGCAGCG	1.097
GCUGGUG	1.075
NKX2-1,4.p2	1.049	NKX2-1 NKX2-4
MAFB.p2	1.040	MAFB
GAGAUGA	1.036
SRY.p2	1.003	SRY
PRRX1,2.p2	1.003	PRRX2 PRRX1
AGCAGCA	0.999
HBP1_HMGB_SSRP1_UBTF.p2	0.992	HMGB2 HMGB3 SSRP1 UBTF HBP1
RORA.p2	0.933	RORA
NR4A2.p2	0.925	NR4A2
PAX4.p2	0.896	PAX4
GFI1.p2	0.890	GFI1
LHX3,4.p2	0.808	LHX3 LHX4
PAX6.p2	0.773	PAX6
HMX1.p2	0.773	HMX1
LMO2.p2	0.734	LMO2
TFEB.p2	0.720	TFEB
CUACAGU	0.708
HLF.p2	0.705	HLF
GAUCAGA	0.700
NFE2L1.p2	0.662	NFE2L1
FOXL1.p2	0.627	FOXL1
HMGA1,2.p2	0.623	HMGA1 HMGA2
NFIL3.p2	0.593	NFIL3
UAAGACG	0.593
AACAGUC	0.587
SOX5.p2	0.584	SOX5
CUX2.p2	0.579	CUX2
ZEB1.p2	0.571	ZEB1
ZNF423.p2	0.553	ZNF423
FOS_FOS{B,L1}_JUN{B,D}.p2	0.542	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
ESR1.p2	0.530	ESR1
TLX2.p2	0.522	TLX2
NFE2.p2	0.515	NFE2
SREBF1,2.p2	0.513	SREBF1 SREBF2
STAT5{A,B}.p2	0.492	STAT5B STAT5A
FOX{F1,F2,J1}.p2	0.454	FOXF2 FOXJ1 FOXF1
GZF1.p2	0.442	GZF1
ACUGGCC	0.442
GCAGCAU	0.435
AGUGCAA	0.433
UGUGCGU	0.428
ACCCUGU	0.425
AAUACUG	0.416
CTCF.p2	0.409	CTCF
POU1F1.p2	0.402	POU1F1
GGACGGA	0.386
UGCAUUG	0.385
AR.p2	0.383	AR
UCACAGU	0.378
CGUACCG	0.363
SOX2.p2	0.337	SOX2
TEAD1.p2	0.335	TEAD1 TEAD2 TEAD3 TEAD4
NANOG.p2	0.314	NANOG
TFAP2B.p2	0.307	TFAP2B
AUGACAC	0.273
PDX1.p2	0.263	PDX1
HNF1A.p2	0.253	HNF1A
ETS1,2.p2	0.212	ETS2 ETS1
MSX1,2.p2	0.208	MSX1 MSX2
NR6A1.p2	0.189	NR6A1
FOXO1,3,4.p2	0.168	FOXO1 FOXO4 FOXO3
UAAGACU	0.158
CDC5L.p2	0.158	CDC5L
GCUACAU	0.155
PAX8.p2	0.145	PAX8
AACGGAA	0.141
CAGUGCA	0.140
NKX3-1.p2	0.120	NKX3-1
ACAUUCA	0.119
GFI1B.p2	0.114	GFI1B
PAX3,7.p2	0.108	PAX7 PAX3
AAUCUCU	0.089
HOXA9_MEIS1.p2	0.083	MEIS1 HOXA9
TFAP2{A,C}.p2	0.035	TFAP2C TFAP2A
NFIX.p2	0.017	NFIX
ACUGCAU	-0.002
NFATC1..3.p2	-0.002	NFATC3 NFATC2 NFATC1
POU5F1_SOX2{dimer}.p2	-0.005	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
AAGGUGC	-0.005
UGAAAUG	-0.028
ACCCGUA	-0.045
AAUCUCA	-0.054
FOX{D1,D2}.p2	-0.059	FOXD2 FOXD1
T.p2	-0.115	T
GUAACAG	-0.140
POU3F1..4.p2	-0.145	POU3F1 POU3F3 POU3F2 POU3F4
AACCGUU	-0.164
POU6F1.p2	-0.191	POU6F1
FOX{C1,C2}.p2	-0.198	FOXC1 FOXC2
NKX6-1,2.p2	-0.208	NKX6-1 NKX6-2
UUGUUCG	-0.219
CEBPA,B_DDIT3.p2	-0.220	DDIT3 CEBPA CEBPB
ZNF384.p2	-0.223	ZNF384
UGACCUA	-0.230
CRX.p2	-0.237	CRX
FOSL2.p2	-0.259	FOSL2
AIRE.p2	-0.262	AIRE
VSX1,2.p2	-0.265	VSX2 VSX1
MYBL2.p2	-0.281	MYBL2
GAUUGUC	-0.287
RBPJ.p2	-0.290	RBPJ
ZNF238.p2	-0.293	ZNF238
POU2F1..3.p2	-0.374	POU2F2 POU2F1 POU2F3
CCAGUGU	-0.375
ARID5B.p2	-0.380	ARID5B
GAUAUGU	-0.407
EOMES.p2	-0.495	EOMES
CCUUCAU	-0.502
GGAGUGU	-0.542
GAGGUAG	-0.600
HSF1,2.p2	-0.627	HSF1 HSF2
AACCUGG	-0.632
AGGUAGU	-0.648
FOXQ1.p2	-0.662	FOXQ1
IRF1,2,7.p3	-0.752	IRF1 IRF2 IRF7
ATF6.p2	-0.764	ATF6
TFAP4.p2	-0.767	TFAP4
AGCACCA	-0.787
AAUGCCC	-0.827
AGUGGUU	-0.892
HOX{A4,D4}.p2	-0.935	HOXA4 HOXD4
AACACUG	-0.940
CDX1,2,4.p2	-0.971	CDX1 CDX2 CDX4
HES1.p2	-1.009	HES1
ACAGUAC	-1.053
NKX3-2.p2	-1.090	NKX3-2
UUGGCAA	-1.127
ADNP_IRX_SIX_ZHX.p2	-1.147	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
UCACAUU	-1.147
NKX2-2,8.p2	-1.158	NKX2-2 NKX2-8
AUGGCAC	-1.181
AGCUUAU	-1.188
FOXA2.p3	-1.251	FOXA2
GUAGUGU	-1.336
PITX1..3.p2	-1.371	PITX2 PITX3 PITX1
PBX1.p2	-1.384	PBX1
AUGUGCC	-1.412
PATZ1.p2	-1.448	PATZ1
PAX5.p2	-1.566	PAX5
PRDM1.p3	-1.587	PRDM1
PPARG.p2	-1.659	PPARG
DMAP1_NCOR{1,2}_SMARC.p2	-1.687	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
NFE2L2.p2	-1.721	NFE2L2
CUUUGGU	-1.733
ONECUT1,2.p2	-1.753	ONECUT2 ONECUT1
UAAUGCU	-1.846
ACAGUAU	-1.882
FOXN1.p2	-1.900	FOXN1
UCCAGUU	-1.937
TP53.p2	-2.060	TP53
UCAAGUA	-2.083
RXRG_dimer.p3	-2.095	NR1H2 RXRA PPARG PPARA RXRB RXRG
SRF.p3	-2.177	SRF
CREB1.p2	-2.196	CREB1
FOXD3.p2	-2.319	FOXD3
ATF4.p2	-2.328	ATF4
BPTF.p2	-2.346	BPTF
TBP.p2	-2.384	TBP
ZBTB16.p2	-2.390	ZBTB16
SOX17.p2	-2.416	SOX17
BACH2.p2	-2.448	BACH2
GGAAUGU	-2.460
ZNF148.p2	-2.547	ZNF148
EP300.p2	-2.553	EP300
KLF4.p3	-2.836	KLF4
AHR_ARNT_ARNT2.p2	-2.869	ARNT AHR ARNT2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.066	ARNT MAX MYC USF1 BHLHB2 ARNT2
ZNF143.p2	-3.433	ZNF143
SPIB.p2	-3.516	SPIB
XBP1.p3	-3.704	XBP1
bHLH_family.p2	-3.720	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
SPI1.p2	-3.919	SPI1
HIF1A.p2	-4.054	HIF1A
NFKB1_REL_RELA.p2	-4.196	RELA REL NFKB1
ATF5_CREB3.p2	-4.223	ATF5 CREB3
AAGGCAC	-4.552
EHF.p2	-4.729	EHF
E2F1..5.p2	-5.211	E2F4 E2F5 E2F2 E2F1 E2F3
NRF1.p2	-5.377	NRF1
ELK1,4_GABP{A,B1}.p3	-5.474	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
MYB.p2	-5.703	MYB
ELF1,2,4.p2	-6.604	ELF2 ELF1 ELF4
NFY{A,B,C}.p2	-6.721	NFYC NFYB NFYA
TFDP1.p2	-6.854	TFDP1
YY1.p2	-10.968	YY1

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Sample name: GNF_1_CingulateCortex

Sorted z-values for every WM.