ISMARA results: GNF_1

Sample name: GNF_1_OccipitalLobe

Sorted Z-values histogram for the sample GNF_1_OccipitalLobe

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
RFX1..5_RFXANK_RFXAP.p2	7.380	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
REST.p3	5.964	REST
UGUGCUU	5.434
MAFB.p2	4.976	MAFB
CUCCCAA	4.869
MZF1.p2	4.868	MZF1
KLF12.p2	4.647	KLF12
HIC1.p2	4.478	HIC1
MYOD1.p2	4.336	MYOD1
HOX{A6,A7,B6,B7}.p2	4.319	HOXB6 HOXA7 HOXB7 HOXA6
JUN.p2	4.294	JUN JUND JUNB
TGIF1.p2	4.208	TGIF1
GTF2I.p2	4.096	GTF2I
ZIC1..3.p2	4.087	ZIC1 ZIC2 ZIC3
EGR1..3.p2	4.013	EGR3 EGR1 EGR2
GGCAGUG	3.780
FOX{I1,J2}.p2	3.677	FOXI1 FOXJ2
NHLH1,2.p2	3.653	NHLH1 NHLH2
POU5F1.p2	3.581	POU5F1
GATA1..3.p2	3.512	GATA1 GATA2 GATA3
SOX2.p2	3.327	SOX2
ZFP161.p2	3.273	ZFP161
UUUUUGC	3.168
AAUACUG	3.147
MTF1.p2	3.136	MTF1
RREB1.p2	3.125	RREB1
TAL1_TCF{3,4,12}.p2	3.076	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
TCF4_dimer.p2	3.061	TCF4
PAX2.p2	3.031	PAX2
MEF2{A,B,C,D}.p2	2.976	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
IKZF2.p2	2.947	IKZF2
DBP.p2	2.924	DBP
TBX4,5.p2	2.865	TBX5 TBX4
ATF2.p2	2.843	ATF2
GUGCAAA	2.741
GGAAGAC	2.633
GUCAGUU	2.625
ACAUUCA	2.618
PAX4.p2	2.586	PAX4
LMO2.p2	2.346	LMO2
TFCP2.p2	2.324	TFCP2
UUGGUCC	2.323
UAAGACG	2.323
NKX2-3_NKX2-5.p2	2.201	NKX2-5 NKX2-3
SOX{8,9,10}.p2	2.136	SOX9 SOX8 SOX10
ALX1.p2	2.113	ALX1
ZBTB6.p2	2.113	ZBTB6
GGCUCAG	2.090
ESRRA.p2	2.089	ESRRA
AUGGCUU	2.085
EVI1.p2	2.079	EVI1
FOXO1,3,4.p2	2.044	FOXO1 FOXO4 FOXO3
EWSR1-FLI1.p2	2.042	FLI1 EWSR1
GUAAACA	1.988
HAND1,2.p2	1.880	HAND1 HAND2
FOXP3.p2	1.805	FOXP3
UGCAUAG	1.760
SRY.p2	1.716	SRY
UCACAGU	1.673
GFI1.p2	1.626	GFI1
PRRX1,2.p2	1.620	PRRX2 PRRX1
CCAGCAU	1.614
GCUACAU	1.594
HOX{A5,B5}.p2	1.590	HOXB5 HOXA5
UCCCUUU	1.580
SREBF1,2.p2	1.546	SREBF1 SREBF2
CUACAGU	1.534
AGUGCAA	1.527
SMAD1..7,9.p2	1.512	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
TFEB.p2	1.492	TFEB
FOX{D1,D2}.p2	1.440	FOXD2 FOXD1
FEV.p2	1.424	FEV
GAGAACU	1.412
UGAAAUG	1.344
EBF1.p2	1.325	EBF1
AUUGCAC	1.316
NFIX.p2	1.308	NFIX
NR4A2.p2	1.292	NR4A2
SPZ1.p2	1.280	SPZ1
STAT2,4,6.p2	1.216	STAT2 STAT4 STAT6
NR3C1.p2	1.203	NR3C1
STAT1,3.p3	1.179	STAT1 STAT3
GLI1..3.p2	1.179	GLI1 GLI2 GLI3
GAUCAGA	1.154
UAUUGCU	1.138
CAGUGCA	1.116
AAAGUGC	1.113
NR5A1,2.p2	1.096	NR5A1 NR5A2
IKZF1.p2	1.070	IKZF1
UUGGCAC	1.037
GGCAAGA	1.009
CAGCAGG	0.973
GCUGGUG	0.965
STAT5{A,B}.p2	0.963	STAT5B STAT5A
UAAGACU	0.931
HMGA1,2.p2	0.922	HMGA1 HMGA2
TLX1..3_NFIC{dimer}.p2	0.916	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
SP1.p2	0.912	SP1
LEF1_TCF7_TCF7L1,2.p2	0.891	TCF7 TCF7L2 LEF1 TCF7L1
POU5F1_SOX2{dimer}.p2	0.869	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
AAGUGCU	0.856
CDC5L.p2	0.816	CDC5L
CUX2.p2	0.786	CUX2
NFIL3.p2	0.783	NFIL3
MAZ.p2	0.779	MAZ
AACAGUC	0.774
AACACUG	0.624
CACAGUG	0.610
AGCAGCG	0.604
NKX3-1.p2	0.578	NKX3-1
GTF2A1,2.p2	0.559	GTF2A1 GTF2A2
NFE2.p2	0.550	NFE2
PAX3,7.p2	0.549	PAX7 PAX3
ACUGCAU	0.543
ACUGGCC	0.527
HBP1_HMGB_SSRP1_UBTF.p2	0.499	HMGB2 HMGB3 SSRP1 UBTF HBP1
GAGAUGA	0.494
UGUGCGU	0.491
GZF1.p2	0.485	GZF1
HSF1,2.p2	0.456	HSF1 HSF2
SNAI1..3.p2	0.456	SNAI2 SNAI1 SNAI3
CEBPA,B_DDIT3.p2	0.451	DDIT3 CEBPA CEBPB
PAX6.p2	0.381	PAX6
FOXL1.p2	0.326	FOXL1
NR6A1.p2	0.316	NR6A1
RXR{A,B,G}.p2	0.303	RXRA RXRB RXRG
AGCAGCA	0.303
PDX1.p2	0.297	PDX1
GGAAUGU	0.267
CTCF.p2	0.263	CTCF
CDX1,2,4.p2	0.255	CDX1 CDX2 CDX4
GCAGCAU	0.243
TFAP2B.p2	0.224	TFAP2B
AUGACAC	0.214
AAUCUCU	0.207
HOXA9_MEIS1.p2	0.204	MEIS1 HOXA9
LHX3,4.p2	0.194	LHX3 LHX4
MYFfamily.p2	0.165	MYOD1 MYF6 MYF5 MYOG
ARID5B.p2	0.124	ARID5B
AACCGUU	0.102
CGUGUCU	0.085
PAX8.p2	0.068	PAX8
RXRA_VDR{dimer}.p2	0.066	VDR	$logo of RXRA_VDR{dimer}.p2$
GAUAUGU	0.050
ZEB1.p2	0.041	ZEB1
AR.p2	0.035	AR
UUGGCAA	0.035
SOX5.p2	0.031	SOX5
AACGGAA	0.030
FOX{F1,F2,J1}.p2	0.005	FOXF2 FOXJ1 FOXF1
NANOG{mouse}.p2	0.005	NANOG
NKX3-2.p2	0.000	NKX3-2
POU6F1.p2	-0.010	POU6F1
AUGGCAC	-0.028
UGCAUUG	-0.036
NKX6-1,2.p2	-0.038	NKX6-1 NKX6-2
PAX5.p2	-0.048	PAX5
NANOG.p2	-0.052	NANOG
POU3F1..4.p2	-0.058	POU3F1 POU3F3 POU3F2 POU3F4
NR1H4.p2	-0.065	NR1H4
ACCCGUA	-0.068
EN1,2.p2	-0.085	EN1 EN2
RORA.p2	-0.088	RORA
TEAD1.p2	-0.089	TEAD1 TEAD2 TEAD3 TEAD4
POU1F1.p2	-0.090	POU1F1
NFE2L1.p2	-0.108	NFE2L1
MYBL2.p2	-0.109	MYBL2
AGGUAGU	-0.111
NFATC1..3.p2	-0.113	NFATC3 NFATC2 NFATC1
MSX1,2.p2	-0.134	MSX1 MSX2
AACCUGG	-0.146
GGAGUGU	-0.154
ESR1.p2	-0.160	ESR1
ZNF423.p2	-0.170	ZNF423
HES1.p2	-0.172	HES1
GGACGGA	-0.172
NKX2-1,4.p2	-0.173	NKX2-1 NKX2-4
UGACCUA	-0.184
AAUCUCA	-0.184
AIRE.p2	-0.190	AIRE
AAGGUGC	-0.190
AGCUGCC	-0.203
CGUACCG	-0.205
VSX1,2.p2	-0.279	VSX2 VSX1
HLF.p2	-0.280	HLF
RUNX1..3.p2	-0.295	RUNX1 RUNX3 RUNX2
NFE2L2.p2	-0.321	NFE2L2
FOXN1.p2	-0.333	FOXN1
CRX.p2	-0.345	CRX
NKX2-2,8.p2	-0.365	NKX2-2 NKX2-8
EOMES.p2	-0.369	EOMES
HMX1.p2	-0.402	HMX1
ZNF384.p2	-0.419	ZNF384
GFI1B.p2	-0.435	GFI1B
ACCCUGU	-0.453
AGCUUAU	-0.522
CCUUCAU	-0.523
AAUGCCC	-0.536
UCCAGUU	-0.572
UUGUUCG	-0.652
TLX2.p2	-0.691	TLX2
ATF5_CREB3.p2	-0.695	ATF5 CREB3
FOS_FOS{B,L1}_JUN{B,D}.p2	-0.740	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
HOX{A4,D4}.p2	-0.747	HOXA4 HOXD4
GUAGUGU	-0.760
ETS1,2.p2	-0.761	ETS2 ETS1
T.p2	-0.780	T
FOX{C1,C2}.p2	-0.863	FOXC1 FOXC2
GUAACAG	-0.949
PBX1.p2	-0.961	PBX1
AGUGGUU	-1.008
PRDM1.p3	-1.054	PRDM1
HIF1A.p2	-1.066	HIF1A
FOSL2.p2	-1.071	FOSL2
ATF4.p2	-1.166	ATF4
UCACAUU	-1.171
GAUUGUC	-1.203
DMAP1_NCOR{1,2}_SMARC.p2	-1.285	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
RBPJ.p2	-1.299	RBPJ
CCAGUGU	-1.316
AUGUGCC	-1.323
ZNF238.p2	-1.404	ZNF238
ADNP_IRX_SIX_ZHX.p2	-1.434	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
UCAAGUA	-1.445
UAAUGCU	-1.465
PPARG.p2	-1.465	PPARG
BACH2.p2	-1.577	BACH2
ZBTB16.p2	-1.600	ZBTB16
GAGGUAG	-1.600
RXRG_dimer.p3	-1.601	NR1H2 RXRA PPARG PPARA RXRB RXRG
ACAGUAU	-1.639
HNF4A_NR2F1,2.p2	-1.671	NR2F1 NR2F2 HNF4A
ACAGUAC	-1.754
TFAP2{A,C}.p2	-1.763	TFAP2C TFAP2A
AGCACCA	-1.801
CCCUGAG	-1.825
ONECUT1,2.p2	-1.864	ONECUT2 ONECUT1
TBP.p2	-1.937	TBP
SPIB.p2	-1.943	SPIB
FOXQ1.p2	-1.969	FOXQ1
ATF6.p2	-1.977	ATF6
PATZ1.p2	-2.022	PATZ1
TFAP4.p2	-2.027	TFAP4
KLF4.p3	-2.033	KLF4
AHR_ARNT_ARNT2.p2	-2.071	ARNT AHR ARNT2
ZNF148.p2	-2.106	ZNF148
HNF1A.p2	-2.115	HNF1A
BPTF.p2	-2.182	BPTF
CREB1.p2	-2.291	CREB1
GATA6.p2	-2.401	GATA6
ZNF143.p2	-2.482	ZNF143
SRF.p3	-2.498	SRF
SOX17.p2	-2.540	SOX17
TP53.p2	-2.664	TP53
FOXA2.p3	-2.697	FOXA2
NRF1.p2	-2.781	NRF1
EHF.p2	-2.786	EHF
POU2F1..3.p2	-2.798	POU2F2 POU2F1 POU2F3
MYB.p2	-2.840	MYB
FOXD3.p2	-2.899	FOXD3
XBP1.p3	-3.174	XBP1
IRF1,2,7.p3	-3.205	IRF1 IRF2 IRF7
NFKB1_REL_RELA.p2	-3.222	RELA REL NFKB1
EP300.p2	-3.389	EP300
bHLH_family.p2	-3.532	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
CUUUGGU	-3.558
ELK1,4_GABP{A,B1}.p3	-3.571	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
PITX1..3.p2	-3.624	PITX2 PITX3 PITX1
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-3.789	ARNT MAX MYC USF1 BHLHB2 ARNT2
SPI1.p2	-4.666	SPI1
TFDP1.p2	-4.869	TFDP1
AAGGCAC	-5.365
YY1.p2	-5.470	YY1
ELF1,2,4.p2	-5.713	ELF2 ELF1 ELF4
E2F1..5.p2	-5.794	E2F4 E2F5 E2F2 E2F1 E2F3
NFY{A,B,C}.p2	-7.152	NFYC NFYB NFYA

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Sample name: GNF_1_OccipitalLobe

Sorted z-values for every WM.