ISMARA results: GNF_1

Sample name: GNF_1_Lung

Sorted Z-values histogram for the sample GNF_1_Lung

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
TBP.p2	7.405	TBP
HIC1.p2	5.290	HIC1
POU2F1..3.p2	5.188	POU2F2 POU2F1 POU2F3
TFCP2.p2	5.170	TFCP2
FOSL2.p2	4.715	FOSL2
ETS1,2.p2	4.363	ETS2 ETS1
TLX1..3_NFIC{dimer}.p2	4.257	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ZNF148.p2	4.057	ZNF148
MYFfamily.p2	3.797	MYOD1 MYF6 MYF5 MYOG
HNF4A_NR2F1,2.p2	3.788	NR2F1 NR2F2 HNF4A
NFIX.p2	3.596	NFIX
GTF2A1,2.p2	3.585	GTF2A1 GTF2A2
AR.p2	3.568	AR
KLF12.p2	3.376	KLF12
ESR1.p2	3.337	ESR1
CAGCAGG	3.313
HAND1,2.p2	3.285	HAND1 HAND2
RUNX1..3.p2	3.088	RUNX1 RUNX3 RUNX2
EP300.p2	3.084	EP300
GLI1..3.p2	3.027	GLI1 GLI2 GLI3
FEV.p2	2.996	FEV
NR3C1.p2	2.989	NR3C1
TGIF1.p2	2.920	TGIF1
TEAD1.p2	2.858	TEAD1 TEAD2 TEAD3 TEAD4
CCCUGAG	2.798
STAT2,4,6.p2	2.787	STAT2 STAT4 STAT6
NFKB1_REL_RELA.p2	2.757	RELA REL NFKB1
SP1.p2	2.728	SP1
SMAD1..7,9.p2	2.635	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
RXRA_VDR{dimer}.p2	2.536	VDR	$logo of RXRA_VDR{dimer}.p2$
AAGGCAC	2.511
NR5A1,2.p2	2.452	NR5A1 NR5A2
SRF.p3	2.433	SRF
SPIB.p2	2.428	SPIB
PPARG.p2	2.405	PPARG
GGCAGUG	2.403
POU5F1.p2	2.382	POU5F1
FOX{D1,D2}.p2	2.353	FOXD2 FOXD1
STAT1,3.p3	2.337	STAT1 STAT3
ZFP161.p2	2.290	ZFP161
HOX{A5,B5}.p2	2.163	HOXB5 HOXA5
ATF2.p2	2.022	ATF2
KLF4.p3	1.978	KLF4
TFEB.p2	1.945	TFEB
MEF2{A,B,C,D}.p2	1.934	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
TP53.p2	1.888	TP53
BACH2.p2	1.881	BACH2
FOXA2.p3	1.878	FOXA2
FOX{C1,C2}.p2	1.878	FOXC1 FOXC2
ZNF238.p2	1.798	ZNF238
RXR{A,B,G}.p2	1.759	RXRA RXRB RXRG
NR1H4.p2	1.697	NR1H4
NFE2L1.p2	1.639	NFE2L1
POU6F1.p2	1.625	POU6F1
NFATC1..3.p2	1.584	NFATC3 NFATC2 NFATC1
ZNF423.p2	1.582	ZNF423
NR6A1.p2	1.543	NR6A1
NHLH1,2.p2	1.538	NHLH1 NHLH2
JUN.p2	1.531	JUN JUND JUNB
PITX1..3.p2	1.498	PITX2 PITX3 PITX1
CCAGUGU	1.486
ZBTB6.p2	1.477	ZBTB6
PAX4.p2	1.438	PAX4
MYOD1.p2	1.384	MYOD1
CCAGCAU	1.356
AAAGUGC	1.331
ZEB1.p2	1.324	ZEB1
IRF1,2,7.p3	1.298	IRF1 IRF2 IRF7
TFAP4.p2	1.283	TFAP4
ADNP_IRX_SIX_ZHX.p2	1.259	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
AIRE.p2	1.255	AIRE
MAZ.p2	1.241	MAZ
MTF1.p2	1.220	MTF1
PRDM1.p3	1.215	PRDM1
HBP1_HMGB_SSRP1_UBTF.p2	1.212	HMGB2 HMGB3 SSRP1 UBTF HBP1
SNAI1..3.p2	1.196	SNAI2 SNAI1 SNAI3
GATA1..3.p2	1.189	GATA1 GATA2 GATA3
CTCF.p2	1.152	CTCF
FOXO1,3,4.p2	1.143	FOXO1 FOXO4 FOXO3
GGCUCAG	1.107
EBF1.p2	1.101	EBF1
CDX1,2,4.p2	1.081	CDX1 CDX2 CDX4
TFAP2{A,C}.p2	1.071	TFAP2C TFAP2A
GAUUGUC	1.059
T.p2	1.037	T
EOMES.p2	1.034	EOMES
NANOG{mouse}.p2	1.011	NANOG
GGAAGAC	0.999
SREBF1,2.p2	0.981	SREBF1 SREBF2
GGACGGA	0.976
RREB1.p2	0.954	RREB1
FOX{I1,J2}.p2	0.952	FOXI1 FOXJ2
ACCCUGU	0.905
NANOG.p2	0.904	NANOG
CDC5L.p2	0.897	CDC5L
TCF4_dimer.p2	0.886	TCF4
GFI1B.p2	0.885	GFI1B
NKX3-2.p2	0.855	NKX3-2
EN1,2.p2	0.842	EN1 EN2
FOX{F1,F2,J1}.p2	0.818	FOXF2 FOXJ1 FOXF1
AGCACCA	0.817
CEBPA,B_DDIT3.p2	0.779	DDIT3 CEBPA CEBPB
POU5F1_SOX2{dimer}.p2	0.774	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
HNF1A.p2	0.767	HNF1A
CUCCCAA	0.761
CRX.p2	0.757	CRX
CGUACCG	0.747
CUUUGGU	0.704
HOXA9_MEIS1.p2	0.657	MEIS1 HOXA9
UUGGCAC	0.647
ATF6.p2	0.646	ATF6
CGUGUCU	0.624
AUUGCAC	0.604
POU3F1..4.p2	0.581	POU3F1 POU3F3 POU3F2 POU3F4
GAUCAGA	0.573
UAAUGCU	0.572
UCCAGUU	0.538
GUGCAAA	0.484
AAGUGCU	0.483
AGCAGCG	0.457
GCUACAU	0.429
NKX2-3_NKX2-5.p2	0.427	NKX2-5 NKX2-3
ACAGUAC	0.410
TLX2.p2	0.372	TLX2
GGAGUGU	0.369
LMO2.p2	0.362	LMO2
AGCUUAU	0.332
VSX1,2.p2	0.318	VSX2 VSX1
HMX1.p2	0.318	HMX1
GUAGUGU	0.300
UGCAUUG	0.286
GATA6.p2	0.284	GATA6
AUGUGCC	0.280
ONECUT1,2.p2	0.257	ONECUT2 ONECUT1
DMAP1_NCOR{1,2}_SMARC.p2	0.256	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
PBX1.p2	0.249	PBX1
FOS_FOS{B,L1}_JUN{B,D}.p2	0.242	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
TAL1_TCF{3,4,12}.p2	0.207	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
IKZF1.p2	0.200	IKZF1
NFIL3.p2	0.193	NFIL3
MSX1,2.p2	0.183	MSX1 MSX2
AAGGUGC	0.179
PAX3,7.p2	0.174	PAX7 PAX3
CACAGUG	0.167
LHX3,4.p2	0.145	LHX3 LHX4
ARID5B.p2	0.133	ARID5B
AAUGCCC	0.130
PAX8.p2	0.111	PAX8
AACGGAA	0.099
ACUGGCC	0.066
EWSR1-FLI1.p2	0.059	FLI1 EWSR1
UGUGCGU	0.041
AGUGCAA	0.039
GGCAAGA	0.026
NR4A2.p2	-0.013	NR4A2
NFY{A,B,C}.p2	-0.014	NFYC NFYB NFYA
ACCCGUA	-0.018
RORA.p2	-0.039	RORA
GAGAACU	-0.056
NFE2.p2	-0.067	NFE2
UUGGCAA	-0.073
DBP.p2	-0.080	DBP
AACCUGG	-0.088
GZF1.p2	-0.097	GZF1
PDX1.p2	-0.100	PDX1
GAUAUGU	-0.107
UGACCUA	-0.122
POU1F1.p2	-0.162	POU1F1
GAGAUGA	-0.194
UGCAUAG	-0.231
XBP1.p3	-0.255	XBP1
HOX{A6,A7,B6,B7}.p2	-0.269	HOXB6 HOXA7 HOXB7 HOXA6
CUX2.p2	-0.271	CUX2
FOXP3.p2	-0.282	FOXP3
bHLH_family.p2	-0.313	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
CCUUCAU	-0.315
PATZ1.p2	-0.360	PATZ1
AAUCUCA	-0.363
UAAGACU	-0.380
NKX2-1,4.p2	-0.391	NKX2-1 NKX2-4
AUGGCAC	-0.400
PAX6.p2	-0.404	PAX6
AACCGUU	-0.411
UCCCUUU	-0.414
ACAGUAU	-0.433
LEF1_TCF7_TCF7L1,2.p2	-0.462	TCF7 TCF7L2 LEF1 TCF7L1
AGGUAGU	-0.463
RXRG_dimer.p3	-0.464	NR1H2 RXRA PPARG PPARA RXRB RXRG
NKX6-1,2.p2	-0.501	NKX6-1 NKX6-2
GUCAGUU	-0.554
ATF4.p2	-0.682	ATF4
GUAACAG	-0.719
SOX2.p2	-0.752	SOX2
AGUGGUU	-0.768
TFAP2B.p2	-0.777	TFAP2B
AGCUGCC	-0.809
AHR_ARNT_ARNT2.p2	-0.812	ARNT AHR ARNT2
AGCAGCA	-0.814
GCUGGUG	-0.819
CUACAGU	-0.830
NKX3-1.p2	-0.851	NKX3-1
AACAGUC	-0.857
REST.p3	-0.863	REST
EVI1.p2	-0.865	EVI1
AAUCUCU	-0.892
SOX5.p2	-0.931	SOX5
ACUGCAU	-0.960
AUGACAC	-0.992
HMGA1,2.p2	-1.040	HMGA1 HMGA2
UAUUGCU	-1.045
HIF1A.p2	-1.090	HIF1A
ZNF384.p2	-1.095	ZNF384
HSF1,2.p2	-1.095	HSF1 HSF2
UAAGACG	-1.108
UUGGUCC	-1.133
GAGGUAG	-1.213
SPZ1.p2	-1.234	SPZ1
HLF.p2	-1.286	HLF
SPI1.p2	-1.342	SPI1
CREB1.p2	-1.375	CREB1
FOXQ1.p2	-1.435	FOXQ1
TBX4,5.p2	-1.442	TBX5 TBX4
NKX2-2,8.p2	-1.444	NKX2-2 NKX2-8
UCACAGU	-1.479
ACAUUCA	-1.491
AAUACUG	-1.495
SOX{8,9,10}.p2	-1.499	SOX9 SOX8 SOX10
SRY.p2	-1.503	SRY
RFX1..5_RFXANK_RFXAP.p2	-1.509	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
ALX1.p2	-1.522	ALX1
RBPJ.p2	-1.529	RBPJ
FOXD3.p2	-1.597	FOXD3
BPTF.p2	-1.623	BPTF
SOX17.p2	-1.701	SOX17
HOX{A4,D4}.p2	-1.705	HOXA4 HOXD4
AUGGCUU	-1.766
GCAGCAU	-1.769
UUGUUCG	-1.770
GTF2I.p2	-1.868	GTF2I
NFE2L2.p2	-1.899	NFE2L2
MYBL2.p2	-1.928	MYBL2
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.953	ARNT MAX MYC USF1 BHLHB2 ARNT2
FOXN1.p2	-2.070	FOXN1
UCACAUU	-2.089
FOXL1.p2	-2.096	FOXL1
PAX5.p2	-2.108	PAX5
IKZF2.p2	-2.128	IKZF2
MZF1.p2	-2.132	MZF1
GGAAUGU	-2.140
EGR1..3.p2	-2.233	EGR3 EGR1 EGR2
HES1.p2	-2.279	HES1
CAGUGCA	-2.326
PAX2.p2	-2.430	PAX2
STAT5{A,B}.p2	-2.446	STAT5B STAT5A
ZIC1..3.p2	-2.758	ZIC1 ZIC2 ZIC3
ESRRA.p2	-2.848	ESRRA
ELF1,2,4.p2	-2.864	ELF2 ELF1 ELF4
GFI1.p2	-3.086	GFI1
UGUGCUU	-3.122
UGAAAUG	-3.408
EHF.p2	-3.490	EHF
AACACUG	-3.505
GUAAACA	-3.527
ZBTB16.p2	-3.946	ZBTB16
UUUUUGC	-3.969
YY1.p2	-4.084	YY1
ATF5_CREB3.p2	-4.374	ATF5 CREB3
ELK1,4_GABP{A,B1}.p3	-4.632	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
PRRX1,2.p2	-4.695	PRRX2 PRRX1
UCAAGUA	-4.714
ZNF143.p2	-4.824	ZNF143
MAFB.p2	-4.882	MAFB
TFDP1.p2	-5.215	TFDP1
NRF1.p2	-6.467	NRF1
MYB.p2	-7.809	MYB
E2F1..5.p2	-9.305	E2F4 E2F5 E2F2 E2F1 E2F3

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Sample name: GNF_1_Lung

Sorted z-values for every WM.