ISMARA results: GNF_1

Sample name: GNF_1_PB-CD4+Tcells

Sorted Z-values histogram for the sample GNF_1_PB-CD4+Tcells

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
YY1.p2	5.992	YY1
SPI1.p2	5.625	SPI1
ELK1,4_GABP{A,B1}.p3	5.555	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
RUNX1..3.p2	5.484	RUNX1 RUNX3 RUNX2
ELF1,2,4.p2	4.777	ELF2 ELF1 ELF4
SPIB.p2	4.660	SPIB
NRF1.p2	4.624	NRF1
FOX{D1,D2}.p2	4.313	FOXD2 FOXD1
IRF1,2,7.p3	4.208	IRF1 IRF2 IRF7
ZBTB16.p2	4.146	ZBTB16
CREB1.p2	4.032	CREB1
ZNF143.p2	3.841	ZNF143
MAZ.p2	3.455	MAZ
NFKB1_REL_RELA.p2	3.328	RELA REL NFKB1
DMAP1_NCOR{1,2}_SMARC.p2	3.246	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
GGAAUGU	2.943
NKX2-2,8.p2	2.936	NKX2-2 NKX2-8
ETS1,2.p2	2.813	ETS2 ETS1
PAX2.p2	2.773	PAX2
HOX{A4,D4}.p2	2.746	HOXA4 HOXD4
CCCUGAG	2.711
SOX5.p2	2.505	SOX5
AIRE.p2	2.307	AIRE
AUGGCAC	2.280
ACAUUCA	2.265
PITX1..3.p2	2.169	PITX2 PITX3 PITX1
GCAGCAU	2.117
CUX2.p2	2.077	CUX2
PRDM1.p3	2.056	PRDM1
MAFB.p2	1.915	MAFB
RXRA_VDR{dimer}.p2	1.875	VDR	$logo of RXRA_VDR{dimer}.p2$
HMX1.p2	1.796	HMX1
RXRG_dimer.p3	1.781	NR1H2 RXRA PPARG PPARA RXRB RXRG
HES1.p2	1.756	HES1
NKX3-2.p2	1.740	NKX3-2
AAGUGCU	1.646
GAGAUGA	1.626
CDX1,2,4.p2	1.591	CDX1 CDX2 CDX4
AGCUUAU	1.503
UCACAUU	1.461
GLI1..3.p2	1.442	GLI1 GLI2 GLI3
LMO2.p2	1.437	LMO2
TBX4,5.p2	1.437	TBX5 TBX4
NFY{A,B,C}.p2	1.407	NFYC NFYB NFYA
PPARG.p2	1.397	PPARG
HOXA9_MEIS1.p2	1.393	MEIS1 HOXA9
RORA.p2	1.381	RORA
SNAI1..3.p2	1.378	SNAI2 SNAI1 SNAI3
CUCCCAA	1.334
GGCUCAG	1.328
CTCF.p2	1.323	CTCF
FOX{C1,C2}.p2	1.323	FOXC1 FOXC2
PATZ1.p2	1.287	PATZ1
AHR_ARNT_ARNT2.p2	1.280	ARNT AHR ARNT2
AUGUGCC	1.275
POU1F1.p2	1.257	POU1F1
AAGGUGC	1.151
LHX3,4.p2	1.136	LHX3 LHX4
TGIF1.p2	1.132	TGIF1
NFE2.p2	1.126	NFE2
MYBL2.p2	1.110	MYBL2
KLF4.p3	1.091	KLF4
STAT5{A,B}.p2	1.059	STAT5B STAT5A
FOXL1.p2	1.010	FOXL1
ZFP161.p2	1.007	ZFP161
ALX1.p2	1.007	ALX1
FEV.p2	1.007	FEV
ACAGUAC	0.954
TLX2.p2	0.935	TLX2
NR1H4.p2	0.923	NR1H4
AAAGUGC	0.919
ATF5_CREB3.p2	0.907	ATF5 CREB3
FOX{F1,F2,J1}.p2	0.885	FOXF2 FOXJ1 FOXF1
SREBF1,2.p2	0.838	SREBF1 SREBF2
UCAAGUA	0.830
AGCUGCC	0.813
RBPJ.p2	0.802	RBPJ
NKX6-1,2.p2	0.761	NKX6-1 NKX6-2
NKX2-1,4.p2	0.733	NKX2-1 NKX2-4
ZNF148.p2	0.701	ZNF148
CDC5L.p2	0.698	CDC5L
NFE2L2.p2	0.684	NFE2L2
ZNF423.p2	0.647	ZNF423
ONECUT1,2.p2	0.641	ONECUT2 ONECUT1
GCUGGUG	0.632
GAUUGUC	0.627
EOMES.p2	0.603	EOMES
PAX4.p2	0.598	PAX4
FOXP3.p2	0.565	FOXP3
AACCGUU	0.518
UUGGCAC	0.505
CAGUGCA	0.466
FOXD3.p2	0.466	FOXD3
ACUGGCC	0.454
TFAP2B.p2	0.450	TFAP2B
CAGCAGG	0.439
POU5F1.p2	0.433	POU5F1
HSF1,2.p2	0.431	HSF1 HSF2
FOXN1.p2	0.414	FOXN1
FOXQ1.p2	0.411	FOXQ1
TFAP4.p2	0.403	TFAP4
HNF4A_NR2F1,2.p2	0.333	NR2F1 NR2F2 HNF4A
AGUGCAA	0.288
HBP1_HMGB_SSRP1_UBTF.p2	0.260	HMGB2 HMGB3 SSRP1 UBTF HBP1
TFDP1.p2	0.242	TFDP1
AGGUAGU	0.223
SRY.p2	0.219	SRY
IKZF2.p2	0.215	IKZF2
NR3C1.p2	0.214	NR3C1
BPTF.p2	0.206	BPTF
GZF1.p2	0.200	GZF1
PRRX1,2.p2	0.174	PRRX2 PRRX1
UAAUGCU	0.174
PBX1.p2	0.173	PBX1
UGUGCGU	0.169
SOX17.p2	0.161	SOX17
TAL1_TCF{3,4,12}.p2	0.144	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
AAUCUCA	0.127
UGACCUA	0.122
GATA6.p2	0.118	GATA6
UGCAUUG	0.105
HAND1,2.p2	0.064	HAND1 HAND2
T.p2	0.060	T
GGAAGAC	0.052
UAAGACU	0.051
ESRRA.p2	0.045	ESRRA
EGR1..3.p2	0.026	EGR3 EGR1 EGR2
ACCCUGU	-0.017
GFI1B.p2	-0.020	GFI1B
GGCAGUG	-0.027
PAX8.p2	-0.052	PAX8
SPZ1.p2	-0.058	SPZ1
ACAGUAU	-0.063
ACCCGUA	-0.064
CUUUGGU	-0.084
PDX1.p2	-0.099	PDX1
EHF.p2	-0.105	EHF
AUGGCUU	-0.106
CCAGUGU	-0.141
AUUGCAC	-0.146
UCACAGU	-0.153
ZBTB6.p2	-0.161	ZBTB6
AAGGCAC	-0.175
PAX3,7.p2	-0.175	PAX7 PAX3
POU6F1.p2	-0.177	POU6F1
UGCAUAG	-0.180
ZEB1.p2	-0.191	ZEB1
GAUAUGU	-0.219
EN1,2.p2	-0.221	EN1 EN2
GUAACAG	-0.264
AUGACAC	-0.269
DBP.p2	-0.271	DBP
AGCAGCG	-0.275
POU2F1..3.p2	-0.287	POU2F2 POU2F1 POU2F3
AGCAGCA	-0.291
UUUUUGC	-0.297
TFEB.p2	-0.307	TFEB
GGACGGA	-0.318
UAUUGCU	-0.326
AAUCUCU	-0.331
SMAD1..7,9.p2	-0.334	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
AACCUGG	-0.335
UAAGACG	-0.336
GUGCAAA	-0.379
ARID5B.p2	-0.383	ARID5B
MYB.p2	-0.391	MYB
CGUACCG	-0.442
JUN.p2	-0.444	JUN JUND JUNB
AACAGUC	-0.452
GUAAACA	-0.457
AGCACCA	-0.468
HNF1A.p2	-0.473	HNF1A
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-0.473	ARNT MAX MYC USF1 BHLHB2 ARNT2
PAX6.p2	-0.496	PAX6
GCUACAU	-0.511
HIC1.p2	-0.513	HIC1
AAUGCCC	-0.522
CRX.p2	-0.575	CRX
CGUGUCU	-0.594
AACGGAA	-0.605
AR.p2	-0.609	AR
ADNP_IRX_SIX_ZHX.p2	-0.638	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
ZNF238.p2	-0.652	ZNF238
CCUUCAU	-0.653
NANOG.p2	-0.655	NANOG
NFIX.p2	-0.658	NFIX
GGAGUGU	-0.660
UUGGCAA	-0.661
CCAGCAU	-0.681
HLF.p2	-0.687	HLF
AACACUG	-0.696
KLF12.p2	-0.736	KLF12
bHLH_family.p2	-0.740	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
TFCP2.p2	-0.783	TFCP2
GUCAGUU	-0.789
ACUGCAU	-0.802
E2F1..5.p2	-0.849	E2F4 E2F5 E2F2 E2F1 E2F3
GUAGUGU	-0.880
ATF4.p2	-0.900	ATF4
EP300.p2	-0.907	EP300
NKX3-1.p2	-0.943	NKX3-1
EBF1.p2	-0.969	EBF1
GGCAAGA	-0.988
VSX1,2.p2	-0.994	VSX2 VSX1
SOX2.p2	-1.046	SOX2
HOX{A5,B5}.p2	-1.082	HOXB5 HOXA5
FOSL2.p2	-1.084	FOSL2
GAUCAGA	-1.092
NHLH1,2.p2	-1.095	NHLH1 NHLH2
EVI1.p2	-1.127	EVI1
POU5F1_SOX2{dimer}.p2	-1.169	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
GAGAACU	-1.204
CEBPA,B_DDIT3.p2	-1.205	DDIT3 CEBPA CEBPB
MSX1,2.p2	-1.220	MSX1 MSX2
BACH2.p2	-1.268	BACH2
NFIL3.p2	-1.306	NFIL3
TFAP2{A,C}.p2	-1.314	TFAP2C TFAP2A
NFATC1..3.p2	-1.329	NFATC3 NFATC2 NFATC1
POU3F1..4.p2	-1.340	POU3F1 POU3F3 POU3F2 POU3F4
GFI1.p2	-1.340	GFI1
UCCCUUU	-1.342
GATA1..3.p2	-1.370	GATA1 GATA2 GATA3
FOX{I1,J2}.p2	-1.380	FOXI1 FOXJ2
SP1.p2	-1.382	SP1
NANOG{mouse}.p2	-1.397	NANOG
CACAGUG	-1.409
EWSR1-FLI1.p2	-1.411	FLI1 EWSR1
UUGUUCG	-1.440
NKX2-3_NKX2-5.p2	-1.559	NKX2-5 NKX2-3
MTF1.p2	-1.560	MTF1
GAGGUAG	-1.575
ATF6.p2	-1.613	ATF6
AGUGGUU	-1.626
UUGGUCC	-1.657
MEF2{A,B,C,D}.p2	-1.657	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
GTF2I.p2	-1.702	GTF2I
ZNF384.p2	-1.715	ZNF384
CUACAGU	-1.716
UGUGCUU	-1.728
RXR{A,B,G}.p2	-1.740	RXRA RXRB RXRG
NR6A1.p2	-1.757	NR6A1
PAX5.p2	-1.812	PAX5
GTF2A1,2.p2	-1.819	GTF2A1 GTF2A2
LEF1_TCF7_TCF7L1,2.p2	-1.824	TCF7 TCF7L2 LEF1 TCF7L1
FOXO1,3,4.p2	-1.836	FOXO1 FOXO4 FOXO3
UCCAGUU	-1.847
HIF1A.p2	-1.847	HIF1A
MYFfamily.p2	-1.850	MYOD1 MYF6 MYF5 MYOG
TP53.p2	-1.919	TP53
ATF2.p2	-1.919	ATF2
STAT2,4,6.p2	-1.924	STAT2 STAT4 STAT6
STAT1,3.p3	-1.949	STAT1 STAT3
FOS_FOS{B,L1}_JUN{B,D}.p2	-1.984	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
NR5A1,2.p2	-2.258	NR5A1 NR5A2
SRF.p3	-2.364	SRF
ZIC1..3.p2	-2.389	ZIC1 ZIC2 ZIC3
MYOD1.p2	-2.415	MYOD1
AAUACUG	-2.450
RREB1.p2	-2.460	RREB1
TCF4_dimer.p2	-2.478	TCF4
FOXA2.p3	-2.556	FOXA2
SOX{8,9,10}.p2	-2.574	SOX9 SOX8 SOX10
MZF1.p2	-2.605	MZF1
NR4A2.p2	-2.628	NR4A2
TEAD1.p2	-2.748	TEAD1 TEAD2 TEAD3 TEAD4
HMGA1,2.p2	-2.775	HMGA1 HMGA2
UGAAAUG	-2.996
NFE2L1.p2	-3.025	NFE2L1
IKZF1.p2	-3.070	IKZF1
REST.p3	-3.113	REST
XBP1.p3	-3.149	XBP1
TLX1..3_NFIC{dimer}.p2	-3.157	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
ESR1.p2	-3.953	ESR1
RFX1..5_RFXANK_RFXAP.p2	-5.062	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
HOX{A6,A7,B6,B7}.p2	-5.374	HOXB6 HOXA7 HOXB7 HOXA6
TBP.p2	-5.786	TBP

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Sample name: GNF_1_PB-CD4+Tcells

Sorted z-values for every WM.