ISMARA results: GNF_1

Sample name: GNF_1_Ovary

Sorted Z-values histogram for the sample GNF_1_Ovary

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
UUUUUGC	5.832
TBP.p2	4.559	TBP
SRF.p3	4.440	SRF
GATA1..3.p2	3.740	GATA1 GATA2 GATA3
CUCCCAA	3.562
GTF2I.p2	3.303	GTF2I
MYFfamily.p2	3.147	MYOD1 MYF6 MYF5 MYOG
FOX{D1,D2}.p2	3.082	FOXD2 FOXD1
ZNF384.p2	3.002	ZNF384
HBP1_HMGB_SSRP1_UBTF.p2	2.978	HMGB2 HMGB3 SSRP1 UBTF HBP1
RREB1.p2	2.954	RREB1
TLX1..3_NFIC{dimer}.p2	2.896	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ATF6.p2	2.883	ATF6
TFCP2.p2	2.850	TFCP2
AHR_ARNT_ARNT2.p2	2.748	ARNT AHR ARNT2
MTF1.p2	2.711	MTF1
GATA6.p2	2.594	GATA6
TEAD1.p2	2.523	TEAD1 TEAD2 TEAD3 TEAD4
TFAP4.p2	2.483	TFAP4
FOXA2.p3	2.387	FOXA2
TLX2.p2	2.346	TLX2
GTF2A1,2.p2	2.345	GTF2A1 GTF2A2
NANOG{mouse}.p2	2.304	NANOG
STAT2,4,6.p2	2.198	STAT2 STAT4 STAT6
NFIX.p2	2.179	NFIX
EVI1.p2	2.148	EVI1
STAT1,3.p3	2.142	STAT1 STAT3
GAGGUAG	2.140
MYOD1.p2	2.086	MYOD1
RXR{A,B,G}.p2	1.978	RXRA RXRB RXRG
AAAGUGC	1.901
TCF4_dimer.p2	1.884	TCF4
CUUUGGU	1.874
CACAGUG	1.862
SMAD1..7,9.p2	1.850	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
POU1F1.p2	1.814	POU1F1
MYBL2.p2	1.715	MYBL2
PPARG.p2	1.692	PPARG
SPIB.p2	1.664	SPIB
PRRX1,2.p2	1.627	PRRX2 PRRX1
UCCCUUU	1.600
HAND1,2.p2	1.580	HAND1 HAND2
MAZ.p2	1.560	MAZ
LEF1_TCF7_TCF7L1,2.p2	1.539	TCF7 TCF7L2 LEF1 TCF7L1
KLF12.p2	1.514	KLF12
NR1H4.p2	1.509	NR1H4
AGCAGCA	1.509
MZF1.p2	1.485	MZF1
UUGUUCG	1.480
MSX1,2.p2	1.466	MSX1 MSX2
FOXO1,3,4.p2	1.463	FOXO1 FOXO4 FOXO3
HNF1A.p2	1.461	HNF1A
ZNF423.p2	1.400	ZNF423
AAUACUG	1.355
POU3F1..4.p2	1.301	POU3F1 POU3F3 POU3F2 POU3F4
HOX{A5,B5}.p2	1.276	HOXB5 HOXA5
UAAGACU	1.261
POU2F1..3.p2	1.251	POU2F2 POU2F1 POU2F3
FOXL1.p2	1.246	FOXL1
TBX4,5.p2	1.241	TBX5 TBX4
UGAAAUG	1.231
EN1,2.p2	1.228	EN1 EN2
JUN.p2	1.215	JUN JUND JUNB
CREB1.p2	1.200	CREB1
AGGUAGU	1.164
AGCUGCC	1.161
FOS_FOS{B,L1}_JUN{B,D}.p2	1.140	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
TGIF1.p2	1.074	TGIF1
UAAUGCU	1.061
UGCAUAG	1.061
NR6A1.p2	1.055	NR6A1
AGCUUAU	1.049
AUGACAC	1.034
VSX1,2.p2	1.023	VSX2 VSX1
CGUGUCU	0.995
HMGA1,2.p2	0.965	HMGA1 HMGA2
PRDM1.p3	0.951	PRDM1
CCAGCAU	0.935
GAGAACU	0.933
NKX2-1,4.p2	0.919	NKX2-1 NKX2-4
REST.p3	0.918	REST
ALX1.p2	0.903	ALX1
PAX6.p2	0.884	PAX6
AAUCUCU	0.832
PDX1.p2	0.813	PDX1
GAUCAGA	0.802
HMX1.p2	0.763	HMX1
POU5F1_SOX2{dimer}.p2	0.763	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
EGR1..3.p2	0.757	EGR3 EGR1 EGR2
HSF1,2.p2	0.749	HSF1 HSF2
HIC1.p2	0.736	HIC1
PAX2.p2	0.736	PAX2
AACACUG	0.724
GGCUCAG	0.718
AR.p2	0.699	AR
RXRA_VDR{dimer}.p2	0.697	VDR	$logo of RXRA_VDR{dimer}.p2$
GUAGUGU	0.695
ACCCUGU	0.691
GAGAUGA	0.688
EP300.p2	0.677	EP300
ACAGUAU	0.630
RBPJ.p2	0.617	RBPJ
UAAGACG	0.591
FOXP3.p2	0.575	FOXP3
XBP1.p3	0.564	XBP1
ZIC1..3.p2	0.547	ZIC1 ZIC2 ZIC3
ZNF238.p2	0.536	ZNF238
CUACAGU	0.511
PAX8.p2	0.501	PAX8
ACUGGCC	0.489
ATF2.p2	0.483	ATF2
CDX1,2,4.p2	0.469	CDX1 CDX2 CDX4
GUCAGUU	0.449
NKX3-1.p2	0.438	NKX3-1
NFKB1_REL_RELA.p2	0.424	RELA REL NFKB1
POU5F1.p2	0.421	POU5F1
CAGCAGG	0.404
GGAAGAC	0.401
FOX{I1,J2}.p2	0.374	FOXI1 FOXJ2
RORA.p2	0.369	RORA
POU6F1.p2	0.361	POU6F1
NR3C1.p2	0.360	NR3C1
GGACGGA	0.348
GGCAGUG	0.348
GZF1.p2	0.335	GZF1
NFIL3.p2	0.335	NFIL3
ETS1,2.p2	0.332	ETS2 ETS1
AAUGCCC	0.331
UGUGCUU	0.312
FEV.p2	0.310	FEV
ESR1.p2	0.292	ESR1
AAUCUCA	0.283
AACCUGG	0.280
AUGGCUU	0.265
ONECUT1,2.p2	0.257	ONECUT2 ONECUT1
NFE2L1.p2	0.225	NFE2L1
RXRG_dimer.p3	0.223	NR1H2 RXRA PPARG PPARA RXRB RXRG
AIRE.p2	0.217	AIRE
DBP.p2	0.217	DBP
CAGUGCA	0.213
AGUGCAA	0.208
NFATC1..3.p2	0.196	NFATC3 NFATC2 NFATC1
UUGGUCC	0.191
UUGGCAC	0.189
GGCAAGA	0.185
SRY.p2	0.168	SRY
ACUGCAU	0.166
GLI1..3.p2	0.160	GLI1 GLI2 GLI3
AAGUGCU	0.157
NFE2.p2	0.153	NFE2
IKZF2.p2	0.144	IKZF2
EBF1.p2	0.142	EBF1
AGUGGUU	0.116
GFI1.p2	0.115	GFI1
AUGUGCC	0.112
CCAGUGU	0.100
SNAI1..3.p2	0.093	SNAI2 SNAI1 SNAI3
CGUACCG	0.089
GGAGUGU	0.073
CEBPA,B_DDIT3.p2	0.057	DDIT3 CEBPA CEBPB
GAUUGUC	0.053
PAX3,7.p2	0.051	PAX7 PAX3
HNF4A_NR2F1,2.p2	0.041	NR2F1 NR2F2 HNF4A
UUGGCAA	0.008
AAGGCAC	0.008
ZBTB16.p2	-0.004	ZBTB16
NKX2-3_NKX2-5.p2	-0.008	NKX2-5 NKX2-3
FOX{C1,C2}.p2	-0.036	FOXC1 FOXC2
TAL1_TCF{3,4,12}.p2	-0.040	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
RUNX1..3.p2	-0.042	RUNX1 RUNX3 RUNX2
SPZ1.p2	-0.046	SPZ1
ACCCGUA	-0.052
PITX1..3.p2	-0.057	PITX2 PITX3 PITX1
CDC5L.p2	-0.059	CDC5L
UGUGCGU	-0.070
MEF2{A,B,C,D}.p2	-0.076	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
NKX6-1,2.p2	-0.127	NKX6-1 NKX6-2
GUAAACA	-0.129
CCCUGAG	-0.136
NKX3-2.p2	-0.162	NKX3-2
UCCAGUU	-0.163
ZNF148.p2	-0.171	ZNF148
GUAACAG	-0.178
UGACCUA	-0.184
TFAP2{A,C}.p2	-0.189	TFAP2C TFAP2A
AGCAGCG	-0.204
CCUUCAU	-0.220
SOX17.p2	-0.224	SOX17
TFEB.p2	-0.228	TFEB
HLF.p2	-0.241	HLF
AUUGCAC	-0.265
GAUAUGU	-0.268
AACCGUU	-0.281
NANOG.p2	-0.281	NANOG
CUX2.p2	-0.287	CUX2
T.p2	-0.294	T
STAT5{A,B}.p2	-0.294	STAT5B STAT5A
LHX3,4.p2	-0.297	LHX3 LHX4
AAGGUGC	-0.317
FOX{F1,F2,J1}.p2	-0.411	FOXF2 FOXJ1 FOXF1
UAUUGCU	-0.417
AACGGAA	-0.423
GCUACAU	-0.426
UGCAUUG	-0.499
IKZF1.p2	-0.522	IKZF1
NHLH1,2.p2	-0.552	NHLH1 NHLH2
ADNP_IRX_SIX_ZHX.p2	-0.596	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
CRX.p2	-0.625	CRX
SOX5.p2	-0.627	SOX5
SPI1.p2	-0.628	SPI1
ZBTB6.p2	-0.629	ZBTB6
ACAUUCA	-0.755
UCACAGU	-0.781
EWSR1-FLI1.p2	-0.798	FLI1 EWSR1
HOXA9_MEIS1.p2	-0.821	MEIS1 HOXA9
ZEB1.p2	-0.835	ZEB1
ACAGUAC	-0.868
PATZ1.p2	-0.885	PATZ1
EOMES.p2	-0.894	EOMES
FOSL2.p2	-0.910	FOSL2
GFI1B.p2	-0.943	GFI1B
TP53.p2	-0.957	TP53
FOXD3.p2	-0.965	FOXD3
AACAGUC	-0.968
UCACAUU	-0.973
FOXN1.p2	-0.983	FOXN1
NR5A1,2.p2	-1.011	NR5A1 NR5A2
EHF.p2	-1.015	EHF
DMAP1_NCOR{1,2}_SMARC.p2	-1.070	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
ZFP161.p2	-1.127	ZFP161
AGCACCA	-1.130
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-1.154	ARNT MAX MYC USF1 BHLHB2 ARNT2
GCAGCAU	-1.159
HOX{A6,A7,B6,B7}.p2	-1.193	HOXB6 HOXA7 HOXB7 HOXA6
FOXQ1.p2	-1.215	FOXQ1
AUGGCAC	-1.218
BACH2.p2	-1.236	BACH2
SREBF1,2.p2	-1.249	SREBF1 SREBF2
RFX1..5_RFXANK_RFXAP.p2	-1.309	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
TFDP1.p2	-1.319	TFDP1
HOX{A4,D4}.p2	-1.467	HOXA4 HOXD4
ARID5B.p2	-1.508	ARID5B
IRF1,2,7.p3	-1.667	IRF1 IRF2 IRF7
PAX4.p2	-1.705	PAX4
NR4A2.p2	-1.791	NR4A2
UCAAGUA	-1.856
GCUGGUG	-1.864
NKX2-2,8.p2	-1.929	NKX2-2 NKX2-8
BPTF.p2	-1.955	BPTF
MAFB.p2	-1.971	MAFB
bHLH_family.p2	-2.010	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
CTCF.p2	-2.069	CTCF
GUGCAAA	-2.098
LMO2.p2	-2.106	LMO2
ATF5_CREB3.p2	-2.107	ATF5 CREB3
SP1.p2	-2.123	SP1
KLF4.p3	-2.311	KLF4
ATF4.p2	-2.448	ATF4
SOX2.p2	-2.483	SOX2
TFAP2B.p2	-2.655	TFAP2B
SOX{8,9,10}.p2	-2.825	SOX9 SOX8 SOX10
PBX1.p2	-2.872	PBX1
ELF1,2,4.p2	-3.051	ELF2 ELF1 ELF4
HIF1A.p2	-3.180	HIF1A
HES1.p2	-3.222	HES1
PAX5.p2	-3.387	PAX5
NFE2L2.p2	-3.623	NFE2L2
GGAAUGU	-3.833
ESRRA.p2	-4.789	ESRRA
E2F1..5.p2	-5.465	E2F4 E2F5 E2F2 E2F1 E2F3
NFY{A,B,C}.p2	-6.178	NFYC NFYB NFYA
MYB.p2	-6.866	MYB
ZNF143.p2	-6.980	ZNF143
ELK1,4_GABP{A,B1}.p3	-7.749	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
YY1.p2	-8.917	YY1
NRF1.p2	-9.420	NRF1

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Sample name: GNF_1_Ovary

Sorted z-values for every WM.